RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 MAGEH1Q9H213 219 aa12.71□□□□□ -0.37
GGPS1-202ENST00000358966 TREX1Q9NSU2 369 aa12.71□□□□□ -0.37
GGPS1-202ENST00000358966 GPR39O43194 453 aa12.71□□□□□ -0.38
GGPS1-202ENST00000358966 HAUS5O94927 633 aa12.71□□□□□ -0.38
GGPS1-202ENST00000358966 GSRP00390 522 aa12.71□□□□□ -0.38
GGPS1-202ENST00000358966 CA3P07451 260 aa12.71□□□□□ -0.38
GGPS1-202ENST00000358966 CALB2P22676 271 aa12.71□□□□□ -0.38
GGPS1-202ENST00000358966 SLC18A1P54219 525 aa12.71□□□□□ -0.38
GGPS1-202ENST00000358966 LSAMPQ13449 338 aa12.71□□□□□ -0.38
GGPS1-202ENST00000358966 TEAD2Q15562 447 aa12.71□□□□□ -0.38
GGPS1-202ENST00000358966 CHI3L2Q15782 390 aa12.71□□□□□ -0.38
GGPS1-202ENST00000358966 CNSTQ6PJW8 725 aa12.71□□□□□ -0.38
GGPS1-202ENST00000358966 OR6P1Q8NGX9 317 aa12.71□□□□□ -0.38
GGPS1-202ENST00000358966 NAT14Q8WUY8 206 aa12.71□□□□□ -0.38
GGPS1-202ENST00000358966 NCSTNQ92542 709 aa12.71□□□□□ -0.38
GGPS1-202ENST00000358966 FAM192AQ9GZU8 254 aa12.71□□□□□ -0.38
GGPS1-202ENST00000358966 MARCH4Q9P2E8 410 aaPredicted RBP12.71□□□□□ -0.38
GGPS1-202ENST00000358966 TRIM33Q9UPN9 1127 aa12.71□□□□□ -0.38
GGPS1-202ENST00000358966 A0A0J9YVX5 310 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 GOLGA8CPA6NN73 597 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 SMAD6O43541 496 aaKnown RBP12.7□□□□□ -0.38
GGPS1-202ENST00000358966 BNIP3LO60238 219 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 LYPLA1O75608 230 aaPredicted RBP12.7□□□□□ -0.38
GGPS1-202ENST00000358966 OLFM2O95897 454 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 CLCN4P51793 760 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 GSTM4Q03013 218 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 CYTH1Q15438 398 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 CLPPQ16740 277 aaPredicted RBP12.7□□□□□ -0.38
GGPS1-202ENST00000358966 RBM20Q5T481 1227 aaKnown RBP12.7□□□□□ -0.38
GGPS1-202ENST00000358966 Q6ZNB5 142 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 ZC3HC1Q86WB0 502 aaKnown RBP12.7□□□□□ -0.38
GGPS1-202ENST00000358966 CEP97Q8IW35 865 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 CMTM8Q8IZV2 173 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 HDAC10Q969S8 669 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 MTBPQ96DY7 904 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 DNAJC1Q96KC8 554 aaKnown RBP12.7□□□□□ -0.38
GGPS1-202ENST00000358966 CEP295NLQ96MC4 621 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 RNPEPL1Q9HAU8 725 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 ASAH2Q9NR71 780 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 ARHGEF3Q9NR81 526 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 TRIM24O15164 1050 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 INSIG1O15503 277 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 KDELR3O43731 214 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 TRPC1P48995 793 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 SEMG2Q02383 582 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 CDK18Q07002 472 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 BST1Q10588 318 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 PPM1LQ5SGD2 360 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 FAM219BQ5XKK7 198 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 THOC7Q6I9Y2 204 aaKnown RBP12.7□□□□□ -0.38
GGPS1-202ENST00000358966 RAPH1Q70E73 1250 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 TDRD5Q8NAT2 981 aaKnown RBP12.7□□□□□ -0.38
GGPS1-202ENST00000358966 SHKBP1Q8TBC3 707 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 TBATAQ96M53 351 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 FEM1AQ9BSK4 669 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 CENPOQ9BU64 300 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 SPATA16Q9BXB7 569 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 DNMT3BQ9UBC3 853 aaKnown RBP12.7□□□□□ -0.38
GGPS1-202ENST00000358966 VPS51Q9UID3 782 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 TBC1D30Q9Y2I9 924 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 ANKRD12Q6UB98 2062 aa12.7□□□□□ -0.38
GGPS1-202ENST00000358966 A0A096LPK6 155 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 ILVBLA1L0T0 632 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 HTR3EA5X5Y0 456 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 LEFTY2O00292 366 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 LDB2O43679 373 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 PRAMEF12O95522 483 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 CD70P32970 193 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 CRHR1P34998 444 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 GPR158Q5T848 1215 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 GRTP1Q5TC63 336 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 PDPK2PQ6A1A2 396 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 FITM2Q8N6M3 262 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 C12orf76Q8N812 135 aaPredicted RBP12.69□□□□□ -0.38
GGPS1-202ENST00000358966 RMDN1Q96DB5 314 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 ZSWIM3Q96MP5 696 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 MGME1Q9BQP7 344 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 TSSK1BQ9BXA7 367 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 CROTQ9UKG9 612 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 A0A0G2JND7 137 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 MAGEB16A2A368 324 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 TK2O00142 265 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 PSMD3O43242 534 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 C2P06681 752 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 SERPINF2P08697 491 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 SPRP35270 261 aaPredicted RBP12.69□□□□□ -0.38
GGPS1-202ENST00000358966 PBX2P40425 430 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 CTSOP43234 321 aaPredicted RBP12.69□□□□□ -0.38
GGPS1-202ENST00000358966 STK19P49842 368 aaPredicted RBP12.69□□□□□ -0.38
GGPS1-202ENST00000358966 MUM1Q2TAK8 710 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 ZNF362Q5T0B9 420 aaPredicted RBP12.69□□□□□ -0.38
GGPS1-202ENST00000358966 SCUBE1Q8IWY4 988 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 LPCAT1Q8NF37 534 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 TADA1Q96BN2 335 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 PSKH2Q96QS6 385 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 MCMBPQ9BTE3 642 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 ACE2Q9BYF1 805 aaPredicted RBP12.69□□□□□ -0.38
GGPS1-202ENST00000358966 VPS45Q9NRW7 570 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 TMED5Q9Y3A6 229 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 GBF1Q92538 1859 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms