RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 BRAT1Q6PJG6 821 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 PACS1Q6VY07 963 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 TRABD2AQ86V40 505 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 CNTN4Q8IWV2 1026 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 SRRM1Q8IYB3 904 aaKnown RBP15.64■□□□□ 0.09
CTSA-202ENST00000354880 TTC30BQ8N4P2 665 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 OR6P1Q8NGX9 317 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 DNASE1L2Q92874 299 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 NLE1Q9NVX2 485 aaPredicted RBP15.64■□□□□ 0.09
CTSA-202ENST00000354880 HCN2Q9UL51 889 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 PPIL1Q9Y3C6 166 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 ACTL7BQ9Y614 415 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 TCF20Q9UGU0 1960 aaKnown RBP15.64■□□□□ 0.09
CTSA-202ENST00000354880 CAPN8A6NHC0 703 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 FOXO6A8MYZ6 492 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 RPP40O75818 363 aaKnown RBP15.64■□□□□ 0.09
CTSA-202ENST00000354880 SLC4A1P02730 911 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 ASGR2P07307 311 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 SNRPAP09012 282 aaKnown RBP15.64■□□□□ 0.09
CTSA-202ENST00000354880 CNTFP26441 200 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 HNF1BP35680 557 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 IL12RB1P42701 662 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 TNFRSF4P43489 277 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 TMPRSS15P98073 1019 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 C9orf64Q5T6V5 341 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 EGFLAMQ63HQ2 1017 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 PTCRAQ6ISU1 281 aaPredicted RBP15.64■□□□□ 0.09
CTSA-202ENST00000354880 NEPROQ6NW34 567 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 TXNDC11Q6PKC3 985 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 STRA8Q7Z7C7 330 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 OR4K2Q8NGD2 314 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 GABPB2Q8TAK5 448 aaPredicted RBP15.64■□□□□ 0.09
CTSA-202ENST00000354880 CALML6Q8TD86 181 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 MZB1Q8WU39 189 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 SCRN2Q96FV2 425 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 TBATAQ96M53 351 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 LYSMD1Q96S90 227 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 FAM167BQ9BTA0 163 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 GPR63Q9BZJ6 419 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 MFSD1Q9H3U5 465 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 HEBP1Q9NRV9 189 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 SENP1Q9P0U3 644 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 GGT7Q9UJ14 662 aa15.64■□□□□ 0.09
CTSA-202ENST00000354880 COL6A3P12111 3177 aa15.63■□□□□ 0.09
CTSA-202ENST00000354880 COL4A2P08572 1712 aa15.63■□□□□ 0.09
CTSA-202ENST00000354880 ANTXRLA6NF34 631 aa15.63■□□□□ 0.09
CTSA-202ENST00000354880 CCL22O00626 93 aa15.63■□□□□ 0.09
CTSA-202ENST00000354880 STX7O15400 261 aaKnown RBP15.63■□□□□ 0.09
CTSA-202ENST00000354880 SIN3BO75182 1162 aa15.63■□□□□ 0.09
CTSA-202ENST00000354880 HNRNPLP14866 589 aaKnown RBP eCLIP15.63■□□□□ 0.09
CTSA-202ENST00000354880 PSMA3P25788 255 aa15.63■□□□□ 0.09
CTSA-202ENST00000354880 HMGCLP35914 325 aa15.63■□□□□ 0.09
CTSA-202ENST00000354880 ELAVL3Q14576 367 aaKnown RBP15.63■□□□□ 0.09
CTSA-202ENST00000354880 E2F5Q15329 346 aa15.63■□□□□ 0.09
CTSA-202ENST00000354880 GRTP1Q5TC63 336 aa15.63■□□□□ 0.09
CTSA-202ENST00000354880 EMC10Q5UCC4 262 aa15.63■□□□□ 0.09
CTSA-202ENST00000354880 USP45Q70EL2 814 aa15.63■□□□□ 0.09
CTSA-202ENST00000354880 LYSMD3Q7Z3D4 306 aa15.63■□□□□ 0.09
CTSA-202ENST00000354880 RALGPS2Q86X27 583 aaPredicted RBP15.63■□□□□ 0.09
CTSA-202ENST00000354880 CNPY4Q8N129 248 aa15.63■□□□□ 0.09
CTSA-202ENST00000354880 STK40Q8N2I9 435 aa15.63■□□□□ 0.09
CTSA-202ENST00000354880 OR8D1Q8WZ84 308 aa15.63■□□□□ 0.09
CTSA-202ENST00000354880 MTBPQ96DY7 904 aa15.63■□□□□ 0.09
CTSA-202ENST00000354880 CDKN2AIPNLQ96HQ2 116 aa15.63■□□□□ 0.09
CTSA-202ENST00000354880 C8orf33Q9H7E9 229 aaPredicted RBP15.63■□□□□ 0.09
CTSA-202ENST00000354880 ZDHHC4Q9NPG8 344 aa15.63■□□□□ 0.09
CTSA-202ENST00000354880 CACNA2D2Q9NY47 1150 aa15.63■□□□□ 0.09
CTSA-202ENST00000354880 SUN2Q9UH99 717 aa15.63■□□□□ 0.09
CTSA-202ENST00000354880 PIAS3Q9Y6X2 628 aa15.63■□□□□ 0.09
CTSA-202ENST00000354880 TRIOO75962 3097 aa15.62■□□□□ 0.09
CTSA-202ENST00000354880 A0A0U1RQS6 177 aa15.62■□□□□ 0.09
CTSA-202ENST00000354880 C1orf232A0A0U1RR37 186 aa15.62■□□□□ 0.09
CTSA-202ENST00000354880 A0A1W2PPM1 405 aa15.62■□□□□ 0.09
CTSA-202ENST00000354880 K7EQS6 105 aa15.62■□□□□ 0.09
CTSA-202ENST00000354880 NPC1O15118 1278 aa15.62■□□□□ 0.09
CTSA-202ENST00000354880 PRNPP04156 253 aa15.62■□□□□ 0.09
CTSA-202ENST00000354880 EPHX1P07099 455 aa15.62■□□□□ 0.09
CTSA-202ENST00000354880 HADHAP40939 763 aa15.62■□□□□ 0.09
CTSA-202ENST00000354880 CSE1LP55060 971 aaKnown RBP15.62■□□□□ 0.09
CTSA-202ENST00000354880 PPP2R2AP63151 447 aa15.62■□□□□ 0.09
CTSA-202ENST00000354880 ZNF805Q5CZA5 627 aa15.62■□□□□ 0.09
CTSA-202ENST00000354880 MROH9Q5TGP6 573 aa15.62■□□□□ 0.09
CTSA-202ENST00000354880 ZNF470Q6ECI4 717 aa15.62■□□□□ 0.09
CTSA-202ENST00000354880 PTAR1Q7Z6K3 402 aaPredicted RBP15.62■□□□□ 0.09
CTSA-202ENST00000354880 LMNTD2Q8IXW0 634 aa15.62■□□□□ 0.09
CTSA-202ENST00000354880 ZNF513Q8N8E2 541 aaPredicted RBP15.62■□□□□ 0.09
CTSA-202ENST00000354880 HCAR2Q8TDS4 363 aa15.62■□□□□ 0.09
CTSA-202ENST00000354880 MCCC1Q96RQ3 725 aaPredicted RBP15.62■□□□□ 0.09
CTSA-202ENST00000354880 ACOX2Q99424 681 aa15.62■□□□□ 0.09
CTSA-202ENST00000354880 SUDS3Q9H7L9 328 aaPredicted RBP15.62■□□□□ 0.09
CTSA-202ENST00000354880 ZFYVE1Q9HBF4 777 aa15.62■□□□□ 0.09
CTSA-202ENST00000354880 POLR3BQ9NW08 1133 aaPredicted RBP15.62■□□□□ 0.09
CTSA-202ENST00000354880 IL17CQ9P0M4 197 aa15.62■□□□□ 0.09
CTSA-202ENST00000354880 PKP3Q9Y446 797 aa15.62■□□□□ 0.09
CTSA-202ENST00000354880 TSPAN11A1L157 253 aa15.61■□□□□ 0.09
CTSA-202ENST00000354880 NPIPB15A6NHN6 443 aaPredicted RBP15.61■□□□□ 0.09
CTSA-202ENST00000354880 TRIM49D1C9J1S8 452 aa15.61■□□□□ 0.09
CTSA-202ENST00000354880 GOT2P00505 430 aaKnown RBP15.61■□□□□ 0.09
CTSA-202ENST00000354880 MT-ND3P03897 115 aa15.61■□□□□ 0.09
CTSA-202ENST00000354880 CREB1P16220 341 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms