RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 GLRA2P23416 452 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 AMHR2Q16671 573 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 UBE2Q1Q7Z7E8 422 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 TRIM74Q86UV6 250 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 TRIM73Q86UV7 250 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 C4orf19Q8IY42 314 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 TMEM192Q8IY95 271 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 DNAJB4Q9UDY4 337 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 WRBO00258 174 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 PGRP06401 933 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 METTL21CQ5VZV1 264 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 SYCE2Q6PIF2 218 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 FOXR1Q6PIV2 292 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 FOXR2Q6PJQ5 311 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 CNTD1Q8N815 330 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 OR52E6Q96RD3 313 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 IFNA16P05015 189 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 RPL4P36578 427 aaKnown RBP19.42■□□□□ 0.7
HDAC4-201ENST00000345617 GALNT15Q8N3T1 639 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 PANX1Q96RD7 426 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 XKR8Q9H6D3 395 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 RABL2AQ9UBK7 228 aaPredicted RBP19.42■□□□□ 0.7
HDAC4-201ENST00000345617 RABL2BQ9UNT1 228 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 CYP1A2P05177 515 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 PIK3CBP42338 1070 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 ZCCHC23Q6ZST2 131 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 PLK2Q9NYY3 685 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 CDH22Q9UJ99 828 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 SGCGQ13326 291 aa19.41■□□□□ 0.7
HDAC4-201ENST00000345617 PGAM4Q8N0Y7 254 aa19.41■□□□□ 0.7
HDAC4-201ENST00000345617 SEMA3GQ9NS98 782 aa19.41■□□□□ 0.7
HDAC4-201ENST00000345617 EXD2Q9NVH0 621 aa19.41■□□□□ 0.7
HDAC4-201ENST00000345617 FAM172BPA6NC97 362 aa19.41■□□□□ 0.7
HDAC4-201ENST00000345617 MCIDASD6RGH6 385 aa19.41■□□□□ 0.7
HDAC4-201ENST00000345617 GRB14Q14449 540 aa19.41■□□□□ 0.7
HDAC4-201ENST00000345617 FBXO43Q4G163 708 aa19.41■□□□□ 0.7
HDAC4-201ENST00000345617 GRHL2Q6ISB3 625 aa19.41■□□□□ 0.7
HDAC4-201ENST00000345617 KIAA0895Q8NCT3 520 aa19.41■□□□□ 0.7
HDAC4-201ENST00000345617 ZNF548Q8NEK5 533 aaPredicted RBP19.41■□□□□ 0.7
HDAC4-201ENST00000345617 TAS1R2Q8TE23 839 aa19.41■□□□□ 0.7
HDAC4-201ENST00000345617 IL1RAPQ9NPH3 570 aa19.41■□□□□ 0.7
HDAC4-201ENST00000345617 SEMA4BQ9NPR2 832 aaPredicted RBP19.41■□□□□ 0.7
HDAC4-201ENST00000345617 NOL4O94818 638 aa19.41■□□□□ 0.7
HDAC4-201ENST00000345617 GNRH1P01148 92 aa19.41■□□□□ 0.7
HDAC4-201ENST00000345617 PBLDP30039 288 aaPredicted RBP19.41■□□□□ 0.7
HDAC4-201ENST00000345617 CLNKQ7Z7G1 428 aa19.41■□□□□ 0.7
HDAC4-201ENST00000345617 SCGB3A2Q96PL1 93 aa19.41■□□□□ 0.7
HDAC4-201ENST00000345617 IGFBP5P24593 272 aa19.41■□□□□ 0.7
HDAC4-201ENST00000345617 RSL1D1O76021 490 aaKnown RBP19.41■□□□□ 0.7
HDAC4-201ENST00000345617 AXLP30530 894 aa19.41■□□□□ 0.7
HDAC4-201ENST00000345617 ADAM8P78325 824 aa19.41■□□□□ 0.7
HDAC4-201ENST00000345617 CELF1Q92879 486 aaKnown RBP19.41■□□□□ 0.7
HDAC4-201ENST00000345617 FAM50BQ9Y247 325 aa19.41■□□□□ 0.7
HDAC4-201ENST00000345617 NKRFO15226 690 aaKnown RBP eCLIP19.41■□□□□ 0.79e-7■■■□□ 17.7
HDAC4-201ENST00000345617 C9P02748 559 aa19.41■□□□□ 0.7
HDAC4-201ENST00000345617 PITPNM1O00562 1244 aa19.41■□□□□ 0.7
HDAC4-201ENST00000345617 NR2F1P10589 423 aa19.41■□□□□ 0.7
HDAC4-201ENST00000345617 ACADMP11310 421 aa19.41■□□□□ 0.7
HDAC4-201ENST00000345617 KDELR1P24390 212 aa19.41■□□□□ 0.7
HDAC4-201ENST00000345617 AIF1P55008 147 aa19.41■□□□□ 0.7
HDAC4-201ENST00000345617 STXBP5Q5T5C0 1151 aa19.41■□□□□ 0.7
HDAC4-201ENST00000345617 ZPBP2Q6X784 338 aa19.41■□□□□ 0.7
HDAC4-201ENST00000345617 FADS2O95864 444 aaKnown RBP19.4■□□□□ 0.7
HDAC4-201ENST00000345617 SUPT20HL2P0C7V6 817 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 TUBP50607 506 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 ARMC12Q5T9G4 340 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 LRRC69Q6ZNQ3 347 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 HEXDCQ8WVB3 486 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 ZNF304Q9HCX3 659 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 XPR1Q9UBH6 696 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 EGFLAMQ63HQ2 1017 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 RNF180Q86T96 592 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 MKL1Q969V6 931 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 CENPNQ96H22 339 aaPredicted RBP19.4■□□□□ 0.7
HDAC4-201ENST00000345617 SSU72Q9NP77 194 aaKnown RBP19.4■□□□□ 0.7
HDAC4-201ENST00000345617 THG1LQ9NWX6 298 aaKnown RBP19.4■□□□□ 0.7
HDAC4-201ENST00000345617 FADS2P1A8MWK0 482 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 SCGNO76038 276 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 ETS2P15036 469 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 TNNI3P19429 210 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 PSEN1P49768 467 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 ZNF143P52747 638 aaPredicted RBP19.4■□□□□ 0.7
HDAC4-201ENST00000345617 MYBPC1Q00872 1141 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 PLEKHG6Q3KR16 790 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 ZC3H7AQ8IWR0 971 aaKnown RBP19.4■□□□□ 0.7
HDAC4-201ENST00000345617 TMEM86AQ8N2M4 240 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 C2orf49Q9BVC5 232 aaPredicted RBP19.4■□□□□ 0.7
HDAC4-201ENST00000345617 EPORP19235 508 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 NAGLUP54802 743 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 SV2AQ7L0J3 742 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.4■□□□□ 0.7
HDAC4-201ENST00000345617 DNERQ8NFT8 737 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 ZNF432O94892 652 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 CDH5P33151 784 aaPredicted RBP19.4■□□□□ 0.7
HDAC4-201ENST00000345617 CRHR1P34998 444 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 LSM3P62310 102 aaKnown RBP19.4■□□□□ 0.7
HDAC4-201ENST00000345617 BST1Q10588 318 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 TMC8Q8IU68 726 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 TLL2Q9Y6L7 1015 aa19.4■□□□□ 0.7
HDAC4-201ENST00000345617 MAP3K6O95382 1288 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms