RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 SHOX2O60902 331 aaPredicted RBP17.1■□□□□ 0.33
TPM1-205ENST00000357980 ALDOAP04075 364 aaKnown RBP17.1■□□□□ 0.33
TPM1-205ENST00000357980 ALPIP09923 528 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 CHN1P15882 459 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 CTPS1P17812 591 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 LPOP22079 712 aaPredicted RBP17.1■□□□□ 0.33
TPM1-205ENST00000357980 SLC18A1P54219 525 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 PRAMEP78395 509 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 GUCY1A3Q02108 690 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 KIAA0408Q6ZU52 694 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 ZC3HC1Q86WB0 502 aaKnown RBP17.1■□□□□ 0.33
TPM1-205ENST00000357980 BANPQ8N9N5 519 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 OR4K2Q8NGD2 314 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 CALML6Q8TD86 181 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 ALKBH8Q96BT7 664 aaKnown RBP17.1■□□□□ 0.33
TPM1-205ENST00000357980 KLF6Q99612 283 aaPredicted RBP17.1■□□□□ 0.33
TPM1-205ENST00000357980 HEPHQ9BQS7 1158 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 CAPS2Q9BXY5 557 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 MTG2Q9H4K7 406 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 SUDS3Q9H7L9 328 aaPredicted RBP17.1■□□□□ 0.33
TPM1-205ENST00000357980 POLR3BQ9NW08 1133 aaPredicted RBP17.1■□□□□ 0.33
TPM1-205ENST00000357980 SMG5Q9UPR3 1016 aaKnown RBP17.1■□□□□ 0.33
TPM1-205ENST00000357980 PPIL1Q9Y3C6 166 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 A0A0U1RQS6 177 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 CCDC162PA2VCL2 907 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 CAPN8A6NHC0 703 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 FAM47DPA6NHR8 397 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 GOLGA8RI6L899 631 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 SPAG7O75391 227 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 AHSGP02765 367 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 UGT2B4P06133 528 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 PYGBP11216 843 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 SPRP35270 261 aaPredicted RBP17.1■□□□□ 0.33
TPM1-205ENST00000357980 CCNFP41002 786 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 ST8SIA6P61647 398 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 TMPRSS15P98073 1019 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 MPP1Q00013 466 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 PDE1BQ01064 536 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 CTBP1Q13363 440 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 CDKN3Q16667 212 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 FSTL4Q6MZW2 842 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 CILP2Q8IUL8 1156 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 OR6P1Q8NGX9 317 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 GRIN3AQ8TCU5 1115 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 ISL2Q96A47 359 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 EID2BQ96D98 161 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 CDKN2AIPNLQ96HQ2 116 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 LYSMD1Q96S90 227 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 RHOJQ9H4E5 214 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 BRD9Q9H8M2 597 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 KCNK9Q9NPC2 374 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 FBXO5Q9UKT4 447 aa17.1■□□□□ 0.33
TPM1-205ENST00000357980 OR51F1A6NGY5 319 aa17.09■□□□□ 0.33
TPM1-205ENST00000357980 KAT7O95251 611 aa17.09■□□□□ 0.33
TPM1-205ENST00000357980 CTSLP07711 333 aa17.09■□□□□ 0.33
TPM1-205ENST00000357980 KCNA5P22460 613 aa17.09■□□□□ 0.33
TPM1-205ENST00000357980 HMGCLP35914 325 aa17.09■□□□□ 0.33
TPM1-205ENST00000357980 SMAD4Q13485 552 aaKnown RBP17.09■□□□□ 0.33
TPM1-205ENST00000357980 UGP2Q16851 508 aa17.09■□□□□ 0.33
TPM1-205ENST00000357980 GDPD4Q6W3E5 623 aa17.09■□□□□ 0.33
TPM1-205ENST00000357980 LYSMD3Q7Z3D4 306 aa17.09■□□□□ 0.33
TPM1-205ENST00000357980 PTAR1Q7Z6K3 402 aaPredicted RBP17.09■□□□□ 0.33
TPM1-205ENST00000357980 GALNT7Q86SF2 657 aa17.09■□□□□ 0.33
TPM1-205ENST00000357980 ZNF366Q8N895 744 aa17.09■□□□□ 0.33
TPM1-205ENST00000357980 ATXN2LQ8WWM7 1075 aaKnown RBP17.09■□□□□ 0.33
TPM1-205ENST00000357980 VPS39Q96JC1 886 aa17.09■□□□□ 0.33
TPM1-205ENST00000357980 MCCC1Q96RQ3 725 aaPredicted RBP17.09■□□□□ 0.33
TPM1-205ENST00000357980 TMEM245Q9H330 911 aa17.09■□□□□ 0.33
TPM1-205ENST00000357980 UBE2ZQ9H832 354 aaPredicted RBP17.09■□□□□ 0.33
TPM1-205ENST00000357980 MARCH4Q9P2E8 410 aaPredicted RBP17.09■□□□□ 0.33
TPM1-205ENST00000357980 HCN2Q9UL51 889 aa17.09■□□□□ 0.33
TPM1-205ENST00000357980 PHTF1Q9UMS5 762 aa17.09■□□□□ 0.33
TPM1-205ENST00000357980 TBC1D3BA6NDS4 549 aa17.08■□□□□ 0.33
TPM1-205ENST00000357980 C2CD4DB7Z1M9 353 aa17.08■□□□□ 0.33
TPM1-205ENST00000357980 LEFTY1O75610 366 aa17.08■□□□□ 0.33
TPM1-205ENST00000357980 GOT2P00505 430 aaKnown RBP17.08■□□□□ 0.33
TPM1-205ENST00000357980 SLC4A1P02730 911 aa17.08■□□□□ 0.33
TPM1-205ENST00000357980 HNF1BP35680 557 aa17.08■□□□□ 0.33
TPM1-205ENST00000357980 GRIA2P42262 883 aa17.08■□□□□ 0.33
TPM1-205ENST00000357980 MAGEA12P43365 314 aa17.08■□□□□ 0.33
TPM1-205ENST00000357980 ABCG1P45844 678 aa17.08■□□□□ 0.33
TPM1-205ENST00000357980 ZNF234Q14588 700 aa17.08■□□□□ 0.33
TPM1-205ENST00000357980 HNRNPA1L2Q32P51 320 aaKnown RBP17.08■□□□□ 0.33
TPM1-205ENST00000357980 FNDC3BQ53EP0 1204 aaKnown RBP17.08■□□□□ 0.33
TPM1-205ENST00000357980 TTC19Q6DKK2 380 aaPredicted RBP17.08■□□□□ 0.33
TPM1-205ENST00000357980 LMNTD2Q8IXW0 634 aa17.08■□□□□ 0.33
TPM1-205ENST00000357980 DCLK2Q8N568 766 aa17.08■□□□□ 0.33
TPM1-205ENST00000357980 GPR150Q8NGU9 434 aa17.08■□□□□ 0.33
TPM1-205ENST00000357980 DENND1AQ8TEH3 1009 aa17.08■□□□□ 0.33
TPM1-205ENST00000357980 CENPTQ96BT3 561 aa17.08■□□□□ 0.33
TPM1-205ENST00000357980 ATXN7L3BQ96GX2 97 aa17.08■□□□□ 0.33
TPM1-205ENST00000357980 SGSM3Q96HU1 749 aa17.08■□□□□ 0.33
TPM1-205ENST00000357980 APOPT1Q96IL0 206 aa17.08■□□□□ 0.33
TPM1-205ENST00000357980 SRPK1Q96SB4 655 aaKnown RBP17.08■□□□□ 0.33
TPM1-205ENST00000357980 GPR22Q99680 433 aa17.08■□□□□ 0.33
TPM1-205ENST00000357980 C19orf43Q9BQ61 176 aa17.08■□□□□ 0.33
TPM1-205ENST00000357980 MKS1Q9NXB0 559 aa17.08■□□□□ 0.33
TPM1-205ENST00000357980 PSD3Q9NYI0 1048 aa17.08■□□□□ 0.33
TPM1-205ENST00000357980 IL17CQ9P0M4 197 aa17.08■□□□□ 0.33
TPM1-205ENST00000357980 A0A1W2PQ67 120 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms