RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 STBD1O95210 358 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 EIF4BP23588 611 aaKnown RBP18.2■□□□□ 0.5
SNX27-202ENST00000368841 ATP5F1P24539 256 aaPredicted RBP18.2■□□□□ 0.5
SNX27-202ENST00000368841 PPP2R2BQ00005 443 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 NDUFA5Q16718 116 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 GPR158Q5T848 1215 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 OR7A2PQ8NGA2 310 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 PIH1D2Q8WWB5 315 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 COPS4Q9BT78 406 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 DNTTP04053 509 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 FUT4P22083 530 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 TAS2R40P59535 323 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 RFWD3Q6PCD5 774 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 INTS7Q9NVH2 962 aaKnown RBP18.2■□□□□ 0.5
SNX27-202ENST00000368841 A0A1W2PPM1 405 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 RFXANKO14593 260 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 NRLP54845 237 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 CAPSQ13938 189 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 USP41Q3LFD5 358 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 PABPC1LQ4VXU2 614 aaKnown RBP18.2■□□□□ 0.5
SNX27-202ENST00000368841 LRRC49Q8IUZ0 686 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 OR4L1Q8NH43 312 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 STARD8Q92502 1023 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 KLK6Q92876 244 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 TMLHEQ9NVH6 421 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 TNPO3Q9Y5L0 923 aaKnown RBP18.2■□□□□ 0.5
SNX27-202ENST00000368841 NRCAMQ92823 1304 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 PRKAR2AP13861 404 aaKnown RBP18.2■□□□□ 0.5
SNX27-202ENST00000368841 MYL9P24844 172 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 PSME3P61289 254 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.2■□□□□ 0.5
SNX27-202ENST00000368841 CADM2Q8N3J6 435 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 RACGAP1Q9H0H5 632 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 FAM198AQ9UFP1 575 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 PSME2Q9UL46 239 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 MAP4K5Q9Y4K4 846 aa18.2■□□□□ 0.5
SNX27-202ENST00000368841 CXCL11O14625 94 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 ZNF143P52747 638 aaPredicted RBP18.19■□□□□ 0.5
SNX27-202ENST00000368841 LGALS3BPQ08380 585 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 BAP1Q92560 729 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 ZFRQ96KR1 1074 aaKnown RBP18.19■□□□□ 0.5
SNX27-202ENST00000368841 CCL22O00626 93 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 DCLK1O15075 740 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 TTPAP49638 278 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 CASP9P55211 416 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 PRKG2Q13237 762 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 CNPY4Q8N129 248 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 STK32AQ8WU08 396 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 PRODHO43272 600 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 MAGEC1O60732 1142 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 DBIP07108 87 aaKnown RBP18.19■□□□□ 0.5
SNX27-202ENST00000368841 ICAM3P32942 547 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 YAP1P46937 504 aaKnown RBP18.19■□□□□ 0.5
SNX27-202ENST00000368841 PRKAA2P54646 552 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 PCDH1Q08174 1060 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 PEX6Q13608 980 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 FIGNQ5HY92 759 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 STX12Q86Y82 276 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 L2HGDHQ9H9P8 463 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 PTPRJQ12913 1337 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 ECDO95905 644 aaPredicted RBP18.19■□□□□ 0.5
SNX27-202ENST00000368841 BMP7P18075 431 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 TRIM40Q6P9F5 258 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 CATSPERGQ6ZRH7 1159 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 TRPV3Q8NET8 790 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 EPS8L1Q8TE68 723 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 GPER1Q99527 375 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 SPAG4Q9NPE6 437 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 SNX15Q9NRS6 342 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 XPR1Q9UBH6 696 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 STARP49675 285 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 TRPM4Q8TD43 1214 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 AENQ8WTP8 325 aaKnown RBP18.19■□□□□ 0.5
SNX27-202ENST00000368841 KCNS3Q9BQ31 491 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 ZNF490Q9ULM2 529 aaPredicted RBP18.19■□□□□ 0.5
SNX27-202ENST00000368841 MAP2P11137 1827 aaKnown RBP18.19■□□□□ 0.5
SNX27-202ENST00000368841 HTR1BP28222 390 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 CHN2P52757 468 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 CARTPTQ16568 116 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 ZPBP2Q6X784 338 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 TSPAN14Q8NG11 270 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 EBPLQ9BY08 206 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 CDT1Q9H211 546 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 PRDM12Q9H4Q4 367 aa18.19■□□□□ 0.5
SNX27-202ENST00000368841 HECAQ9UBI9 543 aaPredicted RBP18.19■□□□□ 0.5
SNX27-202ENST00000368841 G3V2T6 193 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 MAT2AP31153 395 aaKnown RBP18.18■□□□□ 0.5
SNX27-202ENST00000368841 MSLNQ13421 630 aaPredicted RBP18.18■□□□□ 0.5
SNX27-202ENST00000368841 MZT2BQ6NZ67 158 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 CREG2Q8IUH2 290 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 RASSF1Q9NS23 344 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 SIRPGQ9P1W8 387 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 RPS6KA6Q9UK32 745 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 PAGE1O75459 146 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 KCNJ2P63252 427 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 SLC20A2Q08357 652 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 IL17AQ16552 155 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 ZFP1Q6P2D0 407 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 OTOP2Q7RTS6 562 aa18.18■□□□□ 0.5
SNX27-202ENST00000368841 NKAPQ8N5F7 415 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms