RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 C1QTNF3-AMACRE9PGA6 284 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 PPM1BO75688 479 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 PRKD3O94806 890 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 JCHAINP01591 159 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 ORC1Q13415 861 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 CES3Q6UWW8 571 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 KCNK18Q7Z418 384 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 SLC34A3Q8N130 599 aa13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 FBXO6Q9NRD1 293 aaPredicted RBP13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 LEF1Q9UJU2 399 aaPredicted RBP13.25□□□□□ -0.29
SRGAP3-201ENST00000360413 MSH4O15457 936 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 UGT2B11O75310 529 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 SLC7A2P52569 658 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 TRPS1Q9UHF7 1281 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 ZNF510Q9Y2H8 683 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 TP73O15350 636 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 PSMA1P25786 263 aaKnown RBP13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 KLRC2P26717 231 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 RPL4P36578 427 aaKnown RBP13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 MCCD1P59942 119 aaPredicted RBP13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 EFEMP1Q12805 493 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 BAATQ14032 418 aaPredicted RBP13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 GALNT7Q86SF2 657 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 MIB1Q86YT6 1006 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 ZC3H7AQ8IWR0 971 aaKnown RBP13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 H0Y858 1186 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 XKRYO14609 159 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 MSCO60682 206 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 FOSL1P15407 271 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 TBX4P57082 545 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 C1QBPQ07021 282 aaKnown RBP13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 FNDC3BQ53EP0 1204 aaKnown RBP13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 ARMC12Q5T9G4 340 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 TMCO6Q96DC7 493 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 AP1S3Q96PC3 154 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 FADS3Q9Y5Q0 445 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 RGS10O43665 173 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 PSKH1P11801 424 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 RAB15P59190 212 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 AKAP1Q92667 903 aaKnown RBP eCLIP13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 BHMTQ93088 406 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 SEMA3GQ9NS98 782 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 PCDH10Q9P2E7 1040 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 HMGXB4Q9UGU5 601 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 GNEQ9Y223 722 aaKnown RBP13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 REXO2Q9Y3B8 237 aaKnown RBP13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 ACTL7BQ9Y614 415 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 BTN3A1O00481 513 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 SPTLC1O15269 473 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 GIMD1P0DJR0 217 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 XPNPEP3Q9NQH7 507 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 GPATCH2LQ9NWQ4 482 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 PCDHB5Q9Y5E4 795 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 PNPLA6Q8IY17 1366 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 SERPINA3P01011 423 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 MAPKAPK3Q16644 382 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 FAM117BQ6P1L5 589 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 TMPRSS11AQ6ZMR5 421 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 GALNT15Q8N3T1 639 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 DQX1Q8TE96 717 aaKnown RBP13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 EGFL7Q9UHF1 273 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 RPTORQ8N122 1335 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 ZNF608Q9ULD9 1512 aaPredicted RBP13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 ZNF609O15014 1411 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 MADCAM1Q13477 382 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 QSOX2Q6ZRP7 698 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 DNAAF5Q86Y56 855 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 BRSK2Q8IWQ3 736 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 TNKS2Q9H2K2 1166 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 MEMO1Q9Y316 297 aa13.24□□□□□ -0.29
SRGAP3-201ENST00000360413 OR2B6P58173 313 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 PFKFB4Q16877 469 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 ZDHHC20Q5W0Z9 365 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 C16orf86Q6ZW13 317 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 ETNPPLQ8TBG4 499 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 TLR10Q9BXR5 811 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 CHIAQ9BZP6 476 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 MSRAQ9UJ68 235 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 RARAP10276 462 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 HSD3B2P26439 372 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 TCF7P36402 384 aaPredicted RBP13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 ZNF234Q14588 700 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 GPR158Q5T848 1215 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 GRHL2Q6ISB3 625 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 RCN3Q96D15 328 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 ZNF512BQ96KM6 892 aaPredicted RBP13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 C12orf66Q96MD2 445 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 RABL2AQ9UBK7 228 aaPredicted RBP13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 TPH1P17752 444 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 AZGP1P25311 298 aaKnown RBP13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 TRIM64A6NGJ6 449 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 OR10H3O60404 316 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 CPNE3O75131 537 aaKnown RBP13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 ECT2LQ008S8 904 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 RTL4Q6ZR62 310 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 NKAPQ8N5F7 415 aaKnown RBP13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 STAG3L4Q8TBR4 150 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 PNMA5Q96PV4 448 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 MAGEE1Q9HCI5 957 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 BARX2Q9UMQ3 279 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms