RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 NUDT18Q6ZVK8 323 aa13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 CHST9Q7L1S5 443 aa13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 GLRX5Q86SX6 157 aa13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 EXOC3L1Q86VI1 746 aa13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 NAXDQ8IW45 347 aa13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 NSMCE1Q8WV22 266 aa13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 CENPTQ96BT3 561 aa13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 HMCESQ96FZ2 354 aa13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 HSPA12BQ96MM6 686 aa13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 MLPHQ9BV36 600 aaPredicted RBP13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 CCDC86Q9H6F5 360 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 GLOD4Q9HC38 313 aa13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 CASS4Q9NQ75 786 aa13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 SPHK2Q9NRA0 654 aa13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 SUSD2Q9UGT4 822 aa13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 CYP8B1Q9UNU6 501 aa13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 PCDHB9Q9Y5E1 797 aa13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 MAD1L1Q9Y6D9 718 aa13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 LOC400499M0QZD8 3231 aa13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 GOLGA6L7A0A1B0GV03 622 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 TRIM24O15164 1050 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 CBFA2T3O75081 653 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 HLA-DQB2P05538 268 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 PGAM1P18669 254 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 OR1E1P30953 314 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 SLC6A4P31645 630 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 GRIA1P42261 906 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 MSH2P43246 934 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 RENBPP51606 427 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 NAB1Q13506 487 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 POLD3Q15054 466 aaPredicted RBP13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 EGFLAMQ63HQ2 1017 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 ZNF449Q6P9G9 518 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 UNC5AQ6ZN44 842 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 CYS1Q717R9 158 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 TRABD2AQ86V40 505 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 DENND1CQ8IV53 801 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 BBS7Q8IWZ6 715 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 MPP5Q8N3R9 675 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 CNTD1Q8N815 330 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 SLC44A1Q8WWI5 657 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 GABRG3Q99928 467 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 MAGEH1Q9H213 219 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 HAUS2Q9NVX0 235 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 SAMD15Q9P1V8 674 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 TBK1Q9UHD2 729 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 STOML2Q9UJZ1 356 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 SH3BP1Q9Y3L3 701 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 IKBKGQ9Y6K9 419 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 ZNF106Q9H2Y7 1883 aaKnown RBP13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 SCN8AQ9UQD0 1980 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 IGSF10Q6WRI0 2623 aa13.6□□□□□ -0.23
HERPUD1-202ENST00000344114 A0A1B0GVM2 712 aa13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 TCAF2A6NFQ2 919 aa13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 CLDN11O75508 207 aa13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 IRF1P10914 325 aa13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 MGAT1P26572 445 aa13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 WASP42768 502 aa13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 NPY2RP49146 381 aa13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 CDH17Q12864 832 aa13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 MPP3Q13368 585 aa13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 SERINC3Q13530 473 aa13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 EFTUD2Q15029 972 aaKnown RBP eCLIP13.59□□□□□ -0.238e-9■■■■□ 19.7
HERPUD1-202ENST00000344114 PLEKHG6Q3KR16 790 aa13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 KBTBD12Q3ZCT8 623 aa13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 ADGRF1Q5T601 910 aa13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 ARMC3Q5W041 872 aa13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 LEKR1Q6ZMV7 388 aa13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 CIR1Q86X95 450 aaPredicted RBP13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 TMEM25Q86YD3 366 aa13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 CCDC117Q8IWD4 279 aaPredicted RBP13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 CYP4X1Q8N118 509 aa13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 PNPLA1Q8N8W4 532 aa13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 OR52K1Q8NGK4 314 aa13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 DCAKDQ8WVC6 231 aa13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 WBP2Q969T9 261 aa13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 PRICKLE1Q96MT3 831 aaPredicted RBP13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 ZNF599Q96NL3 588 aa13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 ACOX2Q99424 681 aa13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 ZDHHC5Q9C0B5 715 aa13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 CD93Q9NPY3 652 aa13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 RBM22Q9NW64 420 aaKnown RBP eCLIP13.59□□□□□ -0.236e-8■■■■■ 33.4
HERPUD1-202ENST00000344114 SYBUQ9NX95 663 aa13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 BFARQ9NZS9 450 aa13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 KIAA1522Q9P206 1035 aaPredicted RBP13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 ZNF180Q9UJW8 692 aa13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 APOBEC2Q9Y235 224 aaKnown RBP13.59□□□□□ -0.23
HERPUD1-202ENST00000344114 IQANK1A0A1B0GTG1 560 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 FAM159BA6NKW6 160 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 PEX11BO96011 259 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 C1QAP02745 245 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 INHBAP08476 426 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 CHN1P15882 459 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 KRT15P19012 456 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 LSP1P33241 339 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 SESN2P58004 480 aaPredicted RBP13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 GUCY1A3Q02108 690 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 GRIK2Q13002 908 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 FRG1Q14331 258 aaKnown RBP13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 SPANXN3Q5MJ09 141 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms