RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 NFATC4Q14934 902 aa13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 SLC9A4Q6AI14 798 aa13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 BZW1Q7L1Q6 419 aaKnown RBP13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 CPNE8Q86YQ8 564 aa13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 RAVER1Q8IY67 606 aaKnown RBP13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 CCDC13Q8IYE1 715 aa13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 PHACTR4Q8IZ21 702 aa13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 FSTL5Q8N475 847 aaPredicted RBP13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 TPCN2Q8NHX9 752 aa13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 PDCD6IPQ8WUM4 868 aaKnown RBP13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 RAPGEF5Q92565 580 aa13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 GLMNQ92990 594 aa13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 TRIM44Q96DX7 344 aaPredicted RBP13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 SCRN2Q96FV2 425 aa13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 MCCC1Q96RQ3 725 aaPredicted RBP13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 SEMA3CQ99985 751 aa13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 APOOQ9BUR5 198 aa13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 RBM22Q9NW64 420 aaKnown RBP eCLIP13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 B4GALT6Q9UBX8 382 aa13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 RPL26L1Q9UNX3 145 aaKnown RBP13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 COQ6Q9Y2Z9 468 aa13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 PPIL1Q9Y3C6 166 aa13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 SHROOM3Q8TF72 1996 aa13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 ARID1BQ8NFD5 2236 aaPredicted RBP13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 C3orf70A6NLC5 250 aaPredicted RBP13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 LMO7DNF2Z398 122 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 K7ESM1 405 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 CACNB4O00305 520 aaPredicted RBP13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 PDE2AO00408 941 aaPredicted RBP13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 APOL1O14791 398 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 PPP1R12AO14974 1030 aaPredicted RBP13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 RASGRP1O95267 797 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 KRT1P04264 644 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 ALPIP09923 528 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 RPIAP49247 311 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 KIAA1024LP59773 190 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 GBE1Q04446 702 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 ITKQ08881 620 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 TRAF2Q12933 501 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 ARHGEF7Q14155 803 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 PDK1Q15118 436 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 ELOCQ15369 112 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 CCDC157Q569K6 752 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 ZNF542PQ5EBM4 170 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 TPRG1LQ5T0D9 272 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 FAXCQ5TGI0 409 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 ESRP1Q6NXG1 681 aaKnown RBP13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 LVRNQ6Q4G3 990 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 TMTC1Q8IUR5 882 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 CCNYQ8ND76 341 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 SCG3Q8WXD2 468 aaKnown RBP13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 ZCCHC14Q8WYQ9 949 aaKnown RBP13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 APOLD1Q96LR9 279 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 COQ10AQ96MF6 247 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 WDR92Q96MX6 357 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 IL12RB2Q99665 862 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 DKK4Q9UBT3 224 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 KLF15Q9UIH9 416 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 RAI2Q9Y5P3 530 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 DGKBQ9Y6T7 804 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 LRRK1Q38SD2 2015 aa13.37□□□□□ -0.27
SIRPB3P-201ENST00000340424 TNFRSF10CO14798 259 aa13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 FZD6O60353 706 aa13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 HEXIM1O94992 359 aaKnown RBP13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 PRKCGP05129 697 aa13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 PCCBP05166 539 aa13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 TSHRP16473 764 aa13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 ZNF30P17039 623 aa13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 COMTP21964 271 aa13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 FECHP22830 423 aa13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 TEAD1P28347 426 aa13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 TRIM23P36406 574 aa13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 NOP2P46087 812 aaKnown RBP13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 NR2C2P49116 596 aa13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 HK3P52790 923 aa13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 IFI35P80217 286 aaPredicted RBP13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 TFDP2Q14188 446 aa13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 ACOX1Q15067 660 aa13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 CNGA3Q16281 694 aa13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 PRRT3Q5FWE3 981 aa13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 C11orf63Q6NUN7 778 aa13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 PLD5Q8N7P1 536 aa13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 LMX1AQ8TE12 382 aa13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 PIH1D2Q8WWB5 315 aa13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 NUS1Q96E22 293 aa13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 NSMCE3Q96MG7 304 aa13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 LRRC61Q9BV99 259 aa13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 TDRD1Q9BXT4 1180 aaKnown RBP13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 RBSNQ9H1K0 784 aa13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 CCDC86Q9H6F5 360 aaKnown RBP13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 WDR26Q9H7D7 661 aa13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 KLQ9UEF7 1012 aa13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 ZMIZ1Q9ULJ6 1067 aa13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 TTLL3Q9Y4R7 772 aa13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 PCDHA13Q9Y5I0 950 aa13.36□□□□□ -0.27
SIRPB3P-201ENST00000340424 IGF2RP11717 2491 aa13.35□□□□□ -0.27
SIRPB3P-201ENST00000340424 TTC24A2A3L6 582 aaPredicted RBP13.35□□□□□ -0.27
SIRPB3P-201ENST00000340424 PYGLP06737 847 aa13.35□□□□□ -0.27
SIRPB3P-201ENST00000340424 ANXA6P08133 673 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms