RNA–Protein interactions for RNA: ENST00000340160.7

TSPAN18-201, Transcript of tetraspanin 18, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN18, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN18-201ENST00000340160 HDAC11Q96DB2 347 aa9.71□□□□□ -0.85
TSPAN18-201ENST00000340160 SPATA16Q9BXB7 569 aa9.71□□□□□ -0.85
TSPAN18-201ENST00000340160 POMKQ9H5K3 350 aa9.71□□□□□ -0.85
TSPAN18-201ENST00000340160 C10orf88Q9H8K7 445 aa9.71□□□□□ -0.85
TSPAN18-201ENST00000340160 NDE1Q9NXR1 346 aa9.71□□□□□ -0.85
TSPAN18-201ENST00000340160 APPL1Q9UKG1 709 aa9.71□□□□□ -0.85
TSPAN18-201ENST00000340160 C1orf232A0A0U1RR37 186 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 KDELR3O43731 214 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 SNAP91O60641 907 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 ECI2O75521 394 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 NDST3O95803 873 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 MSH3P20585 1137 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 PSMD7P51665 324 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 ZNF33AQ06730 810 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 LMAN2Q12907 356 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 KRT72Q14CN4 511 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 TRMT5Q32P41 509 aaKnown RBP9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 UGT3A1Q6NUS8 523 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 CD300LGQ6UXG3 332 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 C3orf62Q6ZUJ4 267 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 TRIM48Q8IWZ4 208 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 ZNF276Q8N554 614 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 ELSPBP1Q96BH3 223 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 ASB16Q96NS5 453 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 VN1R3Q9BXE9 311 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 IL22Q9GZX6 179 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 A8MX80 341 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 HHLA1C9JL84 531 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 MAGEC1O60732 1142 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 HIST1H2AGP0C0S8 130 aaPredicted RBP9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 TPH1P17752 444 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 TFE3P19532 575 aaPredicted RBP9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 CHRM3P20309 590 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 HIST1H2ADP20671 130 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 MAP4P27816 1152 aaKnown RBP9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 RPL22P35268 128 aaKnown RBP9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 SERPINB9P50453 376 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 PDAP1Q13442 181 aaKnown RBP9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 TMED1Q13445 227 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 MTM1Q13496 603 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 PAFAH1B3Q15102 231 aaKnown RBP9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 ALFQ53S48 1182 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 RALGPS1Q5JS13 557 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 MARK2Q7KZI7 788 aaKnown RBP9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 UMODL1-AS1Q8N2C9 162 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 GATA6Q92908 595 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 HIST1H2AHQ96KK5 128 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 HIST1H2AJQ99878 128 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 H2AFJQ9BTM1 129 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 PHACTR1Q9C0D0 580 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 LATS2Q9NRM7 1088 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 CHKBQ9Y259 395 aa9.71□□□□□ -0.86
TSPAN18-201ENST00000340160 KLF8O95600 359 aaPredicted RBP9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 ASGR2P07307 311 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 TYK2P29597 1187 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 ACVRL1P37023 503 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 GPR1P46091 355 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 SMAD1Q15797 465 aaKnown RBP9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 LIN52Q52LA3 116 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 USP39Q53GS9 565 aaKnown RBP9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 LIMS2Q7Z4I7 341 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 HDDC3Q8N4P3 179 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 CENPIQ92674 756 aaPredicted RBP9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 SH3KBP1Q96B97 665 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 TRIM56Q9BRZ2 755 aaKnown RBP9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 FEM1AQ9BSK4 669 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 TRABDQ9H4I3 376 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 EVA1BQ9NVM1 165 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 SPATA6Q9NWH7 488 aaPredicted RBP9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 TBK1Q9UHD2 729 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 SLC24A2Q9UI40 661 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 ARHGAP10A1A4S6 786 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 HGSO14964 777 aaPredicted RBP9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 USP12O75317 370 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 SRPRAP08240 638 aaKnown RBP9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 TPP2P29144 1249 aaPredicted RBP9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 NTSR1P30989 418 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 PPIDQ08752 370 aaKnown RBP9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 CYLC2Q14093 348 aaPredicted RBP9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 PON2Q15165 354 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 RASA2Q15283 850 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 ZDHHC20Q5W0Z9 365 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 TERB1Q8NA31 727 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 IGSF8Q969P0 613 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 UTP4Q969X6 686 aaKnown RBP9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 LRRC39Q96DD0 335 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 KLHL32Q96NJ5 620 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 VPS11Q9H270 941 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 GPAMQ9HCL2 828 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 GTSE1Q9NYZ3 720 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 VPS51Q9UID3 782 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 FBXO10Q9UK96 956 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 SORCS3Q9UPU3 1222 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 SNX2O60749 519 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 CTSEP14091 401 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 ARSAP15289 507 aa9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 ZNF7P17097 686 aaPredicted RBP9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 LPOP22079 712 aaPredicted RBP9.7□□□□□ -0.86
TSPAN18-201ENST00000340160 DNAJB1P25685 340 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms