RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 SPATS1Q496A3 300 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 UNC50Q53HI1 259 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 MS4A13Q5J8X5 152 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 SIRPB2Q5JXA9 342 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 MRNIPQ6NTE8 343 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 BORAQ6PGQ7 559 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 PAOXQ6QHF9 649 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 CXCL17Q6UXB2 119 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 PTAR1Q7Z6K3 402 aaPredicted RBP14.32□□□□□ -0.12
CD48-201ENST00000368045 RAB44Q7Z6P3 723 aaPredicted RBP14.32□□□□□ -0.12
CD48-201ENST00000368045 NUP93Q8N1F7 819 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 GOLM1Q8NBJ4 401 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 HASPINQ8TF76 798 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 ATP6V1E2Q96A05 226 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 EME1Q96AY2 570 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 PHF21BQ96EK2 531 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 C19orf60Q96EN9 201 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 BTN2A3PQ96KV6 586 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 CNBD2Q96M20 576 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 CYP2S1Q96SQ9 504 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 OSBPL11Q9BXB4 747 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 ALG9Q9H6U8 611 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 SPC25Q9HBM1 224 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 RGS18Q9NS28 235 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 CCDC167Q9P0B6 97 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 J3KR12 359 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 UBFD1O14562 309 aaKnown RBP14.32□□□□□ -0.12
CD48-201ENST00000368045 PGM3O95394 542 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 EPOP01588 193 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 FGF1P05230 155 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 ATXN1LP0C7T5 689 aaKnown RBP14.32□□□□□ -0.12
CD48-201ENST00000368045 PSMC3P17980 439 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 HLA-DPA1P20036 260 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 TCN1P20061 433 aaPredicted RBP14.32□□□□□ -0.12
CD48-201ENST00000368045 CDKL1Q00532 357 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 SLC10A7Q0GE19 358 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 MTA1Q13330 715 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 TAF1CQ15572 869 aaPredicted RBP14.32□□□□□ -0.12
CD48-201ENST00000368045 PPP1R3AQ16821 1122 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 SLC39A12Q504Y0 691 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 C6orf52Q5T4I8 152 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 GPR158Q5T848 1215 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 C17orf99Q6UX52 265 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 SCN4BQ8IWT1 228 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 RHEBL1Q8TAI7 183 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 ARRDC2Q8TBH0 407 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 PABPC5Q96DU9 382 aaKnown RBP14.32□□□□□ -0.12
CD48-201ENST00000368045 FEM1CQ96JP0 617 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 TRIM15Q9C019 465 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 OLA1Q9NTK5 396 aaKnown RBP14.32□□□□□ -0.12
CD48-201ENST00000368045 THEGQ9P2T0 379 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 NDUFAF1Q9Y375 327 aa14.32□□□□□ -0.12
CD48-201ENST00000368045 PTPRDP23468 1912 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 PRORSD1PA6NEY8 169 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 DRGXA6NNA5 263 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 TMEM189-UBE2V1I3L0A0 370 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 LDB2O43679 373 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 SUPT7LO94864 414 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 OAZ2O95190 189 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 GLP2RO95838 553 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 HAPLN1P10915 354 aaPredicted RBP14.31□□□□□ -0.12
CD48-201ENST00000368045 CD1DP15813 335 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 OGNP20774 298 aaKnown RBP14.31□□□□□ -0.12
CD48-201ENST00000368045 GPX3P22352 226 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 THPOP40225 353 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 PBX3P40426 434 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 MAGEA11P43364 429 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 ARSDP51689 593 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 PLK1P53350 603 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 NR1H2P55055 460 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 YBEYP58557 167 aaPredicted RBP14.31□□□□□ -0.12
CD48-201ENST00000368045 NAA20P61599 178 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 TRIP4Q15650 581 aaPredicted RBP14.31□□□□□ -0.12
CD48-201ENST00000368045 SLC5A9Q2M3M2 681 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 UGT3A2Q3SY77 523 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 TMEM207Q6UWW9 146 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 CYHR1Q6ZMK1 362 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 TFAP2DQ7Z6R9 452 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 ZNF598Q86UK7 904 aaKnown RBP14.31□□□□□ -0.12
CD48-201ENST00000368045 CHERPQ8IWX8 916 aaKnown RBP14.31□□□□□ -0.12
CD48-201ENST00000368045 GALNT4Q8N4A0 578 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 FAM156AQ8NDB6 213 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 ZUFSPQ96AP4 578 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 ADAM2Q99965 735 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 HOPXQ9BPY8 73 aaPredicted RBP14.31□□□□□ -0.12
CD48-201ENST00000368045 HAUS8Q9BT25 410 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 ARMC1Q9NVT9 282 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 IL37Q9NZH6 218 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 MARCH4Q9P2E8 410 aaPredicted RBP14.31□□□□□ -0.12
CD48-201ENST00000368045 UXTQ9UBK9 157 aaPredicted RBP14.31□□□□□ -0.12
CD48-201ENST00000368045 DMTF1Q9Y222 760 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 NYNRINQ9P2P1 1898 aaKnown RBP14.31□□□□□ -0.12
CD48-201ENST00000368045 SCN10AQ9Y5Y9 1956 aa14.31□□□□□ -0.12
CD48-201ENST00000368045 NLRC5Q86WI3 1866 aa14.3□□□□□ -0.12
CD48-201ENST00000368045 ARHGAP10A1A4S6 786 aa14.3□□□□□ -0.12
CD48-201ENST00000368045 VPS4BO75351 444 aa14.3□□□□□ -0.12
CD48-201ENST00000368045 RPP40O75818 363 aaKnown RBP14.3□□□□□ -0.12
CD48-201ENST00000368045 ITGB1P05556 798 aa14.3□□□□□ -0.12
CD48-201ENST00000368045 MAPKAPK2P49137 400 aa14.3□□□□□ -0.12
CD48-201ENST00000368045 ATXN3P54252 364 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms