RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 RENBPP51606 427 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 MPPE1Q53F39 396 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 RERGQ96A58 199 aaPredicted RBP12.87□□□□□ -0.35
USP47-202ENST00000339865 GIN1Q9NXP7 522 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 ZC3H11AO75152 810 aaKnown RBP eCLIP12.87□□□□□ -0.357e-6■■■■■ 33.7
USP47-202ENST00000339865 MED24O75448 989 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 SERPINB7O75635 380 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 THPOP40225 353 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 RPL21P46778 160 aaKnown RBP12.87□□□□□ -0.35
USP47-202ENST00000339865 SNAPC1Q16533 368 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 TDRPQ86YL5 185 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 OR52K1Q8NGK4 314 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 SLC5A5Q92911 643 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 OR52E6Q96RD3 313 aa12.87□□□□□ -0.35
USP47-202ENST00000339865 USB1Q9BQ65 265 aaKnown RBP12.87□□□□□ -0.35
USP47-202ENST00000339865 RPS6KA4O75676 772 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 PRKD3O94806 890 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 F9P00740 461 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 PGRP06401 933 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 COX4I1P13073 169 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 NOS2P35228 1153 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 PPP3R1P63098 170 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 ERVK-24P63145 666 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 FAM43BQ6ZT52 329 aaPredicted RBP12.86□□□□□ -0.35
USP47-202ENST00000339865 OR4A15Q8NGL6 344 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 POP1Q99575 1024 aaKnown RBP12.86□□□□□ -0.35
USP47-202ENST00000339865 RIT2Q99578 217 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 TLR8Q9NR97 1041 aaKnown RBP12.86□□□□□ -0.35
USP47-202ENST00000339865 NAGLUP54802 743 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 INSCQ1MX18 579 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 HECTD3Q5T447 861 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 PNPT1Q8TCS8 783 aaKnown RBP12.86□□□□□ -0.35
USP47-202ENST00000339865 AASDHPPTQ9NRN7 309 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 ZNF69Q9UC07 566 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 PLK4O00444 970 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 ALDH4A1P30038 563 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 GRIA4P48058 902 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 NFIAQ12857 509 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 BATFQ16520 125 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 GPR139Q6DWJ6 353 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 TCEAL6Q6IPX3 200 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 SPOCD1Q6ZMY3 1216 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 JAZF1Q86VZ6 243 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 ZNF398Q8TD17 642 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 SNX33Q8WV41 574 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 EDEM1Q92611 657 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 CLDN25C9JDP6 229 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 SSX4O60224 188 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 UNC5CO95185 931 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 GSTT2BP0CG30 244 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 PGAM1P18669 254 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 AQP1P29972 269 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 MAPK12P53778 367 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 ABRQ12979 859 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 FAM153CQ494X1 144 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 RDH8Q9NYR8 311 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 RIMKLBQ9ULI2 386 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 SUV39H1O43463 412 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 RAMP2O60895 175 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 VNN2O95498 520 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 CYB5AP00167 134 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 CREB5Q02930 508 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 BRMS1LQ5PSV4 323 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 C12orf43Q96C57 262 aaKnown RBP12.86□□□□□ -0.35
USP47-202ENST00000339865 TMEM68Q96MH6 324 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 BCKDKO14874 412 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 DRG2P55039 364 aaKnown RBP12.86□□□□□ -0.35
USP47-202ENST00000339865 MANFP55145 182 aaKnown RBP12.86□□□□□ -0.35
USP47-202ENST00000339865 CFAP206Q8IYR0 622 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 TMIEQ8NEW7 156 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 EQTNQ9NQ60 294 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 FABP12A6NFH5 140 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 TOR1BO14657 336 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 AURKAO14965 403 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 AMIGO1Q86WK6 493 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 C11orf65Q8NCR3 313 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 HM13Q8TCT9 377 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 CLPTM1LQ96KA5 538 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 AGPAT3Q9NRZ7 376 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 BLOC1S4Q9NUP1 217 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 PARPBPQ9NWS1 579 aa12.86□□□□□ -0.35
USP47-202ENST00000339865 MATN2O00339 956 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 TBX1O43435 398 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 TRMUO75648 421 aaKnown RBP12.85□□□□□ -0.35
USP47-202ENST00000339865 SPARCP09486 303 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 CCNHP51946 323 aaPredicted RBP12.85□□□□□ -0.35
USP47-202ENST00000339865 VLDLRP98155 873 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 HSPA14Q0VDF9 509 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 CYP2A13Q16696 494 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 DNAAF5Q86Y56 855 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 EHD4Q9H223 541 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 PEG3Q9GZU2 1588 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 DCDC1P59894 354 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 ILF3Q12906 894 aaKnown RBP eCLIP12.85□□□□□ -0.357e-8■■■□□ 14.9
USP47-202ENST00000339865 MTFR2Q6P444 385 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 THRSPQ92748 146 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 ERGIC2Q96RQ1 377 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 TBL1YQ9BQ87 522 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 TBC1D17Q9HA65 648 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 KCNK1O00180 336 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms