RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 CDHR1Q96JP9 859 aa14.97□□□□□ -0.01
UBAP1-202ENST00000359544 LGMNQ99538 433 aa14.97□□□□□ -0.01
UBAP1-202ENST00000359544 MCMBPQ9BTE3 642 aa14.97□□□□□ -0.01
UBAP1-202ENST00000359544 MOV10Q9HCE1 1003 aaKnown RBP14.97□□□□□ -0.01
UBAP1-202ENST00000359544 INTS10Q9NVR2 710 aaKnown RBP14.97□□□□□ -0.01
UBAP1-202ENST00000359544 XPR1Q9UBH6 696 aa14.97□□□□□ -0.01
UBAP1-202ENST00000359544 TPST1O60507 370 aa14.96□□□□□ -0.01
UBAP1-202ENST00000359544 HSD17B1P14061 328 aa14.96□□□□□ -0.01
UBAP1-202ENST00000359544 HDCP19113 662 aa14.96□□□□□ -0.01
UBAP1-202ENST00000359544 GSTM2P28161 218 aa14.96□□□□□ -0.01
UBAP1-202ENST00000359544 GLUD2P49448 558 aa14.96□□□□□ -0.01
UBAP1-202ENST00000359544 ADARB1P78563 741 aaKnown RBP14.96□□□□□ -0.01
UBAP1-202ENST00000359544 SLC6A3Q01959 620 aa14.96□□□□□ -0.01
UBAP1-202ENST00000359544 USP10Q14694 798 aaKnown RBP14.96□□□□□ -0.01
UBAP1-202ENST00000359544 GRM3Q14832 879 aa14.96□□□□□ -0.01
UBAP1-202ENST00000359544 LDLRAP1Q5SW96 308 aa14.96□□□□□ -0.01
UBAP1-202ENST00000359544 MFSD14CQ5VZR4 134 aa14.96□□□□□ -0.01
UBAP1-202ENST00000359544 GTF2IRD2BQ6EKJ0 949 aa14.96□□□□□ -0.01
UBAP1-202ENST00000359544 NEK10Q6ZWH5 1172 aa14.96□□□□□ -0.01
UBAP1-202ENST00000359544 ARMCX6Q7L4S7 300 aa14.96□□□□□ -0.01
UBAP1-202ENST00000359544 GTF2IRD2Q86UP8 949 aa14.96□□□□□ -0.01
UBAP1-202ENST00000359544 ATP6V0D2Q8N8Y2 350 aa14.96□□□□□ -0.01
UBAP1-202ENST00000359544 OR52K1Q8NGK4 314 aa14.96□□□□□ -0.01
UBAP1-202ENST00000359544 USP33Q8TEY7 942 aa14.96□□□□□ -0.01
UBAP1-202ENST00000359544 KCTD4Q8WVF5 259 aa14.96□□□□□ -0.01
UBAP1-202ENST00000359544 P2RY11Q96G91 374 aa14.96□□□□□ -0.01
UBAP1-202ENST00000359544 VMP1Q96GC9 406 aa14.96□□□□□ -0.01
UBAP1-202ENST00000359544 TINF2Q9BSI4 451 aa14.96□□□□□ -0.01
UBAP1-202ENST00000359544 LHPPQ9H008 270 aa14.96□□□□□ -0.01
UBAP1-202ENST00000359544 EML4Q9HC35 981 aaKnown RBP14.96□□□□□ -0.01
UBAP1-202ENST00000359544 MRM3Q9HC36 420 aaKnown RBP14.96□□□□□ -0.01
UBAP1-202ENST00000359544 HMX1Q9NP08 348 aaPredicted RBP14.96□□□□□ -0.01
UBAP1-202ENST00000359544 ACTR3BQ9P1U1 418 aa14.96□□□□□ -0.01
UBAP1-202ENST00000359544 MAGEB16A2A368 324 aa14.96□□□□□ -0.02
UBAP1-202ENST00000359544 CCDC78A2IDD5 438 aa14.96□□□□□ -0.02
UBAP1-202ENST00000359544 MSI1O43347 362 aaKnown RBP14.96□□□□□ -0.02
UBAP1-202ENST00000359544 DEAF1O75398 565 aaPredicted RBP14.96□□□□□ -0.02
UBAP1-202ENST00000359544 SNAI1O95863 264 aaPredicted RBP14.96□□□□□ -0.02
UBAP1-202ENST00000359544 ALBP02768 609 aa14.96□□□□□ -0.02
UBAP1-202ENST00000359544 NR3C2P08235 984 aa14.96□□□□□ -0.02
UBAP1-202ENST00000359544 MYL3P08590 195 aa14.96□□□□□ -0.02
UBAP1-202ENST00000359544 PAX3P23760 479 aa14.96□□□□□ -0.02
UBAP1-202ENST00000359544 ARL4AP40617 200 aa14.96□□□□□ -0.02
UBAP1-202ENST00000359544 STX1BP61266 288 aa14.96□□□□□ -0.02
UBAP1-202ENST00000359544 RBM48Q5RL73 367 aaKnown RBP14.96□□□□□ -0.02
UBAP1-202ENST00000359544 IQSEC1Q6DN90 963 aa14.96□□□□□ -0.02
UBAP1-202ENST00000359544 LCLAT1Q6UWP7 414 aa14.96□□□□□ -0.02
UBAP1-202ENST00000359544 ADGRG5Q8IZF4 528 aa14.96□□□□□ -0.02
UBAP1-202ENST00000359544 MAGEE2Q8TD90 523 aaPredicted RBP14.96□□□□□ -0.02
UBAP1-202ENST00000359544 AFG1LQ8WV93 481 aa14.96□□□□□ -0.02
UBAP1-202ENST00000359544 ERLEC1Q96DZ1 483 aa14.96□□□□□ -0.02
UBAP1-202ENST00000359544 KCTD15Q96SI1 283 aaPredicted RBP14.96□□□□□ -0.02
UBAP1-202ENST00000359544 CSF3RQ99062 836 aa14.96□□□□□ -0.02
UBAP1-202ENST00000359544 IARS2Q9NSE4 1012 aaKnown RBP14.96□□□□□ -0.02
UBAP1-202ENST00000359544 ABCD2Q9UBJ2 740 aa14.96□□□□□ -0.02
UBAP1-202ENST00000359544 C16orf96A6NNT2 1141 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 SYNCRIPO60506 623 aaKnown RBP14.95□□□□□ -0.02
UBAP1-202ENST00000359544 KPNA2P52292 529 aaKnown RBP14.95□□□□□ -0.02
UBAP1-202ENST00000359544 DNAJB13P59910 316 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 SELENBP1Q13228 472 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 PRPSAP1Q14558 356 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 PLCL1Q15111 1095 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 MAPRE1Q15691 268 aaKnown RBP14.95□□□□□ -0.02
UBAP1-202ENST00000359544 SPATS1Q496A3 300 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 XAF1Q6GPH4 301 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 PLEKHG7Q6ZR37 379 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 ACVR1CQ8NER5 493 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.95□□□□□ -0.02
UBAP1-202ENST00000359544 MUC13Q9H3R2 512 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 RHOJQ9H4E5 214 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 SEPT10Q9P0V9 454 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 VPS51Q9UID3 782 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 TSPAN16Q9UKR8 245 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 KIAA1257Q9ULG3 409 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 SLC27A5Q9Y2P5 690 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 DOCK5Q9H7D0 1870 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 TTC24A2A3L6 582 aaPredicted RBP14.95□□□□□ -0.02
UBAP1-202ENST00000359544 MSCO60682 206 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 RFC2P35250 354 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 PTPN9P43378 593 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 PLA2G16P53816 162 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 TPTEP56180 551 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 SNX16P57768 344 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 SF3B4Q15427 424 aaKnown RBP eCLIP14.95□□□□□ -0.02
UBAP1-202ENST00000359544 PITRM1Q5JRX3 1037 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 CRTC3Q6UUV7 619 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 BTLAQ7Z6A9 289 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 DNAAF3Q8N9W5 541 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 ING2Q9H160 280 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 MRPL46Q9H2W6 279 aaKnown RBP14.95□□□□□ -0.02
UBAP1-202ENST00000359544 SIAEQ9HAT2 523 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 ZNF302Q9NR11 478 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 POU2F3Q9UKI9 436 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 ACOT9Q9Y305 439 aa14.95□□□□□ -0.02
UBAP1-202ENST00000359544 NME4O00746 187 aa14.94□□□□□ -0.02
UBAP1-202ENST00000359544 DNAJB5O75953 348 aa14.94□□□□□ -0.02
UBAP1-202ENST00000359544 IGHA2P01877 340 aa14.94□□□□□ -0.02
UBAP1-202ENST00000359544 NTRK1P04629 796 aa14.94□□□□□ -0.02
UBAP1-202ENST00000359544 F7P08709 466 aaPredicted RBP14.94□□□□□ -0.02
UBAP1-202ENST00000359544 SLC35E2BP0CK96 405 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms