RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 TMEM26Q6ZUK4 368 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 TBC1D19Q8N5T2 526 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 RHOBTB2Q9BYZ6 727 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 SLC39A8Q9C0K1 460 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 HAPLN2Q9GZV7 340 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 NOL11Q9H8H0 719 aaKnown RBP16.38■□□□□ 0.21
SCAF1-201ENST00000360565 CYTH4Q9UIA0 394 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 ANXA5P08758 320 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 EPB42P16452 691 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 TYMPP19971 482 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 ACTR3P61158 418 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 ACSM2AQ08AH3 577 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 MTX3Q5HYI7 312 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 ACSM2BQ68CK6 577 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 ADAMTSL2Q86TH1 951 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 C11orf74Q86VG3 221 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 OR6K2Q8NGY2 324 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 C19orf60Q96EN9 201 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 ATP11BQ9Y2G3 1177 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 IDO1P14902 403 aa16.37■□□□□ 0.21
SCAF1-201ENST00000360565 SCNN1AP37088 669 aa16.37■□□□□ 0.21
SCAF1-201ENST00000360565 PWP1Q13610 501 aa16.37■□□□□ 0.21
SCAF1-201ENST00000360565 HNRNPDQ14103 355 aaKnown RBP16.37■□□□□ 0.21
SCAF1-201ENST00000360565 TRIM60Q495X7 471 aa16.37■□□□□ 0.21
SCAF1-201ENST00000360565 SLC44A4Q53GD3 710 aa16.37■□□□□ 0.21
SCAF1-201ENST00000360565 PLEKHA8Q96JA3 519 aa16.37■□□□□ 0.21
SCAF1-201ENST00000360565 SPATA16Q9BXB7 569 aa16.37■□□□□ 0.21
SCAF1-201ENST00000360565 DYRK1BQ9Y463 629 aa16.37■□□□□ 0.21
SCAF1-201ENST00000360565 ZBTB14O43829 449 aa16.37■□□□□ 0.21
SCAF1-201ENST00000360565 TBL1XO60907 577 aa16.37■□□□□ 0.21
SCAF1-201ENST00000360565 GPC1P35052 558 aa16.37■□□□□ 0.21
SCAF1-201ENST00000360565 NEK2P51955 445 aa16.37■□□□□ 0.21
SCAF1-201ENST00000360565 IRF8Q02556 426 aa16.37■□□□□ 0.21
SCAF1-201ENST00000360565 CPSF6Q16630 551 aaKnown RBP eCLIP16.37■□□□□ 0.21
SCAF1-201ENST00000360565 SLC5A9Q2M3M2 681 aa16.37■□□□□ 0.21
SCAF1-201ENST00000360565 GCNT7Q6ZNI0 430 aa16.37■□□□□ 0.21
SCAF1-201ENST00000360565 ADCY4Q8NFM4 1077 aa16.37■□□□□ 0.21
SCAF1-201ENST00000360565 SPPL2BQ8TCT7 592 aa16.37■□□□□ 0.21
SCAF1-201ENST00000360565 NTAN1Q96AB6 310 aa16.37■□□□□ 0.21
SCAF1-201ENST00000360565 TCF12Q99081 682 aa16.37■□□□□ 0.21
SCAF1-201ENST00000360565 DUSP11O75319 330 aaKnown RBP16.37■□□□□ 0.21
SCAF1-201ENST00000360565 ASGR1P07306 291 aa16.37■□□□□ 0.21
SCAF1-201ENST00000360565 PRKCHP24723 683 aa16.37■□□□□ 0.21
SCAF1-201ENST00000360565 ITGA7Q13683 1181 aa16.37■□□□□ 0.21
SCAF1-201ENST00000360565 SLC9B1Q4ZJI4 515 aa16.37■□□□□ 0.21
SCAF1-201ENST00000360565 TMEM132CQ8N3T6 1108 aa16.37■□□□□ 0.21
SCAF1-201ENST00000360565 CNTD1Q8N815 330 aa16.37■□□□□ 0.21
SCAF1-201ENST00000360565 UTP15Q8TED0 518 aaKnown RBP16.37■□□□□ 0.21
SCAF1-201ENST00000360565 WDR60Q8WVS4 1066 aa16.37■□□□□ 0.21
SCAF1-201ENST00000360565 NFKBIZQ9BYH8 718 aa16.37■□□□□ 0.21
SCAF1-201ENST00000360565 GNEQ9Y223 722 aaKnown RBP16.37■□□□□ 0.21
SCAF1-201ENST00000360565 OR6C75A6NL08 312 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 H3BMM5 538 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 KCNH1O95259 989 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 PIK3CGP48736 1102 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 TSTD2Q5T7W7 516 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 SPESP1Q6UW49 350 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 CTU1Q7Z7A3 348 aaKnown RBP16.36■□□□□ 0.21
SCAF1-201ENST00000360565 CAND1Q86VP6 1230 aaKnown RBP16.36■□□□□ 0.21
SCAF1-201ENST00000360565 CIR1Q86X95 450 aaPredicted RBP16.36■□□□□ 0.21
SCAF1-201ENST00000360565 UBR7Q8N806 425 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 RTL3Q8N8U3 475 aaKnown RBP16.36■□□□□ 0.21
SCAF1-201ENST00000360565 ACTRT2Q8TDY3 377 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 PSMG2Q969U7 264 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 TPD52L3Q96J77 140 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 OSBPL11Q9BXB4 747 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 STK39Q9UEW8 545 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 TEKT2Q9UIF3 430 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 UBR2Q8IWV8 1755 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 GLTPD2A6NH11 291 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 RPP40O75818 363 aaKnown RBP16.36■□□□□ 0.21
SCAF1-201ENST00000360565 NDST3O95803 873 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 AMHP03971 560 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 NTRK1P04629 796 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 SERPINB1P30740 379 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 CCL23P55773 120 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 BNIP2Q12982 314 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 SPRYD7Q5W111 196 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 FAM47BQ8NA70 645 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 HMCESQ96FZ2 354 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 DGCR6LQ9BY27 220 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 RIBC2Q9H4K1 309 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 YBEYP58557 167 aaPredicted RBP16.36■□□□□ 0.21
SCAF1-201ENST00000360565 CNSTQ6PJW8 725 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 TRMT11Q7Z4G4 463 aaKnown RBP16.36■□□□□ 0.21
SCAF1-201ENST00000360565 SYT12Q8IV01 421 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 TERB1Q8NA31 727 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 DNAJC1Q96KC8 554 aaKnown RBP16.36■□□□□ 0.21
SCAF1-201ENST00000360565 CNTN6Q9UQ52 1028 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 NRP1O14786 923 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 KLF11O14901 512 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 PKMP14618 531 aaKnown RBP16.36■□□□□ 0.21
SCAF1-201ENST00000360565 SPRED3Q2MJR0 410 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 VPS26BQ4G0F5 336 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 RGMBQ6NW40 437 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 SLC24A5Q71RS6 500 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 BBS7Q8IWZ6 715 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 OR7D4Q8NG98 312 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 UCMAQ8WVF2 138 aa16.36■□□□□ 0.21
SCAF1-201ENST00000360565 PPP3R2Q96LZ3 170 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms