RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 E2F8A0AVK6 867 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 TTC24A2A3L6 582 aaPredicted RBP12.88□□□□□ -0.35
CLK3-201ENST00000345005 SCAMP3O14828 347 aaKnown RBP12.88□□□□□ -0.35
CLK3-201ENST00000345005 MUSKO15146 869 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 RFPL2O75678 378 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 PIM1P11309 404 aaPredicted RBP12.88□□□□□ -0.35
CLK3-201ENST00000345005 MYOGP15173 224 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 AOC1P19801 751 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 HLA-DPA1P20036 260 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 GLDCP23378 1020 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 CRHR1P34998 444 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 IRS1P35568 1242 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 AVPR1AP37288 418 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 CAMK1Q14012 370 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 SEPT6Q14141 434 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 IHHQ14623 411 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 CYTH1Q15438 398 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 SIRPB2Q5JXA9 342 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 ELMSAN1Q6PJG2 1045 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 STRA8Q7Z7C7 330 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 TTC16Q8NEE8 873 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 GABPB2Q8TAK5 448 aaPredicted RBP12.88□□□□□ -0.35
CLK3-201ENST00000345005 DDI1Q8WTU0 396 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 WDR60Q8WVS4 1066 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 NCSTNQ92542 709 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 ZNF778Q96MU6 729 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 RBBP8Q99708 897 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 NMUR2Q9GZQ4 415 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 TASP1Q9H6P5 420 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 IARS2Q9NSE4 1012 aaKnown RBP12.88□□□□□ -0.35
CLK3-201ENST00000345005 SLC17A6Q9P2U8 582 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 DNMT3BQ9UBC3 853 aaKnown RBP12.88□□□□□ -0.35
CLK3-201ENST00000345005 COMMD3-BMI1R4GMX3 469 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 PAPSS2O95340 614 aaPredicted RBP12.88□□□□□ -0.35
CLK3-201ENST00000345005 CYBBP04839 570 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 FGF1P05230 155 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 LYNP07948 512 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 RHOP08100 348 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 EPCAMP16422 314 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 HADHAP40939 763 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 CCR2P41597 374 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 ASPHQ12797 758 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 STX3Q13277 289 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 INO80DQ53TQ3 878 aaPredicted RBP12.88□□□□□ -0.35
CLK3-201ENST00000345005 FSCBQ5H9T9 825 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 C1orf146Q5VVC0 180 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 KIAA0930Q6ICG6 404 aaPredicted RBP12.88□□□□□ -0.35
CLK3-201ENST00000345005 ESRP1Q6NXG1 681 aaKnown RBP12.88□□□□□ -0.35
CLK3-201ENST00000345005 ACAD11Q709F0 780 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 BBS7Q8IWZ6 715 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 ULK2Q8IYT8 1036 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 CMTM8Q8IZV2 173 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 UCMAQ8WVF2 138 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 AGAP2Q99490 1192 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 SCUBE2Q9NQ36 999 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 TREX1Q9NSU2 369 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 ZMYM5Q9UJ78 669 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 VPS28Q9UK41 221 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 PLA2G4CQ9UP65 541 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 ARIH1Q9Y4X5 557 aaPredicted RBP12.88□□□□□ -0.35
CLK3-201ENST00000345005 OR51B4Q9Y5P0 310 aa12.88□□□□□ -0.35
CLK3-201ENST00000345005 INSIG1O15503 277 aa12.87□□□□□ -0.35
CLK3-201ENST00000345005 TIMM44O43615 452 aa12.87□□□□□ -0.35
CLK3-201ENST00000345005 SNNO75324 88 aaPredicted RBP12.87□□□□□ -0.35
CLK3-201ENST00000345005 ZMPSTE24O75844 475 aa12.87□□□□□ -0.35
CLK3-201ENST00000345005 ARHGEF15O94989 841 aa12.87□□□□□ -0.35
CLK3-201ENST00000345005 VAPBO95292 243 aa12.87□□□□□ -0.35
CLK3-201ENST00000345005 NDST3O95803 873 aa12.87□□□□□ -0.35
CLK3-201ENST00000345005 PENKP01210 267 aaPredicted RBP12.87□□□□□ -0.35
CLK3-201ENST00000345005 ENO1P06733 434 aaKnown RBP12.87□□□□□ -0.35
CLK3-201ENST00000345005 CA3P07451 260 aa12.87□□□□□ -0.35
CLK3-201ENST00000345005 ATXN1LP0C7T5 689 aaKnown RBP12.87□□□□□ -0.35
CLK3-201ENST00000345005 CR2P20023 1033 aa12.87□□□□□ -0.35
CLK3-201ENST00000345005 MZF1P28698 734 aaPredicted RBP12.87□□□□□ -0.35
CLK3-201ENST00000345005 NUMBP49757 651 aa12.87□□□□□ -0.35
CLK3-201ENST00000345005 SCNN1BP51168 640 aa12.87□□□□□ -0.35
CLK3-201ENST00000345005 LIMK2P53671 638 aa12.87□□□□□ -0.35
CLK3-201ENST00000345005 POLE2P56282 527 aa12.87□□□□□ -0.35
CLK3-201ENST00000345005 ERVK-21P61565 698 aa12.87□□□□□ -0.35
CLK3-201ENST00000345005 ARF5P84085 180 aa12.87□□□□□ -0.35
CLK3-201ENST00000345005 NSUN2Q08J23 767 aaKnown RBP eCLIP12.87□□□□□ -0.35
CLK3-201ENST00000345005 MSLNQ13421 630 aaPredicted RBP12.87□□□□□ -0.35
CLK3-201ENST00000345005 GPM6BQ13491 265 aa12.87□□□□□ -0.35
CLK3-201ENST00000345005 UGP2Q16851 508 aa12.87□□□□□ -0.35
CLK3-201ENST00000345005 LRRC23Q53EV4 343 aaPredicted RBP12.87□□□□□ -0.35
CLK3-201ENST00000345005 TSTD2Q5T7W7 516 aa12.87□□□□□ -0.35
CLK3-201ENST00000345005 RNF220Q5VTB9 566 aa12.87□□□□□ -0.35
CLK3-201ENST00000345005 RIPOR1Q6ZS17 1223 aa12.87□□□□□ -0.35
CLK3-201ENST00000345005 SPRED2Q7Z698 418 aa12.87□□□□□ -0.35
CLK3-201ENST00000345005 CNTN4Q8IWV2 1026 aa12.87□□□□□ -0.35
CLK3-201ENST00000345005 NDUFAF2Q8N183 169 aa12.87□□□□□ -0.35
CLK3-201ENST00000345005 RBM15BQ8NDT2 890 aaKnown RBP12.87□□□□□ -0.35
CLK3-201ENST00000345005 DTX3LQ8TDB6 740 aa12.87□□□□□ -0.35
CLK3-201ENST00000345005 ATP2A3Q93084 1043 aa12.87□□□□□ -0.35
CLK3-201ENST00000345005 CCDC106Q9BWC9 280 aa12.87□□□□□ -0.35
CLK3-201ENST00000345005 ATG2AQ2TAZ0 1938 aa12.86□□□□□ -0.35
CLK3-201ENST00000345005 SMIM31A0A1B0GVY4 71 aa12.86□□□□□ -0.35
CLK3-201ENST00000345005 CCDC78A2IDD5 438 aa12.86□□□□□ -0.35
CLK3-201ENST00000345005 GRXCR1A8MXD5 290 aa12.86□□□□□ -0.35
CLK3-201ENST00000345005 NRG2O14511 850 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms