RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 LIMD1Q9UGP4 676 aa15.54■□□□□ 0.08
SRPK1-201ENST00000346162 TMEM59LQ9UK28 342 aa15.54■□□□□ 0.08
SRPK1-201ENST00000346162 FOXD2O60548 495 aaPredicted RBP15.54■□□□□ 0.08
SRPK1-201ENST00000346162 URODP06132 367 aa15.54■□□□□ 0.08
SRPK1-201ENST00000346162 MRPS6P82932 125 aaKnown RBP15.54■□□□□ 0.08
SRPK1-201ENST00000346162 PPP4R4Q6NUP7 873 aa15.54■□□□□ 0.08
SRPK1-201ENST00000346162 PLD5Q8N7P1 536 aa15.54■□□□□ 0.08
SRPK1-201ENST00000346162 LPPQ93052 612 aa15.54■□□□□ 0.08
SRPK1-201ENST00000346162 TRIM45Q9H8W5 580 aaPredicted RBP15.54■□□□□ 0.08
SRPK1-201ENST00000346162 RRAGCQ9HB90 399 aa15.54■□□□□ 0.08
SRPK1-201ENST00000346162 SMPD4Q9NXE4 827 aa15.54■□□□□ 0.08
SRPK1-201ENST00000346162 GDAP2Q9NXN4 497 aa15.54■□□□□ 0.08
SRPK1-201ENST00000346162 MBD2Q9UBB5 411 aa15.54■□□□□ 0.08
SRPK1-201ENST00000346162 CRNNQ9UBG3 495 aaPredicted RBP15.54■□□□□ 0.08
SRPK1-201ENST00000346162 VPS51Q9UID3 782 aa15.54■□□□□ 0.08
SRPK1-201ENST00000346162 ST3GAL5Q9UNP4 418 aa15.54■□□□□ 0.08
SRPK1-201ENST00000346162 DERAQ9Y315 318 aa15.54■□□□□ 0.08
SRPK1-201ENST00000346162 DARSP14868 501 aaKnown RBP15.53■□□□□ 0.08
SRPK1-201ENST00000346162 HOXD13P35453 343 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 PPP3CCP48454 512 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 ZNF280AP59817 542 aaPredicted RBP15.53■□□□□ 0.08
SRPK1-201ENST00000346162 GBE1Q04446 702 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 LGI2Q8N0V4 545 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 FBXO39Q8N4B4 442 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 ITFG1Q8TB96 612 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 LRTOMTQ8WZ04 291 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 C12orf42Q96LP6 360 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 LENG8Q96PV6 779 aaPredicted RBP15.53■□□□□ 0.08
SRPK1-201ENST00000346162 NPAS2Q99743 824 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 PLLPQ9Y342 182 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 RAD54BQ9Y620 910 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 RGPD2P0DJD1 1756 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 SMIM28A0A1B0GU29 152 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 SLC25A52Q3SY17 297 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 KBTBD7Q8WVZ9 684 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 GOLGA2P5Q9HBQ8 144 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 EGFL7Q9UHF1 273 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 ING4Q9UNL4 249 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 ZNF541Q9H0D2 1346 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 TSPAN3O60637 253 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 TMCC2O75069 709 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 FSTL1Q12841 308 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 DNASE1L3Q13609 305 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 ZNF284Q2VY69 593 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 TIMM50Q3ZCQ8 353 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 ANKS6Q68DC2 871 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 NUDT18Q6ZVK8 323 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 ADCK2Q7Z695 626 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 SLC4A11Q8NBS3 891 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 CDK5RAP1Q96SZ6 601 aaKnown RBP15.53■□□□□ 0.08
SRPK1-201ENST00000346162 ACAT2Q9BWD1 397 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 KLHL31Q9H511 634 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 PDZD7Q9H5P4 517 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 CRYL1Q9Y2S2 319 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 PTCH2Q9Y6C5 1203 aa15.53■□□□□ 0.08
SRPK1-201ENST00000346162 COL1A2P08123 1366 aa15.52■□□□□ 0.08
SRPK1-201ENST00000346162 SNRPB2P08579 225 aaKnown RBP15.52■□□□□ 0.08
SRPK1-201ENST00000346162 ATN1P54259 1190 aaPredicted RBP15.52■□□□□ 0.08
SRPK1-201ENST00000346162 TNK2Q07912 1038 aa15.52■□□□□ 0.08
SRPK1-201ENST00000346162 LRRC74AQ0VAA2 488 aa15.52■□□□□ 0.08
SRPK1-201ENST00000346162 HERC3Q15034 1050 aa15.52■□□□□ 0.08
SRPK1-201ENST00000346162 RETSATQ6NUM9 610 aa15.52■□□□□ 0.08
SRPK1-201ENST00000346162 RRM2BQ7LG56 351 aa15.52■□□□□ 0.08
SRPK1-201ENST00000346162 RAB42Q8N4Z0 105 aa15.52■□□□□ 0.08
SRPK1-201ENST00000346162 ZNF540Q8NDQ6 660 aa15.52■□□□□ 0.08
SRPK1-201ENST00000346162 CSPG4P5Q96PW8 444 aa15.52■□□□□ 0.08
SRPK1-201ENST00000346162 HGH1Q9BTY7 390 aa15.52■□□□□ 0.08
SRPK1-201ENST00000346162 ELOVL6Q9H5J4 265 aa15.52■□□□□ 0.08
SRPK1-201ENST00000346162 ADAM28Q9UKQ2 775 aa15.52■□□□□ 0.08
SRPK1-201ENST00000346162 PRKACBP22694 351 aa15.52■□□□□ 0.08
SRPK1-201ENST00000346162 NR6A1Q15406 480 aa15.52■□□□□ 0.08
SRPK1-201ENST00000346162 MZT2BQ6NZ67 158 aa15.52■□□□□ 0.08
SRPK1-201ENST00000346162 ZNF276Q8N554 614 aa15.52■□□□□ 0.08
SRPK1-201ENST00000346162 TOP6BLQ8N6T0 577 aa15.52■□□□□ 0.08
SRPK1-201ENST00000346162 SLC44A1Q8WWI5 657 aa15.52■□□□□ 0.08
SRPK1-201ENST00000346162 NXNL1Q96CM4 212 aa15.52■□□□□ 0.08
SRPK1-201ENST00000346162 MID1IP1Q9NPA3 183 aa15.52■□□□□ 0.08
SRPK1-201ENST00000346162 C3orf18Q9UK00 162 aa15.52■□□□□ 0.08
SRPK1-201ENST00000346162 ARPC4-TTLL3A0A0A6YYG9 625 aa15.52■□□□□ 0.07
SRPK1-201ENST00000346162 TMEM114B3SHH9 223 aa15.52■□□□□ 0.07
SRPK1-201ENST00000346162 ZNF682O95780 498 aa15.52■□□□□ 0.07
SRPK1-201ENST00000346162 SERPIND1P05546 499 aa15.52■□□□□ 0.07
SRPK1-201ENST00000346162 CD48P09326 243 aa15.52■□□□□ 0.07
SRPK1-201ENST00000346162 GABRB2P47870 512 aa15.52■□□□□ 0.07
SRPK1-201ENST00000346162 SLC9A3P48764 834 aa15.52■□□□□ 0.07
SRPK1-201ENST00000346162 SLC7A2P52569 658 aa15.52■□□□□ 0.07
SRPK1-201ENST00000346162 ILF2Q12905 390 aaKnown RBP15.52■□□□□ 0.07
SRPK1-201ENST00000346162 CYP1B1Q16678 543 aa15.52■□□□□ 0.07
SRPK1-201ENST00000346162 PLET1Q6UQ28 207 aa15.52■□□□□ 0.07
SRPK1-201ENST00000346162 FAM35AQ86V20 835 aa15.52■□□□□ 0.07
SRPK1-201ENST00000346162 MYLPFQ96A32 169 aa15.52■□□□□ 0.07
SRPK1-201ENST00000346162 ADI1Q9BV57 179 aa15.52■□□□□ 0.07
SRPK1-201ENST00000346162 POLR1EQ9GZS1 481 aaKnown RBP15.52■□□□□ 0.07
SRPK1-201ENST00000346162 WDR55Q9H6Y2 383 aaPredicted RBP15.52■□□□□ 0.07
SRPK1-201ENST00000346162 FUT4P22083 530 aa15.52■□□□□ 0.07
SRPK1-201ENST00000346162 TRIP4Q15650 581 aaPredicted RBP15.52■□□□□ 0.07
SRPK1-201ENST00000346162 CA9Q16790 459 aa15.52■□□□□ 0.07
SRPK1-201ENST00000346162 RNASEH2BQ5TBB1 312 aaKnown RBP15.52■□□□□ 0.07
SRPK1-201ENST00000346162 PMF1Q6P1K2 205 aa15.52■□□□□ 0.07
SRPK1-201ENST00000346162 LPGAT1Q92604 370 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms