RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 HADHQ16836 314 aaKnown RBP12.48□□□□□ -0.41
SGCA-202ENST00000344627 ZFYVE27Q5T4F4 411 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 TMCO4Q5TGY1 634 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 HGSNATQ68CP4 663 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 GUSBP11Q6P575 273 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 ALKBH5Q6P6C2 394 aaKnown RBP12.48□□□□□ -0.41
SGCA-202ENST00000344627 INO80CQ6PI98 192 aaPredicted RBP12.48□□□□□ -0.41
SGCA-202ENST00000344627 CRTC1Q6UUV9 634 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 POLNQ7Z5Q5 900 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 BBS5Q8N3I7 341 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 ATPAF2Q8N5M1 289 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 TMEM74Q96NL1 305 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 APOOQ9BUR5 198 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 B3GNT4Q9C0J1 378 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 ETNK2Q9NVF9 386 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.48□□□□□ -0.41
SGCA-202ENST00000344627 SIRPGQ9P1W8 387 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 ACSL6Q9UKU0 697 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 PADI4Q9UM07 663 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 SATB2Q9UPW6 733 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 PCDHGA7Q9Y5G6 932 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 BPTFQ12830 3046 aa12.48□□□□□ -0.41
SGCA-202ENST00000344627 A0A087X0T9 212 aa12.47□□□□□ -0.41
SGCA-202ENST00000344627 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.47□□□□□ -0.41
SGCA-202ENST00000344627 TSPAN11A1L157 253 aa12.47□□□□□ -0.41
SGCA-202ENST00000344627 NTN3O00634 580 aaPredicted RBP12.47□□□□□ -0.41
SGCA-202ENST00000344627 YY2O15391 372 aa12.47□□□□□ -0.41
SGCA-202ENST00000344627 HOXC4P09017 264 aaPredicted RBP12.47□□□□□ -0.41
SGCA-202ENST00000344627 ELFN1P0C7U0 828 aa12.47□□□□□ -0.41
SGCA-202ENST00000344627 FAM228BP0C875 321 aa12.47□□□□□ -0.41
SGCA-202ENST00000344627 TSHRP16473 764 aa12.47□□□□□ -0.41
SGCA-202ENST00000344627 NFKBIAP25963 317 aa12.47□□□□□ -0.41
SGCA-202ENST00000344627 PBX1P40424 430 aa12.47□□□□□ -0.41
SGCA-202ENST00000344627 HK3P52790 923 aa12.47□□□□□ -0.41
SGCA-202ENST00000344627 INHBCP55103 352 aa12.47□□□□□ -0.41
SGCA-202ENST00000344627 CDH6P55285 790 aa12.47□□□□□ -0.41
SGCA-202ENST00000344627 ITKQ08881 620 aa12.47□□□□□ -0.41
SGCA-202ENST00000344627 SLC10A7Q0GE19 358 aa12.47□□□□□ -0.41
SGCA-202ENST00000344627 PEX6Q13608 980 aa12.47□□□□□ -0.41
SGCA-202ENST00000344627 ACOX1Q15067 660 aa12.47□□□□□ -0.41
SGCA-202ENST00000344627 DPYSL2Q16555 572 aa12.47□□□□□ -0.41
SGCA-202ENST00000344627 CLPPQ16740 277 aaPredicted RBP12.47□□□□□ -0.41
SGCA-202ENST00000344627 C3orf38Q5JPI3 329 aa12.47□□□□□ -0.41
SGCA-202ENST00000344627 DENND2CQ68D51 928 aa12.47□□□□□ -0.41
SGCA-202ENST00000344627 ZSWIM9Q86XI8 627 aa12.47□□□□□ -0.41
SGCA-202ENST00000344627 IQCDQ96DY2 449 aa12.47□□□□□ -0.41
SGCA-202ENST00000344627 CSPG4P5Q96PW8 444 aa12.47□□□□□ -0.41
SGCA-202ENST00000344627 LRRC61Q9BV99 259 aa12.47□□□□□ -0.41
SGCA-202ENST00000344627 KLQ9UEF7 1012 aa12.47□□□□□ -0.41
SGCA-202ENST00000344627 MOSPD1Q9UJG1 213 aa12.47□□□□□ -0.41
SGCA-202ENST00000344627 PCDHGC4Q9Y5F7 938 aa12.47□□□□□ -0.41
SGCA-202ENST00000344627 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.47□□□□□ -0.41
SGCA-202ENST00000344627 GOLGA6CA6NDK9 693 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 GOLGA6BA6NDN3 693 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 J3QKU1 62 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 CACNB4O00305 520 aaPredicted RBP12.46□□□□□ -0.41
SGCA-202ENST00000344627 PDE2AO00408 941 aaPredicted RBP12.46□□□□□ -0.41
SGCA-202ENST00000344627 RECQL5O94762 991 aaPredicted RBP12.46□□□□□ -0.41
SGCA-202ENST00000344627 TNFP01375 233 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 CYP1A2P05177 515 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 GOLGA6DP0CG33 693 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 SFTPCP11686 197 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 PLA2G2AP14555 144 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 CASP14P31944 242 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 CCKBRP32239 447 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 SERPINB6P35237 376 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 SRP54P61011 504 aaKnown RBP12.46□□□□□ -0.41
SGCA-202ENST00000344627 AP1S1P61966 158 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 MTM1Q13496 603 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 NFATC4Q14934 902 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 TSR1Q2NL82 804 aaKnown RBP12.46□□□□□ -0.41
SGCA-202ENST00000344627 ALG11Q2TAA5 492 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 ZSCAN23Q3MJ62 389 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 TXNRD3NBQ6F5E7 133 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 CCDC81Q6ZN84 652 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 SLC35F3Q8IY50 421 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 ZNF564Q8TBZ8 553 aaPredicted RBP12.46□□□□□ -0.41
SGCA-202ENST00000344627 TEKT4Q8WW24 435 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 WDR92Q96MX6 357 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 ZNF599Q96NL3 588 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 PSKH2Q96QS6 385 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 CCDC3Q9BQI4 270 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 CLPBQ9H078 707 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 DEF6Q9H4E7 631 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 PCDH18Q9HCL0 1135 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 GOLGA6AQ9NYA3 693 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 CTTNBP2NLQ9P2B4 639 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 PNMA8BQ9ULN7 279 aaPredicted RBP12.46□□□□□ -0.41
SGCA-202ENST00000344627 DGKBQ9Y6T7 804 aa12.46□□□□□ -0.41
SGCA-202ENST00000344627 TNFRSF10CO14798 259 aa12.45□□□□□ -0.42
SGCA-202ENST00000344627 PLD2O14939 933 aa12.45□□□□□ -0.42
SGCA-202ENST00000344627 MAFKO60675 156 aa12.45□□□□□ -0.42
SGCA-202ENST00000344627 CPP00450 1065 aa12.45□□□□□ -0.42
SGCA-202ENST00000344627 GYPCP04921 128 aa12.45□□□□□ -0.42
SGCA-202ENST00000344627 CELA2BP08218 269 aaPredicted RBP12.45□□□□□ -0.42
SGCA-202ENST00000344627 HSPA9P38646 679 aaKnown RBP12.45□□□□□ -0.42
SGCA-202ENST00000344627 MAXP61244 160 aa12.45□□□□□ -0.42
SGCA-202ENST00000344627 SLC25A11Q02978 314 aaKnown RBP12.45□□□□□ -0.42
SGCA-202ENST00000344627 MMRN1Q13201 1228 aa12.45□□□□□ -0.42
SGCA-202ENST00000344627 KIF26BQ2KJY2 2108 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms