RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 HHATQ5VTY9 493 aa9.22□□□□□ -0.93
UPF2-202ENST00000357604 HIST2H2AA3Q6FI13 130 aa9.22□□□□□ -0.93
UPF2-202ENST00000357604 SPRED2Q7Z698 418 aa9.22□□□□□ -0.93
UPF2-202ENST00000357604 MPP5Q8N3R9 675 aa9.22□□□□□ -0.93
UPF2-202ENST00000357604 ARFGAP2Q8N6H7 521 aa9.22□□□□□ -0.93
UPF2-202ENST00000357604 SETD7Q8WTS6 366 aaKnown RBP9.22□□□□□ -0.93
UPF2-202ENST00000357604 GAB3Q8WWW8 586 aa9.22□□□□□ -0.93
UPF2-202ENST00000357604 SMC6Q96SB8 1091 aa9.22□□□□□ -0.93
UPF2-202ENST00000357604 ERP44Q9BS26 406 aa9.22□□□□□ -0.93
UPF2-202ENST00000357604 RMI1Q9H9A7 625 aa9.22□□□□□ -0.93
UPF2-202ENST00000357604 KCNK9Q9NPC2 374 aa9.22□□□□□ -0.93
UPF2-202ENST00000357604 DTLQ9NZJ0 730 aa9.22□□□□□ -0.93
UPF2-202ENST00000357604 CHKBQ9Y259 395 aa9.22□□□□□ -0.93
UPF2-202ENST00000357604 SMIM23A6NLE4 172 aa9.22□□□□□ -0.93
UPF2-202ENST00000357604 SLC31A1O15431 190 aa9.22□□□□□ -0.93
UPF2-202ENST00000357604 AP2A1O95782 977 aa9.22□□□□□ -0.93
UPF2-202ENST00000357604 PPARDQ03181 441 aa9.22□□□□□ -0.93
UPF2-202ENST00000357604 FSTL4Q6MZW2 842 aa9.22□□□□□ -0.93
UPF2-202ENST00000357604 LRRC8BQ6P9F7 803 aa9.22□□□□□ -0.93
UPF2-202ENST00000357604 DPPA4Q7L190 304 aa9.22□□□□□ -0.93
UPF2-202ENST00000357604 ATG4AQ8WYN0 398 aa9.22□□□□□ -0.93
UPF2-202ENST00000357604 HIC2Q96JB3 615 aa9.22□□□□□ -0.93
UPF2-202ENST00000357604 WDR92Q96MX6 357 aa9.22□□□□□ -0.93
UPF2-202ENST00000357604 PSKH2Q96QS6 385 aa9.22□□□□□ -0.93
UPF2-202ENST00000357604 PRSS16Q9NQE7 514 aa9.22□□□□□ -0.93
UPF2-202ENST00000357604 DNAJC28Q9NX36 388 aa9.22□□□□□ -0.93
UPF2-202ENST00000357604 TLDC2A0PJX2 215 aa9.21□□□□□ -0.93
UPF2-202ENST00000357604 IL1R2P27930 398 aa9.21□□□□□ -0.93
UPF2-202ENST00000357604 GRK3P35626 688 aa9.21□□□□□ -0.93
UPF2-202ENST00000357604 NUMBP49757 651 aa9.21□□□□□ -0.93
UPF2-202ENST00000357604 SKP1P63208 163 aa9.21□□□□□ -0.93
UPF2-202ENST00000357604 SATB1Q01826 763 aa9.21□□□□□ -0.93
UPF2-202ENST00000357604 GPR33Q49SQ1 333 aa9.21□□□□□ -0.93
UPF2-202ENST00000357604 DCAF12L1Q5VU92 463 aa9.21□□□□□ -0.93
UPF2-202ENST00000357604 RASGEF1CQ8N431 466 aa9.21□□□□□ -0.93
UPF2-202ENST00000357604 PDCD7Q8N8D1 485 aaKnown RBP9.21□□□□□ -0.93
UPF2-202ENST00000357604 LRRC57Q8N9N7 239 aa9.21□□□□□ -0.93
UPF2-202ENST00000357604 OR6C4Q8NGE1 309 aa9.21□□□□□ -0.93
UPF2-202ENST00000357604 ZNF398Q8TD17 642 aa9.21□□□□□ -0.93
UPF2-202ENST00000357604 PIWIL1Q96J94 861 aaKnown RBP9.21□□□□□ -0.93
UPF2-202ENST00000357604 LOXL4Q96JB6 756 aa9.21□□□□□ -0.93
UPF2-202ENST00000357604 RAB11FIP5Q9BXF6 653 aa9.21□□□□□ -0.93
UPF2-202ENST00000357604 FTSJ1Q9UET6 329 aa9.21□□□□□ -0.93
UPF2-202ENST00000357604 DYRK1BQ9Y463 629 aa9.21□□□□□ -0.93
UPF2-202ENST00000357604 CCDC78A2IDD5 438 aa9.21□□□□□ -0.93
UPF2-202ENST00000357604 RGS16O15492 202 aaPredicted RBP9.21□□□□□ -0.93
UPF2-202ENST00000357604 CHEK2O96017 543 aa9.21□□□□□ -0.93
UPF2-202ENST00000357604 IGLV3-25P01717 112 aa9.21□□□□□ -0.93
UPF2-202ENST00000357604 CD72P21854 359 aa9.21□□□□□ -0.93
UPF2-202ENST00000357604 TARSP26639 723 aaKnown RBP9.21□□□□□ -0.93
UPF2-202ENST00000357604 MAT2AP31153 395 aaKnown RBP9.21□□□□□ -0.93
UPF2-202ENST00000357604 CARSP49589 748 aaKnown RBP9.21□□□□□ -0.93
UPF2-202ENST00000357604 VASPP50552 380 aaPredicted RBP9.21□□□□□ -0.93
UPF2-202ENST00000357604 PMS2P54278 862 aa9.21□□□□□ -0.93
UPF2-202ENST00000357604 HNRNPKP61978 463 aaKnown RBP eCLIP9.21□□□□□ -0.93
UPF2-202ENST00000357604 DHX9Q08211 1270 aaKnown RBP9.21□□□□□ -0.93
UPF2-202ENST00000357604 POU6F1Q14863 301 aa9.21□□□□□ -0.93
UPF2-202ENST00000357604 UAP1L1Q3KQV9 507 aa9.21□□□□□ -0.93
UPF2-202ENST00000357604 SLC22A12Q96S37 553 aa9.21□□□□□ -0.93
UPF2-202ENST00000357604 COPS8Q99627 209 aa9.21□□□□□ -0.93
UPF2-202ENST00000357604 CEP41Q9BYV8 373 aa9.21□□□□□ -0.93
UPF2-202ENST00000357604 TRIM7Q9C029 511 aa9.21□□□□□ -0.93
UPF2-202ENST00000357604 CALCOCO1Q9P1Z2 691 aa9.21□□□□□ -0.93
UPF2-202ENST00000357604 POC1B-GALNT4F8VUJ3 575 aa9.21□□□□□ -0.94
UPF2-202ENST00000357604 HLA-DQB2P05538 268 aa9.21□□□□□ -0.94
UPF2-202ENST00000357604 ERVK-10P10266 1014 aa9.21□□□□□ -0.94
UPF2-202ENST00000357604 AVPR2P30518 371 aa9.21□□□□□ -0.94
UPF2-202ENST00000357604 OPRD1P41143 372 aa9.21□□□□□ -0.94
UPF2-202ENST00000357604 IL12RB1P42701 662 aa9.21□□□□□ -0.94
UPF2-202ENST00000357604 FNTBP49356 437 aa9.21□□□□□ -0.94
UPF2-202ENST00000357604 TGM3Q08188 693 aa9.21□□□□□ -0.94
UPF2-202ENST00000357604 ADCY2Q08462 1091 aa9.21□□□□□ -0.94
UPF2-202ENST00000357604 FAM217AQ8IXS0 508 aa9.21□□□□□ -0.94
UPF2-202ENST00000357604 C17orf53Q8N3J3 647 aaPredicted RBP9.21□□□□□ -0.94
UPF2-202ENST00000357604 FAM122AQ96E09 287 aa9.21□□□□□ -0.94
UPF2-202ENST00000357604 PEBP4Q96S96 227 aa9.21□□□□□ -0.94
UPF2-202ENST00000357604 SELENOSQ9BQE4 189 aa9.21□□□□□ -0.94
UPF2-202ENST00000357604 FOXQ1Q9C009 403 aa9.21□□□□□ -0.94
UPF2-202ENST00000357604 LATS2Q9NRM7 1088 aa9.21□□□□□ -0.94
UPF2-202ENST00000357604 TFR2Q9UP52 801 aa9.21□□□□□ -0.94
UPF2-202ENST00000357604 HS3ST3A1Q9Y663 406 aa9.21□□□□□ -0.94
UPF2-202ENST00000357604 RPS6KL1Q9Y6S9 549 aa9.21□□□□□ -0.94
UPF2-202ENST00000357604 UQCRHLA0A096LP55 91 aa9.21□□□□□ -0.94
UPF2-202ENST00000357604 J3KR12 359 aa9.21□□□□□ -0.94
UPF2-202ENST00000357604 BCAT2O15382 392 aaPredicted RBP9.21□□□□□ -0.94
UPF2-202ENST00000357604 GALR2O43603 387 aaPredicted RBP9.21□□□□□ -0.94
UPF2-202ENST00000357604 EPOP01588 193 aa9.21□□□□□ -0.94
UPF2-202ENST00000357604 IGFBP6P24592 240 aaPredicted RBP9.21□□□□□ -0.94
UPF2-202ENST00000357604 STK19P49842 368 aaPredicted RBP9.21□□□□□ -0.94
UPF2-202ENST00000357604 ANGPT1Q15389 498 aa9.21□□□□□ -0.94
UPF2-202ENST00000357604 SPDYCQ5MJ68 293 aa9.21□□□□□ -0.94
UPF2-202ENST00000357604 GRTP1Q5TC63 336 aa9.21□□□□□ -0.94
UPF2-202ENST00000357604 ENPP7Q6UWV6 458 aa9.21□□□□□ -0.94
UPF2-202ENST00000357604 TRAM1L1Q8N609 369 aa9.21□□□□□ -0.94
UPF2-202ENST00000357604 MAGEB10Q96LZ2 347 aaPredicted RBP9.21□□□□□ -0.94
UPF2-202ENST00000357604 CCM2Q9BSQ5 444 aa9.21□□□□□ -0.94
UPF2-202ENST00000357604 PCYOX1Q9UHG3 505 aa9.21□□□□□ -0.94
UPF2-202ENST00000357604 A0A1W2PQU0 124 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 OR5K4A6NMS3 321 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 GOLGA8TH3BQL2 631 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms