RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 INPP5AQ14642 412 aa15.78■□□□□ 0.12
RTN3-205ENST00000356000 ACAP2Q15057 778 aa15.78■□□□□ 0.12
RTN3-205ENST00000356000 PRR16Q569H4 304 aa15.78■□□□□ 0.12
RTN3-205ENST00000356000 GLRA4Q5JXX5 417 aa15.78■□□□□ 0.12
RTN3-205ENST00000356000 STRADAQ7RTN6 431 aa15.78■□□□□ 0.12
RTN3-205ENST00000356000 CCDC24Q8N4L8 307 aa15.78■□□□□ 0.12
RTN3-205ENST00000356000 ELMO3Q96BJ8 720 aa15.78■□□□□ 0.12
RTN3-205ENST00000356000 HPS4Q9NQG7 708 aa15.78■□□□□ 0.12
RTN3-205ENST00000356000 XPNPEP3Q9NQH7 507 aa15.78■□□□□ 0.12
RTN3-205ENST00000356000 HSPBP1Q9NZL4 362 aa15.78■□□□□ 0.12
RTN3-205ENST00000356000 A8MV72 311 aaPredicted RBP15.78■□□□□ 0.12
RTN3-205ENST00000356000 ZNF99A8MXY4 864 aaPredicted RBP15.78■□□□□ 0.12
RTN3-205ENST00000356000 WDR64B1ANS9 1081 aa15.78■□□□□ 0.12
RTN3-205ENST00000356000 APOA1P02647 267 aa15.78■□□□□ 0.12
RTN3-205ENST00000356000 CFHP08603 1231 aa15.78■□□□□ 0.12
RTN3-205ENST00000356000 CBLP22681 906 aa15.78■□□□□ 0.12
RTN3-205ENST00000356000 VBP1P61758 197 aa15.78■□□□□ 0.12
RTN3-205ENST00000356000 TAZQ16635 292 aa15.78■□□□□ 0.12
RTN3-205ENST00000356000 ASPRV1Q53RT3 343 aa15.78■□□□□ 0.12
RTN3-205ENST00000356000 ZNF484Q5JVG2 852 aa15.78■□□□□ 0.12
RTN3-205ENST00000356000 BIRC7Q96CA5 298 aa15.78■□□□□ 0.12
RTN3-205ENST00000356000 SERHL2Q9H4I8 314 aa15.78■□□□□ 0.12
RTN3-205ENST00000356000 TMEM8AQ9HCN3 771 aa15.78■□□□□ 0.12
RTN3-205ENST00000356000 POLMQ9NP87 494 aaPredicted RBP15.78■□□□□ 0.12
RTN3-205ENST00000356000 ITM2CQ9NQX7 267 aa15.78■□□□□ 0.12
RTN3-205ENST00000356000 IGSF5Q9NSI5 407 aa15.78■□□□□ 0.12
RTN3-205ENST00000356000 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.78■□□□□ 0.12
RTN3-205ENST00000356000 VAV3Q9UKW4 847 aa15.78■□□□□ 0.12
RTN3-205ENST00000356000 NAALAD2Q9Y3Q0 740 aa15.78■□□□□ 0.12
RTN3-205ENST00000356000 GRIP1Q9Y3R0 1128 aa15.78■□□□□ 0.12
RTN3-205ENST00000356000 AGAP5A6NIR3 686 aa15.77■□□□□ 0.12
RTN3-205ENST00000356000 TMEM88BA6NKF7 163 aa15.77■□□□□ 0.12
RTN3-205ENST00000356000 TPST1O60507 370 aa15.77■□□□□ 0.12
RTN3-205ENST00000356000 H2AFYO75367 372 aaKnown RBP15.77■□□□□ 0.12
RTN3-205ENST00000356000 TRAPPC2P0DI81 140 aa15.77■□□□□ 0.12
RTN3-205ENST00000356000 TRAPPC2BP0DI82 140 aa15.77■□□□□ 0.12
RTN3-205ENST00000356000 ALDH4A1P30038 563 aa15.77■□□□□ 0.12
RTN3-205ENST00000356000 ZNF76P36508 570 aa15.77■□□□□ 0.12
RTN3-205ENST00000356000 MLLT3P42568 568 aaPredicted RBP15.77■□□□□ 0.12
RTN3-205ENST00000356000 FPGSQ05932 587 aa15.77■□□□□ 0.12
RTN3-205ENST00000356000 PDK2Q15119 407 aa15.77■□□□□ 0.12
RTN3-205ENST00000356000 COLEC12Q5KU26 742 aa15.77■□□□□ 0.12
RTN3-205ENST00000356000 NXNL2Q5VZ03 156 aa15.77■□□□□ 0.12
RTN3-205ENST00000356000 REP15Q6BDI9 236 aa15.77■□□□□ 0.12
RTN3-205ENST00000356000 C8orf82Q6P1X6 216 aaPredicted RBP15.77■□□□□ 0.12
RTN3-205ENST00000356000 PNCKQ6P2M8 343 aa15.77■□□□□ 0.12
RTN3-205ENST00000356000 CYS1Q717R9 158 aa15.77■□□□□ 0.12
RTN3-205ENST00000356000 THAP5Q7Z6K1 395 aa15.77■□□□□ 0.12
RTN3-205ENST00000356000 KIAA1958Q8N8K9 716 aa15.77■□□□□ 0.12
RTN3-205ENST00000356000 FBXL13Q8NEE6 735 aa15.77■□□□□ 0.12
RTN3-205ENST00000356000 POMGNT1Q8WZA1 660 aa15.77■□□□□ 0.12
RTN3-205ENST00000356000 LENG9Q96B70 501 aa15.77■□□□□ 0.12
RTN3-205ENST00000356000 MYRFLQ96LU7 910 aa15.77■□□□□ 0.12
RTN3-205ENST00000356000 ZNF300Q96RE9 604 aaPredicted RBP15.77■□□□□ 0.12
RTN3-205ENST00000356000 CCSER2Q9H7U1 834 aa15.77■□□□□ 0.12
RTN3-205ENST00000356000 RAB6BQ9NRW1 208 aa15.77■□□□□ 0.12
RTN3-205ENST00000356000 ZNF639Q9UID6 485 aa15.77■□□□□ 0.12
RTN3-205ENST00000356000 PCDHA11Q9Y5I1 949 aa15.77■□□□□ 0.12
RTN3-205ENST00000356000 G3V2L1 256 aa15.77■□□□□ 0.11
RTN3-205ENST00000356000 TRIM13O60858 407 aa15.77■□□□□ 0.11
RTN3-205ENST00000356000 CCNE2O96020 404 aa15.77■□□□□ 0.11
RTN3-205ENST00000356000 ADRB2P07550 413 aa15.77■□□□□ 0.11
RTN3-205ENST00000356000 FCGR1AP12314 374 aa15.77■□□□□ 0.11
RTN3-205ENST00000356000 MMP8P22894 467 aa15.77■□□□□ 0.11
RTN3-205ENST00000356000 PSMA4P25789 261 aaKnown RBP15.77■□□□□ 0.11
RTN3-205ENST00000356000 GTF2E2P29084 291 aaKnown RBP15.77■□□□□ 0.11
RTN3-205ENST00000356000 NOVP48745 357 aa15.77■□□□□ 0.11
RTN3-205ENST00000356000 OGDHQ02218 1023 aa15.77■□□□□ 0.11
RTN3-205ENST00000356000 TBRG1Q3YBR2 411 aa15.77■□□□□ 0.11
RTN3-205ENST00000356000 PPM1JQ5JR12 505 aa15.77■□□□□ 0.11
RTN3-205ENST00000356000 NLGN4XQ8N0W4 816 aa15.77■□□□□ 0.11
RTN3-205ENST00000356000 MCFD2Q8NI22 146 aa15.77■□□□□ 0.11
RTN3-205ENST00000356000 SEPT1Q8WYJ6 367 aa15.77■□□□□ 0.11
RTN3-205ENST00000356000 SIGLEC10Q96LC7 697 aa15.77■□□□□ 0.11
RTN3-205ENST00000356000 HSFY1Q96LI6 401 aa15.77■□□□□ 0.11
RTN3-205ENST00000356000 EBNA1BP2Q99848 306 aaKnown RBP15.77■□□□□ 0.11
RTN3-205ENST00000356000 ZNF577Q9BSK1 485 aa15.77■□□□□ 0.11
RTN3-205ENST00000356000 TEX13BQ9BXU2 312 aa15.77■□□□□ 0.11
RTN3-205ENST00000356000 FTHL17Q9BXU8 183 aa15.77■□□□□ 0.11
RTN3-205ENST00000356000 ZC3H12CQ9C0D7 883 aaKnown RBP15.77■□□□□ 0.11
RTN3-205ENST00000356000 FARSBQ9NSD9 589 aaKnown RBP15.77■□□□□ 0.11
RTN3-205ENST00000356000 VTI1BQ9UEU0 232 aa15.77■□□□□ 0.11
RTN3-205ENST00000356000 ATP6V1HQ9UI12 483 aa15.77■□□□□ 0.11
RTN3-205ENST00000356000 NUP98P52948 1817 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 USP17L15C9J2P7 530 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 USP17L13C9JLJ4 530 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 USP17L11C9JVI0 530 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 USP17L18D6R9N7 530 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 USP17L22D6RA61 530 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 USP17L17D6RBQ6 530 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 USP17L19D6RCP7 530 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 USP17L20D6RJB6 530 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 APOC4-APOC2K7ER74 178 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 APOC2P02655 101 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 CHRNGP07510 517 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 IL7P13232 177 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 TFEBP19484 476 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 IL1R2P27930 398 aa15.76■□□□□ 0.11
RTN3-205ENST00000356000 EIF6P56537 245 aaKnown RBP15.76■□□□□ 0.11
RTN3-205ENST00000356000 DEFA1P59665 94 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms