RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 CENPIQ92674 756 aaPredicted RBP9.22□□□□□ -0.93
CALD1-202ENST00000361901 UTP4Q969X6 686 aaKnown RBP9.22□□□□□ -0.93
CALD1-202ENST00000361901 TEKT5Q96M29 485 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 CADM1Q9BY67 442 aaKnown RBP9.22□□□□□ -0.93
CALD1-202ENST00000361901 OSER1Q9NX31 292 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 SQORQ9Y6N5 450 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 ARID2Q68CP9 1835 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 A0A096LPK6 155 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 PSMD3O43242 534 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 MAP4P27816 1152 aaKnown RBP9.22□□□□□ -0.93
CALD1-202ENST00000361901 CSHL1Q14406 222 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 DLG2Q15700 870 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 TRIM71Q2Q1W2 868 aaKnown RBP9.22□□□□□ -0.93
CALD1-202ENST00000361901 ANKDD1AQ495B1 522 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 PPM1LQ5SGD2 360 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 RARS2Q5T160 578 aaKnown RBP9.22□□□□□ -0.93
CALD1-202ENST00000361901 MFSD5Q6N075 450 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 GAB3Q8WWW8 586 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 HDAC11Q96DB2 347 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 VAT1Q99536 393 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 CIPCQ9C0C6 399 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 UBA2Q9UBT2 640 aaPredicted RBP9.22□□□□□ -0.93
CALD1-202ENST00000361901 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.22□□□□□ -0.93
CALD1-202ENST00000361901 A0A1W2PRU2 124 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 C1RP00736 705 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 CYP11A1P05108 521 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 TCEA1P23193 301 aaKnown RBP9.22□□□□□ -0.93
CALD1-202ENST00000361901 TRPC1P48995 793 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 CDK16Q00536 496 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 ANKRD20A4Q4UJ75 823 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 MS4A13Q5J8X5 152 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 PERM1Q5SV97 790 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 ESRP1Q6NXG1 681 aaKnown RBP9.22□□□□□ -0.93
CALD1-202ENST00000361901 CNKSR3Q6P9H4 555 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 RSPO2Q6UXX9 243 aaPredicted RBP9.22□□□□□ -0.93
CALD1-202ENST00000361901 CYP4V2Q6ZWL3 525 aaPredicted RBP9.22□□□□□ -0.93
CALD1-202ENST00000361901 RTL3Q8N8U3 475 aaKnown RBP9.22□□□□□ -0.93
CALD1-202ENST00000361901 SLC44A1Q8WWI5 657 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 LRRC39Q96DD0 335 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 ZFYVE19Q96K21 471 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 TXLNGYQ9BZA5 131 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 SMOC2Q9H3U7 446 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 PPCSQ9HAB8 311 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 C12orf4Q9NQ89 552 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 SCML2Q9UQR0 700 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 YIPF1Q9Y548 306 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 PCDHGC4Q9Y5F7 938 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 CPQQ9Y646 472 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 TEX264Q9Y6I9 313 aa9.22□□□□□ -0.93
CALD1-202ENST00000361901 C2orf71A6NGG8 1288 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 ZSCAN5BA6NJL1 495 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 E5RI56 91 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 PITPNM1O00562 1244 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 PER2O15055 1255 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 AP2A1O95782 977 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 HLA-DQB2P05538 268 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 HAPLN1P10915 354 aaPredicted RBP9.21□□□□□ -0.93
CALD1-202ENST00000361901 AIF1P55008 147 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 RIPOR1Q6ZS17 1223 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 DDX53Q86TM3 631 aaKnown RBP9.21□□□□□ -0.93
CALD1-202ENST00000361901 ING5Q8WYH8 240 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 BORCS5Q969J3 196 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 IGSF8Q969P0 613 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 APOPT1Q96IL0 206 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 MAELQ96JY0 434 aaKnown RBP9.21□□□□□ -0.93
CALD1-202ENST00000361901 TCF25Q9BQ70 676 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 OSBPL6Q9BZF3 934 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 POLR1EQ9GZS1 481 aaKnown RBP9.21□□□□□ -0.93
CALD1-202ENST00000361901 CRISPLD1Q9H336 500 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 TRIM39Q9HCM9 518 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 ZNF358Q9NW07 568 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 ARMCX1Q9P291 453 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 AFF4Q9UHB7 1163 aaKnown RBP9.21□□□□□ -0.93
CALD1-202ENST00000361901 ACTL7AQ9Y615 435 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 LOC285556D6RIA3 1793 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 A0A0D9SEW6 157 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 SH3PXD2BA1X283 911 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 CFAP99D6REC4 459 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 KPNA4O00629 521 aaPredicted RBP9.21□□□□□ -0.93
CALD1-202ENST00000361901 STX7O15400 261 aaKnown RBP9.21□□□□□ -0.93
CALD1-202ENST00000361901 NDUFS3O75489 264 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 MT-CO1P00395 513 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 TPSB2P20231 275 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 MZF1P28698 734 aaPredicted RBP9.21□□□□□ -0.93
CALD1-202ENST00000361901 ACADVLP49748 655 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 WDR4P57081 412 aaKnown RBP9.21□□□□□ -0.93
CALD1-202ENST00000361901 SEMA5AQ13591 1074 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 SLC12A1Q13621 1099 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 TPSAB1Q15661 275 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 ITIH5Q86UX2 942 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 DENND6AQ8IWF6 608 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 RPL10LQ96L21 214 aaKnown RBP9.21□□□□□ -0.93
CALD1-202ENST00000361901 C8orf48Q96LL4 319 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 ZNF778Q96MU6 729 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 OMDQ99983 421 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 IL22Q9GZX6 179 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.21□□□□□ -0.93
CALD1-202ENST00000361901 TLR6Q9Y2C9 796 aa9.21□□□□□ -0.93
CALD1-202ENST00000361901 F5P12259 2224 aa9.21□□□□□ -0.94
CALD1-202ENST00000361901 FUOMA2VDF0 154 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms