RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 TSPAN33Q86UF1 283 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 NT5DC3Q86UY8 548 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 GALNT15Q8N3T1 639 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 CNTD1Q8N815 330 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 MFSD2AQ8NA29 543 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 EXD1Q8NHP7 514 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 KLHDC7BQ96G42 594 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 BMFQ96LC9 184 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 TSGA13Q96PP4 275 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 C1QTNF2Q9BXJ5 285 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 LZTFL1Q9NQ48 299 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 CHKBQ9Y259 395 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 RAXQ9Y2V3 346 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.73□□□□□ -0.05
SF3B5-201ENST00000367569 COL5A1P20908 1838 aaPredicted RBP14.73□□□□□ -0.05
SF3B5-201ENST00000367569 BAHCC1Q9P281 2608 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 SCN8AQ9UQD0 1980 aa14.73□□□□□ -0.05
SF3B5-201ENST00000367569 TRABD2BA6NFA1 517 aa14.72□□□□□ -0.05
SF3B5-201ENST00000367569 NPIPB15A6NHN6 443 aaPredicted RBP14.72□□□□□ -0.05
SF3B5-201ENST00000367569 LZTS3O60299 673 aaPredicted RBP14.72□□□□□ -0.05
SF3B5-201ENST00000367569 SOCS5O75159 536 aa14.72□□□□□ -0.05
SF3B5-201ENST00000367569 PGLSO95336 258 aa14.72□□□□□ -0.05
SF3B5-201ENST00000367569 SLC4A1P02730 911 aa14.72□□□□□ -0.05
SF3B5-201ENST00000367569 ITGAVP06756 1048 aa14.72□□□□□ -0.05
SF3B5-201ENST00000367569 ELFN1P0C7U0 828 aa14.72□□□□□ -0.05
SF3B5-201ENST00000367569 LHCGRP22888 699 aa14.72□□□□□ -0.05
SF3B5-201ENST00000367569 CTNNA2P26232 953 aa14.72□□□□□ -0.05
SF3B5-201ENST00000367569 IFI35P80217 286 aaPredicted RBP14.72□□□□□ -0.05
SF3B5-201ENST00000367569 BNIP3Q12983 259 aa14.72□□□□□ -0.05
SF3B5-201ENST00000367569 DNAJC3Q13217 504 aa14.72□□□□□ -0.05
SF3B5-201ENST00000367569 TFDP2Q14188 446 aa14.72□□□□□ -0.05
SF3B5-201ENST00000367569 GALNT3Q14435 633 aa14.72□□□□□ -0.05
SF3B5-201ENST00000367569 PDK1Q15118 436 aa14.72□□□□□ -0.05
SF3B5-201ENST00000367569 PRKD1Q15139 912 aaPredicted RBP14.72□□□□□ -0.05
SF3B5-201ENST00000367569 CNGA3Q16281 694 aa14.72□□□□□ -0.05
SF3B5-201ENST00000367569 PCSK7Q16549 785 aa14.72□□□□□ -0.05
SF3B5-201ENST00000367569 KYAT3Q6YP21 454 aaKnown RBP14.72□□□□□ -0.05
SF3B5-201ENST00000367569 KDELC2Q7Z4H8 507 aa14.72□□□□□ -0.05
SF3B5-201ENST00000367569 LRRC8AQ8IWT6 810 aa14.72□□□□□ -0.05
SF3B5-201ENST00000367569 RCOR2Q8IZ40 523 aa14.72□□□□□ -0.05
SF3B5-201ENST00000367569 TP53I13Q8NBR0 393 aaPredicted RBP14.72□□□□□ -0.05
SF3B5-201ENST00000367569 LPCAT1Q8NF37 534 aa14.72□□□□□ -0.05
SF3B5-201ENST00000367569 ARRDC2Q8TBH0 407 aa14.72□□□□□ -0.05
SF3B5-201ENST00000367569 RBM15Q96T37 977 aaKnown RBP eCLIP14.72□□□□□ -0.053e-8■□□□□ 10.5
SF3B5-201ENST00000367569 AMFRQ9UKV5 643 aa14.72□□□□□ -0.05
SF3B5-201ENST00000367569 PCDHA3Q9Y5H8 950 aa14.72□□□□□ -0.05
SF3B5-201ENST00000367569 FASNP49327 2511 aaKnown RBP14.72□□□□□ -0.05
SF3B5-201ENST00000367569 ENC1O14682 589 aa14.71□□□□□ -0.05
SF3B5-201ENST00000367569 FPGTO14772 594 aa14.71□□□□□ -0.05
SF3B5-201ENST00000367569 DDX3YO15523 660 aaKnown RBP14.71□□□□□ -0.05
SF3B5-201ENST00000367569 ARHGAP6O43182 974 aa14.71□□□□□ -0.05
SF3B5-201ENST00000367569 HTRA2O43464 458 aaPredicted RBP14.71□□□□□ -0.05
SF3B5-201ENST00000367569 MMP2P08253 660 aa14.71□□□□□ -0.05
SF3B5-201ENST00000367569 PYGMP11217 842 aa14.71□□□□□ -0.05
SF3B5-201ENST00000367569 ZFXP17010 805 aaPredicted RBP14.71□□□□□ -0.05
SF3B5-201ENST00000367569 GM2AP17900 193 aa14.71□□□□□ -0.05
SF3B5-201ENST00000367569 TGM2P21980 687 aa14.71□□□□□ -0.05
SF3B5-201ENST00000367569 EPHA8P29322 1005 aaPredicted RBP14.71□□□□□ -0.05
SF3B5-201ENST00000367569 NUDT1P36639 197 aa14.71□□□□□ -0.05
SF3B5-201ENST00000367569 PEX5P50542 639 aa14.71□□□□□ -0.05
SF3B5-201ENST00000367569 CLDN6P56747 220 aa14.71□□□□□ -0.05
SF3B5-201ENST00000367569 RWDD2BP57060 319 aa14.71□□□□□ -0.05
SF3B5-201ENST00000367569 CYP4F3Q08477 520 aa14.71□□□□□ -0.05
SF3B5-201ENST00000367569 PDE1CQ14123 709 aaPredicted RBP14.71□□□□□ -0.05
SF3B5-201ENST00000367569 ACOX1Q15067 660 aa14.71□□□□□ -0.05
SF3B5-201ENST00000367569 ARMC12Q5T9G4 340 aa14.71□□□□□ -0.05
SF3B5-201ENST00000367569 DPPA4Q7L190 304 aa14.71□□□□□ -0.05
SF3B5-201ENST00000367569 ABI3BPQ7Z7G0 1075 aa14.71□□□□□ -0.05
SF3B5-201ENST00000367569 VSIG1Q86XK7 387 aa14.71□□□□□ -0.05
SF3B5-201ENST00000367569 LRRC49Q8IUZ0 686 aa14.71□□□□□ -0.05
SF3B5-201ENST00000367569 PELI3Q8N2H9 469 aa14.71□□□□□ -0.05
SF3B5-201ENST00000367569 EID2Q8N6I1 236 aa14.71□□□□□ -0.05
SF3B5-201ENST00000367569 PLA2G15Q8NCC3 412 aa14.71□□□□□ -0.05
SF3B5-201ENST00000367569 P3H4Q92791 437 aa14.71□□□□□ -0.05
SF3B5-201ENST00000367569 CNDP2Q96KP4 475 aaKnown RBP14.71□□□□□ -0.05
SF3B5-201ENST00000367569 QKIQ96PU8 341 aaKnown RBP eCLIP14.71□□□□□ -0.05
SF3B5-201ENST00000367569 IL12RB2Q99665 862 aa14.71□□□□□ -0.05
SF3B5-201ENST00000367569 TDRD1Q9BXT4 1180 aaKnown RBP14.71□□□□□ -0.05
SF3B5-201ENST00000367569 UBP1Q9NZI7 540 aa14.71□□□□□ -0.05
SF3B5-201ENST00000367569 TPX2Q9ULW0 747 aaKnown RBP14.71□□□□□ -0.05
SF3B5-201ENST00000367569 IGSF10Q6WRI0 2623 aa14.7□□□□□ -0.06
SF3B5-201ENST00000367569 CCDC66A2RUB6 948 aa14.7□□□□□ -0.06
SF3B5-201ENST00000367569 GOLGA6CA6NDK9 693 aa14.7□□□□□ -0.06
SF3B5-201ENST00000367569 GOLGA6BA6NDN3 693 aa14.7□□□□□ -0.06
SF3B5-201ENST00000367569 FFAR2O15552 330 aa14.7□□□□□ -0.06
SF3B5-201ENST00000367569 LDOC1O95751 146 aaPredicted RBP14.7□□□□□ -0.06
SF3B5-201ENST00000367569 GOLGA6DP0CG33 693 aa14.7□□□□□ -0.06
SF3B5-201ENST00000367569 PTPN3P26045 913 aa14.7□□□□□ -0.06
SF3B5-201ENST00000367569 VIPR1P32241 457 aa14.7□□□□□ -0.06
SF3B5-201ENST00000367569 EPHB1P54762 984 aa14.7□□□□□ -0.06
SF3B5-201ENST00000367569 SKOR1P84550 965 aa14.7□□□□□ -0.06
SF3B5-201ENST00000367569 OTUD4Q01804 1114 aaKnown RBP14.7□□□□□ -0.06
SF3B5-201ENST00000367569 PPP2R5EQ16537 467 aa14.7□□□□□ -0.06
SF3B5-201ENST00000367569 WSCD2Q2TBF2 565 aa14.7□□□□□ -0.06
SF3B5-201ENST00000367569 COL28A1Q2UY09 1125 aa14.7□□□□□ -0.06
SF3B5-201ENST00000367569 KCTD16Q68DU8 428 aa14.7□□□□□ -0.06
SF3B5-201ENST00000367569 ALG1LQ6GMV1 187 aa14.7□□□□□ -0.06
SF3B5-201ENST00000367569 LIPIQ6XZB0 460 aa14.7□□□□□ -0.06
SF3B5-201ENST00000367569 RFLNAQ6ZTI6 216 aa14.7□□□□□ -0.06
SF3B5-201ENST00000367569 BBS12Q6ZW61 710 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms