RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 LINC00271P0C7V0 271 aa4.55□□□□□ -1.68
RNU4-28P-201ENST00000364739 GNAQP50148 359 aa4.55□□□□□ -1.68
RNU4-28P-201ENST00000364739 DLX5P56178 289 aa4.55□□□□□ -1.68
RNU4-28P-201ENST00000364739 ILF3Q12906 894 aaKnown RBP eCLIP4.55□□□□□ -1.68
RNU4-28P-201ENST00000364739 OASLQ15646 514 aaKnown RBP4.55□□□□□ -1.68
RNU4-28P-201ENST00000364739 HIST2H2ACQ16777 129 aaPredicted RBP4.55□□□□□ -1.68
RNU4-28P-201ENST00000364739 TCTN1Q2MV58 587 aa4.55□□□□□ -1.68
RNU4-28P-201ENST00000364739 SLC45A4Q5BKX6 768 aa4.55□□□□□ -1.68
RNU4-28P-201ENST00000364739 SLC36A4Q6YBV0 504 aa4.55□□□□□ -1.68
RNU4-28P-201ENST00000364739 RRM2BQ7LG56 351 aa4.55□□□□□ -1.68
RNU4-28P-201ENST00000364739 ESX1Q8N693 406 aa4.55□□□□□ -1.68
RNU4-28P-201ENST00000364739 SCCPDHQ8NBX0 429 aa4.55□□□□□ -1.68
RNU4-28P-201ENST00000364739 SPATA22Q8NHS9 363 aa4.55□□□□□ -1.68
RNU4-28P-201ENST00000364739 MORC4Q8TE76 937 aa4.55□□□□□ -1.68
RNU4-28P-201ENST00000364739 MMTAG2Q9BU76 263 aaKnown RBP4.55□□□□□ -1.68
RNU4-28P-201ENST00000364739 SLC25A18Q9H1K4 315 aa4.55□□□□□ -1.68
RNU4-28P-201ENST00000364739 PLEKHA4Q9H4M7 779 aa4.55□□□□□ -1.68
RNU4-28P-201ENST00000364739 SMARCAL1Q9NZC9 954 aa4.55□□□□□ -1.68
RNU4-28P-201ENST00000364739 FBXO9Q9UK97 447 aaPredicted RBP4.55□□□□□ -1.68
RNU4-28P-201ENST00000364739 TBX20Q9UMR3 447 aa4.55□□□□□ -1.68
RNU4-28P-201ENST00000364739 STON1Q9Y6Q2 735 aa4.55□□□□□ -1.68
RNU4-28P-201ENST00000364739 A0A0G2JPF8 293 aa4.54□□□□□ -1.68
RNU4-28P-201ENST00000364739 HNRNPCL3B7ZW38 293 aa4.54□□□□□ -1.68
RNU4-28P-201ENST00000364739 ZNF587BE7ETH6 402 aa4.54□□□□□ -1.68
RNU4-28P-201ENST00000364739 TSPAN4O14817 238 aa4.54□□□□□ -1.68
RNU4-28P-201ENST00000364739 SEC14L5O43304 696 aa4.54□□□□□ -1.68
RNU4-28P-201ENST00000364739 HNRNPCL1O60812 293 aaKnown RBP4.54□□□□□ -1.68
RNU4-28P-201ENST00000364739 HNRNPCL4P0DMR1 293 aa4.54□□□□□ -1.68
RNU4-28P-201ENST00000364739 GPTP24298 496 aa4.54□□□□□ -1.68
RNU4-28P-201ENST00000364739 ABCD3P28288 659 aa4.54□□□□□ -1.68
RNU4-28P-201ENST00000364739 CHATP28329 748 aa4.54□□□□□ -1.68
RNU4-28P-201ENST00000364739 PAFAH1B1P43034 410 aa4.54□□□□□ -1.68
RNU4-28P-201ENST00000364739 HYAL1Q12794 435 aa4.54□□□□□ -1.68
RNU4-28P-201ENST00000364739 ZBTB17Q13105 803 aa4.54□□□□□ -1.68
RNU4-28P-201ENST00000364739 COL28A1Q2UY09 1125 aa4.54□□□□□ -1.68
RNU4-28P-201ENST00000364739 WBP2NLQ6ICG8 309 aa4.54□□□□□ -1.68
RNU4-28P-201ENST00000364739 ZNF329Q86UD4 541 aa4.54□□□□□ -1.68
RNU4-28P-201ENST00000364739 SMAP1Q8IYB5 467 aaPredicted RBP4.54□□□□□ -1.68
RNU4-28P-201ENST00000364739 BEST2Q8NFU1 509 aa4.54□□□□□ -1.68
RNU4-28P-201ENST00000364739 HUS1BQ8NHY5 278 aa4.54□□□□□ -1.68
RNU4-28P-201ENST00000364739 NOC3LQ8WTT2 800 aaKnown RBP4.54□□□□□ -1.68
RNU4-28P-201ENST00000364739 ST8SIA4Q92187 359 aa4.54□□□□□ -1.68
RNU4-28P-201ENST00000364739 INPP4AQ96PE3 977 aaPredicted RBP4.54□□□□□ -1.68
RNU4-28P-201ENST00000364739 PSMD1Q99460 953 aa4.54□□□□□ -1.68
RNU4-28P-201ENST00000364739 VEZTQ9HBM0 779 aa4.54□□□□□ -1.68
RNU4-28P-201ENST00000364739 ARHGAP26Q9UNA1 814 aa4.54□□□□□ -1.68
RNU4-28P-201ENST00000364739 A4GNTQ9UNA3 340 aa4.54□□□□□ -1.68
RNU4-28P-201ENST00000364739 NAALADL1Q9UQQ1 740 aa4.54□□□□□ -1.68
RNU4-28P-201ENST00000364739 PCDHAC2Q9Y5I4 1007 aa4.54□□□□□ -1.68
RNU4-28P-201ENST00000364739 LRRFIP2Q9Y608 721 aaKnown RBP4.54□□□□□ -1.68
RNU4-28P-201ENST00000364739 PDS5AQ29RF7 1337 aaKnown RBP4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 TMEM202A6NGA9 273 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 XPNPEP2O43895 674 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 GAGE7O76087 117 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 IGKV3-20P01619 116 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 F7P08709 466 aaPredicted RBP4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 GAGE12FP0CL80 117 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 GAGE12GP0CL81 117 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 GAGE12IP0CL82 117 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 SRCP12931 536 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 ZNF132P52740 706 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 VAMP2P63027 116 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 SLC20A2Q08357 652 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 ARL16Q0P5N6 197 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 GAGE1Q13065 139 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 GAGE4Q13068 117 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 BAK1Q16611 211 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 ATP13A5Q4VNC0 1218 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 ZNF628Q5EBL2 1059 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 UNQ6126/PRO20091Q6UXV3 157 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 QSOX2Q6ZRP7 698 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 USP43Q70EL4 1123 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 ODF3L1Q8IXM7 274 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 ZNF34Q8IZ26 560 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 DSELQ8IZU8 1212 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 KLHL29Q96CT2 875 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 RRP36Q96EU6 259 aaKnown RBP4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 ZNF385AQ96PM9 386 aaKnown RBP4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 NODALQ96S42 347 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 EIF2AK1Q9BQI3 630 aaKnown RBP4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 PAIP1Q9H074 479 aaKnown RBP4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 USP44Q9H0E7 712 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 NDST4Q9H3R1 872 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 SDF2L1Q9HCN8 221 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 TCF7L2Q9NQB0 619 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 ZNF224Q9NZL3 707 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 C1RLQ9NZP8 487 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 SIX4Q9UIU6 781 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 CAMK2AQ9UQM7 478 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 CRYL1Q9Y2S2 319 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 CYP46A1Q9Y6A2 500 aa4.53□□□□□ -1.68
RNU4-28P-201ENST00000364739 IGHV4OR15-8A0A075B7B6 117 aa4.52□□□□□ -1.69
RNU4-28P-201ENST00000364739 IGLV2-11P01706 119 aa4.52□□□□□ -1.69
RNU4-28P-201ENST00000364739 POU5F1BQ06416 359 aa4.52□□□□□ -1.69
RNU4-28P-201ENST00000364739 TNFAIP1Q13829 316 aa4.52□□□□□ -1.69
RNU4-28P-201ENST00000364739 PRICKLE4Q2TBC4 344 aa4.52□□□□□ -1.69
RNU4-28P-201ENST00000364739 TMEM95Q3KNT9 176 aa4.52□□□□□ -1.69
RNU4-28P-201ENST00000364739 C9orf50Q5SZB4 431 aa4.52□□□□□ -1.69
RNU4-28P-201ENST00000364739 TUBA1AQ71U36 451 aa4.52□□□□□ -1.69
RNU4-28P-201ENST00000364739 TAOK1Q7L7X3 1001 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms