RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 SLC39A8Q9C0K1 460 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 PRMT5O14744 637 aaPredicted RBP18.61■□□□□ 0.57
CLIP2-202ENST00000361545 NDST3O95803 873 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 DRG2P55039 364 aaKnown RBP18.61■□□□□ 0.57
CLIP2-202ENST00000361545 MRPS35P82673 323 aaKnown RBP18.61■□□□□ 0.57
CLIP2-202ENST00000361545 ELP6Q0PNE2 266 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 MAPKAPK3Q16644 382 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 ZNF662Q6ZS27 426 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 FEM1CQ96JP0 617 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 PHACTR1Q9C0D0 580 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 RNF39Q9H2S5 420 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 CIDEBQ9UHD4 219 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 DDX3YO15523 660 aaKnown RBP18.61■□□□□ 0.57
CLIP2-202ENST00000361545 CAP1Q01518 475 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 DNAJB14Q8TBM8 379 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 FNIP1Q8TF40 1166 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 CLEC4CQ8WTT0 213 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 CKAP2Q8WWK9 683 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 AP2M1Q96CW1 435 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 SEMA6AQ9H2E6 1030 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 AFDNP55196 1824 aaKnown RBP18.61■□□□□ 0.57
CLIP2-202ENST00000361545 A0A1W2PRU2 124 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 NPEPPSL1A6NEC2 478 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 C9IYK1 514 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 PER2O15055 1255 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 SCAMP1O15126 338 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 GJA9P57773 515 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 GPM6BQ13491 265 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 NPY5RQ15761 445 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 ZCWPW2Q504Y3 356 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 OR6Y1Q8NGX8 325 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 ZFP28Q8NHY6 868 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 ACMSDQ8TDX5 336 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 TIFAQ96CG3 184 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 PAWRQ96IZ0 340 aaKnown RBP18.61■□□□□ 0.57
CLIP2-202ENST00000361545 HBS1LQ9Y450 684 aaKnown RBP18.61■□□□□ 0.57
CLIP2-202ENST00000361545 TCRBV7S2A1N4TA0A589 114 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 FAM20BO75063 409 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 DGKGP49619 791 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 GCNT7Q6ZNI0 430 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 BNIPLQ7Z465 357 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 DSELQ8IZU8 1212 aa18.61■□□□□ 0.57
CLIP2-202ENST00000361545 LINC00854A0A1B0GVQ3 168 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 MAGEA13PA6NCF6 341 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 CDKN2BP42772 138 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 PTPN9P43378 593 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 CYP4F2P78329 520 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 C10orf107Q8IVU9 208 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 ANKRD49Q8WVL7 239 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 PRCCQ92733 491 aaPredicted RBP18.6■□□□□ 0.57
CLIP2-202ENST00000361545 MRPL48Q96GC5 212 aaKnown RBP18.6■□□□□ 0.57
CLIP2-202ENST00000361545 TBC1D30Q9Y2I9 924 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 A0A1W2PPM1 405 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 OR2AG2A6NM03 316 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 PEX1O43933 1283 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 ASPAP45381 313 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 ATXN1P54253 815 aaKnown RBP18.6■□□□□ 0.57
CLIP2-202ENST00000361545 C1DQ13901 141 aaKnown RBP18.6■□□□□ 0.57
CLIP2-202ENST00000361545 BEND7Q8N7W2 519 aaPredicted RBP18.6■□□□□ 0.57
CLIP2-202ENST00000361545 NTPCRQ9BSD7 190 aaKnown RBP18.6■□□□□ 0.57
CLIP2-202ENST00000361545 MECRQ9BV79 373 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 PACSIN3Q9UKS6 424 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 CAB39Q9Y376 341 aaPredicted RBP18.6■□□□□ 0.57
CLIP2-202ENST00000361545 H3BM21 787 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 PAICSP22234 425 aaKnown RBP18.6■□□□□ 0.57
CLIP2-202ENST00000361545 MRPS15P82914 257 aaKnown RBP18.6■□□□□ 0.57
CLIP2-202ENST00000361545 BIKQ13323 160 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 SOWAHAQ2M3V2 549 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 GPAT3Q53EU6 434 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 LIPMQ5VYY2 423 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 TXNDC11Q6PKC3 985 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 KLHL23Q8NBE8 558 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 SLC45A1Q9Y2W3 748 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 RASGRP1O95267 797 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 L1CAMP32004 1257 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 FGD2Q7Z6J4 655 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 MINDY3Q9H8M7 445 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 ZNF232Q9UNY5 417 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 LYPLA1O75608 230 aaPredicted RBP18.6■□□□□ 0.57
CLIP2-202ENST00000361545 EPHA3P29320 983 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 MAT2AP31153 395 aaKnown RBP18.6■□□□□ 0.57
CLIP2-202ENST00000361545 SF1Q15637 639 aaKnown RBP18.6■□□□□ 0.57
CLIP2-202ENST00000361545 ZNF544Q6NX49 715 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 HERVK_113Q902F9 699 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 PSMG2Q969U7 264 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 EXO5Q9H790 373 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 ATP6V1HQ9UI12 483 aa18.6■□□□□ 0.57
CLIP2-202ENST00000361545 CHURC1-FNTBB4DL54 471 aa18.59■□□□□ 0.57
CLIP2-202ENST00000361545 TBX18O95935 607 aa18.59■□□□□ 0.57
CLIP2-202ENST00000361545 CCNCP24863 283 aa18.59■□□□□ 0.57
CLIP2-202ENST00000361545 SPAM1P38567 509 aa18.59■□□□□ 0.57
CLIP2-202ENST00000361545 DEFA1P59665 94 aa18.59■□□□□ 0.57
CLIP2-202ENST00000361545 DEFA3P59666 94 aa18.59■□□□□ 0.57
CLIP2-202ENST00000361545 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.59■□□□□ 0.57
CLIP2-202ENST00000361545 RNF44Q7L0R7 432 aa18.59■□□□□ 0.57
CLIP2-202ENST00000361545 C16orf62Q7Z3J2 963 aa18.59■□□□□ 0.57
CLIP2-202ENST00000361545 TBATAQ96M53 351 aa18.59■□□□□ 0.57
CLIP2-202ENST00000361545 RHOJQ9H4E5 214 aa18.59■□□□□ 0.57
CLIP2-202ENST00000361545 SLIT2O94813 1529 aa18.59■□□□□ 0.57
CLIP2-202ENST00000361545 SLC28A1O00337 649 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms