RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 DUSP23Q9BVJ7 150 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 TRAIPQ9BWF2 469 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 MKRN2Q9H000 416 aaKnown RBP3.81□□□□□ -1.8
SMC1B-201ENST00000357450 KLHL25Q9H0H3 589 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 CCDC134Q9H6E4 229 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 NMUR1Q9HB89 426 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 ACSS2Q9NR19 701 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 RXFP3Q9NSD7 469 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.81□□□□□ -1.8
SMC1B-201ENST00000357450 OBP2AQ9NY56 170 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 SAMD15Q9P1V8 674 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 PRKAB1Q9Y478 270 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 CSPG4Q6UVK1 2322 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 C1orf232A0A0U1RR37 186 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 A8MUI8 341 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 PRAMEF26H0Y7S4 382 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 TNFSF14O43557 240 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 BUD23O43709 281 aaKnown RBP3.81□□□□□ -1.8
SMC1B-201ENST00000357450 KDM1AO60341 852 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 JCHAINP01591 159 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 MSH3P20585 1137 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 C5AR1P21730 350 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 HNRNPA2B1P22626 353 aaKnown RBP3.81□□□□□ -1.8
SMC1B-201ENST00000357450 GABRB3P28472 473 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 HOXC13P31276 330 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 OTX2P32243 289 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 CYLC1P35663 651 aaPredicted RBP3.81□□□□□ -1.8
SMC1B-201ENST00000357450 CCL11P51671 97 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 ZNF131P52739 623 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 CNTN1Q12860 1018 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 TAZQ16635 292 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 ZACNQ401N2 412 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 KIAA0895LQ68EN5 471 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 TMEM184AQ6ZMB5 413 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 ERN2Q76MJ5 926 aaKnown RBP3.81□□□□□ -1.8
SMC1B-201ENST00000357450 TAX1BP1Q86VP1 789 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 TMEM126BQ8IUX1 230 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 ZNF248Q8NDW4 579 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 GSTCDQ8NEC7 633 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 GABPB2Q8TAK5 448 aaPredicted RBP3.81□□□□□ -1.8
SMC1B-201ENST00000357450 HMCESQ96FZ2 354 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 DPYSL5Q9BPU6 564 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 IER2Q9BTL4 223 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 HEMGNQ9BXL5 484 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 SLC17A9Q9BYT1 436 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 CEP41Q9BYV8 373 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 SLC24A3Q9HC58 644 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 TM9SF3Q9HD45 589 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 RBM22Q9NW64 420 aaKnown RBP eCLIP3.81□□□□□ -1.8
SMC1B-201ENST00000357450 SLC39A1Q9NY26 324 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 APEX2Q9UBZ4 518 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 IL36AQ9UHA7 158 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 ADAMTS1Q9UHI8 967 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 KLK13Q9UKR3 277 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 SLC12A4Q9UP95 1085 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 ZNF148Q9UQR1 794 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 KCNK6Q9Y257 313 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 DSPP15924 2871 aaKnown RBP3.81□□□□□ -1.8
SMC1B-201ENST00000357450 ANO9A1A5B4 782 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 HMX2A2RU54 273 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 A6NNZ2 444 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 KCNU1A8MYU2 1149 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 LEFTY1O75610 366 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 CDK14O94921 469 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 TOP3BO95985 862 aaKnown RBP3.81□□□□□ -1.8
SMC1B-201ENST00000357450 H2AFZP0C0S5 128 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 HGFP14210 728 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 ITGB6P18564 788 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 ITGAXP20702 1163 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 ITGA3P26006 1051 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 ERCC5P28715 1186 aaPredicted RBP3.81□□□□□ -1.8
SMC1B-201ENST00000357450 RPS21P63220 83 aaKnown RBP3.81□□□□□ -1.8
SMC1B-201ENST00000357450 BOP1Q14137 746 aaKnown RBP3.81□□□□□ -1.8
SMC1B-201ENST00000357450 SLC9A5Q14940 896 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 NR0B2Q15466 257 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 NFIL3Q16649 462 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 FYB2Q5VWT5 728 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 H2AFVQ71UI9 128 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 CDC26Q8NHZ8 85 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 PRR7Q8TB68 274 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 FNIP1Q8TF40 1166 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 SHC3Q92529 594 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 LYSTQ99698 3801 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 NTPCRQ9BSD7 190 aaKnown RBP3.81□□□□□ -1.8
SMC1B-201ENST00000357450 GSDMCQ9BYG8 508 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 IL21RQ9HBE5 538 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 CASS4Q9NQ75 786 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 BZW2Q9Y6E2 419 aaKnown RBP3.81□□□□□ -1.8
SMC1B-201ENST00000357450 SCINQ9Y6U3 715 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 ASH1LQ9NR48 2969 aaKnown RBP3.8□□□□□ -1.8
SMC1B-201ENST00000357450 ROS1P08922 2347 aa3.8□□□□□ -1.8
SMC1B-201ENST00000357450 KRTAP9-6A0A140TA67 174 aa3.8□□□□□ -1.8
SMC1B-201ENST00000357450 TERTO14746 1132 aaKnown RBP3.8□□□□□ -1.8
SMC1B-201ENST00000357450 SLC26A4O43511 780 aa3.8□□□□□ -1.8
SMC1B-201ENST00000357450 LATO43561 262 aa3.8□□□□□ -1.8
SMC1B-201ENST00000357450 DFNA5O60443 496 aa3.8□□□□□ -1.8
SMC1B-201ENST00000357450 RPLP0P05388 317 aaKnown RBP3.8□□□□□ -1.8
SMC1B-201ENST00000357450 CYP2A7P20853 494 aa3.8□□□□□ -1.8
SMC1B-201ENST00000357450 MZF1P28698 734 aaPredicted RBP3.8□□□□□ -1.8
SMC1B-201ENST00000357450 GNA12Q03113 381 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms