RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 TYW5A2RUC4 315 aaKnown RBP16.73■□□□□ 0.27
SAMM50-201ENST00000350028 C2orf81A6NN90 581 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 F8W8V4 182 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 H0Y626 953 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 BUD23O43709 281 aaKnown RBP16.73■□□□□ 0.27
SAMM50-201ENST00000350028 TBL1XO60907 577 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 TM7SF2O76062 418 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 ANP32DO95626 131 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 OLFM2O95897 454 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 C1RP00736 705 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 PRLP01236 227 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 PIRTP0C851 137 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 COPAP53621 1224 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 CDKN2DP55273 166 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 WDR5P61964 334 aaKnown RBP16.73■□□□□ 0.27
SAMM50-201ENST00000350028 ARF5P84085 180 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 PTPRCAPQ14761 206 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 TYSND1Q2T9J0 566 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 INO80DQ53TQ3 878 aaPredicted RBP16.73■□□□□ 0.27
SAMM50-201ENST00000350028 TRIM67Q6ZTA4 783 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 SCUBE1Q8IWY4 988 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 SGF29Q96ES7 293 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 NSMCE3Q96MG7 304 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 ADGRE3Q9BY15 652 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 ZNF334Q9HCZ1 680 aaPredicted RBP16.73■□□□□ 0.27
SAMM50-201ENST00000350028 SPO11Q9Y5K1 396 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 RAI2Q9Y5P3 530 aa16.73■□□□□ 0.27
SAMM50-201ENST00000350028 ZMPSTE24O75844 475 aa16.72■□□□□ 0.27
SAMM50-201ENST00000350028 IPO13O94829 963 aaKnown RBP16.72■□□□□ 0.27
SAMM50-201ENST00000350028 PENKP01210 267 aaPredicted RBP16.72■□□□□ 0.27
SAMM50-201ENST00000350028 CCR10P46092 362 aa16.72■□□□□ 0.27
SAMM50-201ENST00000350028 SUOXP51687 545 aa16.72■□□□□ 0.27
SAMM50-201ENST00000350028 KLF10Q13118 480 aa16.72■□□□□ 0.27
SAMM50-201ENST00000350028 NAA25Q14CX7 972 aa16.72■□□□□ 0.27
SAMM50-201ENST00000350028 RALGPS1Q5JS13 557 aa16.72■□□□□ 0.27
SAMM50-201ENST00000350028 ZNF549Q6P9A3 640 aa16.72■□□□□ 0.27
SAMM50-201ENST00000350028 AFTPHQ6ULP2 937 aa16.72■□□□□ 0.27
SAMM50-201ENST00000350028 GLT6D1Q7Z4J2 308 aa16.72■□□□□ 0.27
SAMM50-201ENST00000350028 TMCO2Q7Z6W1 182 aaPredicted RBP16.72■□□□□ 0.27
SAMM50-201ENST00000350028 CARNMT1Q8N4J0 409 aa16.72■□□□□ 0.27
SAMM50-201ENST00000350028 FBXO27Q8NI29 283 aa16.72■□□□□ 0.27
SAMM50-201ENST00000350028 AGR3Q8TD06 166 aa16.72■□□□□ 0.27
SAMM50-201ENST00000350028 ANKRD49Q8WVL7 239 aa16.72■□□□□ 0.27
SAMM50-201ENST00000350028 AUTS2Q8WXX7 1259 aa16.72■□□□□ 0.27
SAMM50-201ENST00000350028 MOCOSQ96EN8 888 aa16.72■□□□□ 0.27
SAMM50-201ENST00000350028 TMA16Q96EY4 203 aaKnown RBP16.72■□□□□ 0.27
SAMM50-201ENST00000350028 FAR2Q96K12 515 aa16.72■□□□□ 0.27
SAMM50-201ENST00000350028 EXOC2Q96KP1 924 aa16.72■□□□□ 0.27
SAMM50-201ENST00000350028 OR52B2Q96RD2 323 aa16.72■□□□□ 0.27
SAMM50-201ENST00000350028 CYP2S1Q96SQ9 504 aa16.72■□□□□ 0.27
SAMM50-201ENST00000350028 TCF12Q99081 682 aa16.72■□□□□ 0.27
SAMM50-201ENST00000350028 UNKQ9C0B0 810 aaKnown RBP16.72■□□□□ 0.27
SAMM50-201ENST00000350028 IL21Q9HBE4 155 aa16.72■□□□□ 0.27
SAMM50-201ENST00000350028 EML4Q9HC35 981 aaKnown RBP16.72■□□□□ 0.27
SAMM50-201ENST00000350028 NKX1-2Q9UD57 310 aaPredicted RBP16.72■□□□□ 0.27
SAMM50-201ENST00000350028 SSX2IPQ9Y2D8 614 aa16.72■□□□□ 0.27
SAMM50-201ENST00000350028 CRYL1Q9Y2S2 319 aa16.72■□□□□ 0.27
SAMM50-201ENST00000350028 A8MT66 165 aa16.71■□□□□ 0.27
SAMM50-201ENST00000350028 GFRA2O00451 464 aa16.71■□□□□ 0.27
SAMM50-201ENST00000350028 SLC22A2O15244 555 aa16.71■□□□□ 0.27
SAMM50-201ENST00000350028 TEX28O15482 410 aa16.71■□□□□ 0.27
SAMM50-201ENST00000350028 LILRB3O75022 631 aa16.71■□□□□ 0.27
SAMM50-201ENST00000350028 ENTPD5O75356 428 aa16.71■□□□□ 0.27
SAMM50-201ENST00000350028 CIB2O75838 187 aa16.71■□□□□ 0.27
SAMM50-201ENST00000350028 TMCC1O94876 653 aa16.71■□□□□ 0.27
SAMM50-201ENST00000350028 LUC7L3O95232 432 aaKnown RBP16.71■□□□□ 0.27
SAMM50-201ENST00000350028 CD160O95971 181 aa16.71■□□□□ 0.27
SAMM50-201ENST00000350028 TIMP1P01033 207 aa16.71■□□□□ 0.27
SAMM50-201ENST00000350028 TPBGLP0DKB5 382 aa16.71■□□□□ 0.27
SAMM50-201ENST00000350028 HDCP19113 662 aa16.71■□□□□ 0.27
SAMM50-201ENST00000350028 LPOP22079 712 aaPredicted RBP16.71■□□□□ 0.27
SAMM50-201ENST00000350028 PMLP29590 882 aa16.71■□□□□ 0.27
SAMM50-201ENST00000350028 ADSLP30566 484 aaPredicted RBP16.71■□□□□ 0.27
SAMM50-201ENST00000350028 CPOXP36551 454 aa16.71■□□□□ 0.27
SAMM50-201ENST00000350028 STC1P52823 247 aa16.71■□□□□ 0.27
SAMM50-201ENST00000350028 SEMA3AQ14563 771 aa16.71■□□□□ 0.27
SAMM50-201ENST00000350028 KPNB1Q14974 876 aaKnown RBP16.71■□□□□ 0.27
SAMM50-201ENST00000350028 C6orf163Q5TEZ5 329 aa16.71■□□□□ 0.27
SAMM50-201ENST00000350028 NCEH1Q6PIU2 408 aa16.71■□□□□ 0.27
SAMM50-201ENST00000350028 TMEM207Q6UWW9 146 aa16.71■□□□□ 0.27
SAMM50-201ENST00000350028 Q6ZNB5 142 aa16.71■□□□□ 0.27
SAMM50-201ENST00000350028 NET1Q7Z628 596 aaPredicted RBP16.71■□□□□ 0.27
SAMM50-201ENST00000350028 KIRREL3Q8IZU9 778 aa16.71■□□□□ 0.27
SAMM50-201ENST00000350028 AFAP1L2Q8N4X5 818 aa16.71■□□□□ 0.27
SAMM50-201ENST00000350028 ARL14EPQ8N8R7 260 aaPredicted RBP16.71■□□□□ 0.27
SAMM50-201ENST00000350028 KDM1BQ8NB78 822 aa16.71■□□□□ 0.27
SAMM50-201ENST00000350028 LPCAT1Q8NF37 534 aa16.71■□□□□ 0.27
SAMM50-201ENST00000350028 FAM161BQ96MY7 647 aa16.71■□□□□ 0.27
SAMM50-201ENST00000350028 AARSD1Q9BTE6 412 aaKnown RBP16.71■□□□□ 0.27
SAMM50-201ENST00000350028 ACSS2Q9NR19 701 aa16.71■□□□□ 0.27
SAMM50-201ENST00000350028 MAN1C1Q9NR34 630 aa16.71■□□□□ 0.27
SAMM50-201ENST00000350028 CDYLQ9Y232 598 aa16.71■□□□□ 0.27
SAMM50-201ENST00000350028 TRPC5OSA6NMA1 111 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 E9PBE3 544 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 DCXO43602 365 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 GREM1O60565 184 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 KLHL41O60662 606 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 CCNG1P51959 295 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 GALNT1Q10472 559 aaPredicted RBP16.7■□□□□ 0.26
SAMM50-201ENST00000350028 KHDC1Q4VXA5 237 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms