RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 GEMIN4P57678 1058 aaKnown RBP4.04□□□□□ -1.76
LIG4-201ENST00000356922 AP1S1P61966 158 aa4.04□□□□□ -1.76
LIG4-201ENST00000356922 TMPRSS15P98073 1019 aa4.04□□□□□ -1.76
LIG4-201ENST00000356922 CNGA3Q16281 694 aa4.04□□□□□ -1.76
LIG4-201ENST00000356922 LPAL2Q16609 132 aa4.04□□□□□ -1.76
LIG4-201ENST00000356922 PREPLQ4J6C6 727 aaPredicted RBP4.04□□□□□ -1.76
LIG4-201ENST00000356922 ESRP1Q6NXG1 681 aaKnown RBP4.04□□□□□ -1.76
LIG4-201ENST00000356922 LIPIQ6XZB0 460 aa4.04□□□□□ -1.76
LIG4-201ENST00000356922 MAMSTRQ6ZN01 415 aa4.04□□□□□ -1.76
LIG4-201ENST00000356922 LDB1Q86U70 411 aaPredicted RBP4.04□□□□□ -1.76
LIG4-201ENST00000356922 ANKMY2Q8IV38 441 aa4.04□□□□□ -1.76
LIG4-201ENST00000356922 TTC30BQ8N4P2 665 aa4.04□□□□□ -1.76
LIG4-201ENST00000356922 CEP112Q8N8E3 955 aa4.04□□□□□ -1.76
LIG4-201ENST00000356922 GPR26Q8NDV2 337 aa4.04□□□□□ -1.76
LIG4-201ENST00000356922 TSTD1Q8NFU3 115 aa4.04□□□□□ -1.76
LIG4-201ENST00000356922 OR13J1Q8NGT2 312 aa4.04□□□□□ -1.76
LIG4-201ENST00000356922 BLOC1S5Q8TDH9 187 aa4.04□□□□□ -1.76
LIG4-201ENST00000356922 ZNF641Q96N77 438 aaPredicted RBP4.04□□□□□ -1.76
LIG4-201ENST00000356922 MCCC1Q96RQ3 725 aaPredicted RBP4.04□□□□□ -1.76
LIG4-201ENST00000356922 PHOX2BQ99453 314 aa4.04□□□□□ -1.76
LIG4-201ENST00000356922 KLF6Q99612 283 aaPredicted RBP4.04□□□□□ -1.76
LIG4-201ENST00000356922 TBL1YQ9BQ87 522 aa4.04□□□□□ -1.76
LIG4-201ENST00000356922 LGR4Q9BXB1 951 aa4.04□□□□□ -1.76
LIG4-201ENST00000356922 PARD6BQ9BYG5 372 aa4.04□□□□□ -1.76
LIG4-201ENST00000356922 PABPC3Q9H361 631 aaKnown RBP4.04□□□□□ -1.76
LIG4-201ENST00000356922 SYBUQ9NX95 663 aa4.04□□□□□ -1.76
LIG4-201ENST00000356922 WSB2Q9NYS7 404 aaPredicted RBP4.04□□□□□ -1.76
LIG4-201ENST00000356922 SPAG17Q6Q759 2223 aa4.04□□□□□ -1.76
LIG4-201ENST00000356922 KMT2EQ8IZD2 1858 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 TSPAN11A1L157 253 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 POM121BA6NF01 834 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 DLL1O00548 723 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 UGT1A9O60656 530 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 NDST3O95803 873 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 GAS8O95995 478 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 SOD1P00441 154 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 C1QAP02745 245 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 PRNPP04156 253 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 C1SP09871 688 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 UGT1A6P19224 532 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 UGT1A1P22309 533 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 UGT1A4P22310 534 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 SERPINA4P29622 427 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 UGT1A3P35503 534 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 UGT1A5P35504 534 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 MMP12P39900 470 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 CLDN2P57739 230 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 CKAP4Q07065 602 aaKnown RBP4.03□□□□□ -1.76
LIG4-201ENST00000356922 DHX9Q08211 1270 aaKnown RBP4.03□□□□□ -1.76
LIG4-201ENST00000356922 TCF15Q12870 199 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 MPP3Q13368 585 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 LRRC32Q14392 662 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 SEMA3AQ14563 771 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 STARD3Q14849 445 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 PRAMEF14Q5SWL7 426 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 ZNF648Q5T619 568 aaPredicted RBP4.03□□□□□ -1.76
LIG4-201ENST00000356922 ARMC12Q5T9G4 340 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 FBXL19Q6PCT2 694 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 TRMT10BQ6PF06 316 aaKnown RBP4.03□□□□□ -1.76
LIG4-201ENST00000356922 MAATS1Q7Z4T9 603 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 BBS5Q8N3I7 341 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 BIRC7Q96CA5 298 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 C9orf72Q96LT7 481 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 GPR174Q9BXC1 333 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 EPB41L4BQ9H329 900 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 UGT1A7Q9HAW7 530 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 UGT1A10Q9HAW8 530 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 UGT1A8Q9HAW9 530 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 FSCN3Q9NQT6 498 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 PRMT8Q9NR22 394 aaPredicted RBP4.03□□□□□ -1.76
LIG4-201ENST00000356922 BCCIPQ9P287 314 aaKnown RBP eCLIP4.03□□□□□ -1.76
LIG4-201ENST00000356922 R4GN57 208 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 MROH6A6NGR9 719 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 SLC31A1O15431 190 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 PLRG1O43660 514 aaKnown RBP4.03□□□□□ -1.76
LIG4-201ENST00000356922 STK10O94804 968 aaKnown RBP4.03□□□□□ -1.76
LIG4-201ENST00000356922 BPIP17213 487 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 C5AR1P21730 350 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 GPX6P59796 221 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 PEX6Q13608 980 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 TUBB2AQ13885 445 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 ANGPT1Q15389 498 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 ELF2Q15723 593 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 CCDC6Q16204 474 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 ZNF284Q2VY69 593 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 KHDC1Q4VXA5 237 aaKnown RBP4.03□□□□□ -1.76
LIG4-201ENST00000356922 ZNF789Q5FWF6 425 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 ZNF776Q68DI1 518 aaPredicted RBP4.03□□□□□ -1.76
LIG4-201ENST00000356922 CCDC70Q6NSX1 233 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 CAPN12Q6ZSI9 719 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 ARMCX6Q7L4S7 300 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 PPIL6Q8IXY8 311 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 PIANPQ8IYJ0 282 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 CCDC26Q8TAB7 109 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 NELL1Q92832 810 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 SNF8Q96H20 258 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 FEM1CQ96JP0 617 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 TBATAQ96M53 351 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 TUBGCP5Q96RT8 1024 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 OMDQ99983 421 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 201.7 ms