RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 NUMBP49757 651 aa16.28■□□□□ 0.2
HPS1-202ENST00000338546 VASPP50552 380 aaPredicted RBP16.28■□□□□ 0.2
HPS1-202ENST00000338546 STC1P52823 247 aa16.28■□□□□ 0.2
HPS1-202ENST00000338546 IRF9Q00978 393 aa16.28■□□□□ 0.2
HPS1-202ENST00000338546 FAM83EQ2M2I3 478 aa16.28■□□□□ 0.2
HPS1-202ENST00000338546 HECTD2Q5U5R9 776 aa16.28■□□□□ 0.2
HPS1-202ENST00000338546 AGAP9Q5VTM2 703 aa16.28■□□□□ 0.2
HPS1-202ENST00000338546 KIAA0907Q7Z7F0 614 aaPredicted RBP16.28■□□□□ 0.2
HPS1-202ENST00000338546 TMEM25Q86YD3 366 aa16.28■□□□□ 0.2
HPS1-202ENST00000338546 RNF135Q8IUD6 432 aa16.28■□□□□ 0.2
HPS1-202ENST00000338546 CEP97Q8IW35 865 aa16.28■□□□□ 0.2
HPS1-202ENST00000338546 CENPLQ8N0S6 344 aaPredicted RBP16.28■□□□□ 0.2
HPS1-202ENST00000338546 TTC30BQ8N4P2 665 aa16.28■□□□□ 0.2
HPS1-202ENST00000338546 FITM2Q8N6M3 262 aa16.28■□□□□ 0.2
HPS1-202ENST00000338546 CELF5Q8N6W0 485 aaKnown RBP16.28■□□□□ 0.2
HPS1-202ENST00000338546 OR4K2Q8NGD2 314 aa16.28■□□□□ 0.2
HPS1-202ENST00000338546 OR2AP1Q8NGE2 309 aa16.28■□□□□ 0.2
HPS1-202ENST00000338546 OR13C4Q8NGS5 318 aa16.28■□□□□ 0.2
HPS1-202ENST00000338546 PPP4R1Q8TF05 950 aa16.28■□□□□ 0.2
HPS1-202ENST00000338546 BHMTQ93088 406 aa16.28■□□□□ 0.2
HPS1-202ENST00000338546 MYO19Q96H55 970 aa16.28■□□□□ 0.2
HPS1-202ENST00000338546 GPR78Q96P69 363 aa16.28■□□□□ 0.2
HPS1-202ENST00000338546 CDCA3Q99618 268 aaPredicted RBP16.28■□□□□ 0.2
HPS1-202ENST00000338546 MRPL57Q9BQC6 102 aaKnown RBP16.28■□□□□ 0.2
HPS1-202ENST00000338546 STN1Q9H668 368 aaKnown RBP16.28■□□□□ 0.2
HPS1-202ENST00000338546 ZNF358Q9NW07 568 aa16.28■□□□□ 0.2
HPS1-202ENST00000338546 OXSMQ9NWU1 459 aa16.28■□□□□ 0.2
HPS1-202ENST00000338546 PLK2Q9NYY3 685 aa16.28■□□□□ 0.2
HPS1-202ENST00000338546 SLC25A13Q9UJS0 675 aa16.28■□□□□ 0.2
HPS1-202ENST00000338546 MRPS23Q9Y3D9 190 aaKnown RBP16.28■□□□□ 0.2
HPS1-202ENST00000338546 MYO1CO00159 1063 aa16.27■□□□□ 0.2
HPS1-202ENST00000338546 TRAFD1O14545 582 aaPredicted RBP16.27■□□□□ 0.2
HPS1-202ENST00000338546 STX7O15400 261 aaKnown RBP16.27■□□□□ 0.2
HPS1-202ENST00000338546 SMAD6O43541 496 aaKnown RBP16.27■□□□□ 0.2
HPS1-202ENST00000338546 DNAJC6O75061 913 aa16.27■□□□□ 0.2
HPS1-202ENST00000338546 ZNF821O75541 412 aaPredicted RBP16.27■□□□□ 0.2
HPS1-202ENST00000338546 WISP3O95389 354 aaPredicted RBP16.27■□□□□ 0.2
HPS1-202ENST00000338546 SAT1P21673 171 aa16.27■□□□□ 0.2
HPS1-202ENST00000338546 CD9P21926 228 aa16.27■□□□□ 0.2
HPS1-202ENST00000338546 PMLP29590 882 aa16.27■□□□□ 0.2
HPS1-202ENST00000338546 HMGCLP35914 325 aa16.27■□□□□ 0.2
HPS1-202ENST00000338546 SCTRP47872 440 aa16.27■□□□□ 0.2
HPS1-202ENST00000338546 SLC1A6P48664 564 aa16.27■□□□□ 0.2
HPS1-202ENST00000338546 SUOXP51687 545 aa16.27■□□□□ 0.2
HPS1-202ENST00000338546 EPHB1P54762 984 aa16.27■□□□□ 0.2
HPS1-202ENST00000338546 IRX4P78413 519 aa16.27■□□□□ 0.2
HPS1-202ENST00000338546 BNIP1Q12981 228 aa16.27■□□□□ 0.2
HPS1-202ENST00000338546 DUSP6Q16828 381 aa16.27■□□□□ 0.2
HPS1-202ENST00000338546 AARS2Q5JTZ9 985 aaKnown RBP16.27■□□□□ 0.2
HPS1-202ENST00000338546 C9orf50Q5SZB4 431 aa16.27■□□□□ 0.2
HPS1-202ENST00000338546 SPRED2Q7Z698 418 aa16.27■□□□□ 0.2
HPS1-202ENST00000338546 ADGRG2Q8IZP9 1017 aa16.27■□□□□ 0.2
HPS1-202ENST00000338546 TMEM151AQ8N4L1 468 aa16.27■□□□□ 0.2
HPS1-202ENST00000338546 PCDH20Q8N6Y1 951 aaKnown RBP16.27■□□□□ 0.2
HPS1-202ENST00000338546 PIH1D2Q8WWB5 315 aa16.27■□□□□ 0.2
HPS1-202ENST00000338546 UBXN10Q96LJ8 280 aa16.27■□□□□ 0.2
HPS1-202ENST00000338546 BBS2Q9BXC9 721 aa16.27■□□□□ 0.2
HPS1-202ENST00000338546 CPEB1Q9BZB8 566 aaKnown RBP16.27■□□□□ 0.2
HPS1-202ENST00000338546 MRPL46Q9H2W6 279 aaKnown RBP16.27■□□□□ 0.2
HPS1-202ENST00000338546 KCNK13Q9HB14 408 aa16.27■□□□□ 0.2
HPS1-202ENST00000338546 PIDD1Q9HB75 910 aa16.27■□□□□ 0.2
HPS1-202ENST00000338546 MARCH4Q9P2E8 410 aaPredicted RBP16.27■□□□□ 0.2
HPS1-202ENST00000338546 PCDHB9Q9Y5E1 797 aa16.27■□□□□ 0.2
HPS1-202ENST00000338546 MKI67P46013 3256 aaKnown RBP16.27■□□□□ 0.19
HPS1-202ENST00000338546 GRXCR1A8MXD5 290 aa16.26■□□□□ 0.19
HPS1-202ENST00000338546 TARM1B6A8C7 271 aa16.26■□□□□ 0.19
HPS1-202ENST00000338546 K7ERQ8 282 aa16.26■□□□□ 0.19
HPS1-202ENST00000338546 AURKAO14965 403 aa16.26■□□□□ 0.19
HPS1-202ENST00000338546 CSPG5O95196 566 aa16.26■□□□□ 0.19
HPS1-202ENST00000338546 PRAMEF12O95522 483 aa16.26■□□□□ 0.19
HPS1-202ENST00000338546 F7P08709 466 aaPredicted RBP16.26■□□□□ 0.19
HPS1-202ENST00000338546 RBP1P09455 135 aa16.26■□□□□ 0.19
HPS1-202ENST00000338546 PIRTP0C851 137 aa16.26■□□□□ 0.19
HPS1-202ENST00000338546 PABPC1P11940 636 aaKnown RBP16.26■□□□□ 0.19
HPS1-202ENST00000338546 SRCP12931 536 aa16.26■□□□□ 0.19
HPS1-202ENST00000338546 SERPINA4P29622 427 aa16.26■□□□□ 0.19
HPS1-202ENST00000338546 ABCE1P61221 599 aaKnown RBP16.26■□□□□ 0.19
HPS1-202ENST00000338546 SF3A3Q12874 501 aaKnown RBP eCLIP16.26■□□□□ 0.195e-6■■■■□ 19.6
HPS1-202ENST00000338546 OVGP1Q12889 678 aa16.26■□□□□ 0.19
HPS1-202ENST00000338546 ZNF789Q5FWF6 425 aa16.26■□□□□ 0.19
HPS1-202ENST00000338546 ATXN7L2Q5T6C5 722 aaPredicted RBP16.26■□□□□ 0.19
HPS1-202ENST00000338546 LRRC8EQ6NSJ5 796 aa16.26■□□□□ 0.19
HPS1-202ENST00000338546 KLC3Q6P597 504 aa16.26■□□□□ 0.19
HPS1-202ENST00000338546 ARID3BQ8IVW6 561 aaPredicted RBP16.26■□□□□ 0.19
HPS1-202ENST00000338546 WDR75Q8IWA0 830 aaKnown RBP16.26■□□□□ 0.19
HPS1-202ENST00000338546 RIN3Q8TB24 985 aa16.26■□□□□ 0.19
HPS1-202ENST00000338546 PIWIL2Q8TC59 973 aaKnown RBP16.26■□□□□ 0.19
HPS1-202ENST00000338546 PDCD6IPQ8WUM4 868 aaKnown RBP16.26■□□□□ 0.19
HPS1-202ENST00000338546 SMG7Q92540 1137 aaKnown RBP16.26■□□□□ 0.19
HPS1-202ENST00000338546 CCDC126Q96EE4 140 aa16.26■□□□□ 0.19
HPS1-202ENST00000338546 TUBB6Q9BUF5 446 aa16.26■□□□□ 0.19
HPS1-202ENST00000338546 SUDS3Q9H7L9 328 aaPredicted RBP16.26■□□□□ 0.19
HPS1-202ENST00000338546 TLE6Q9H808 572 aa16.26■□□□□ 0.19
HPS1-202ENST00000338546 DZANK1Q9NVP4 752 aa16.26■□□□□ 0.19
HPS1-202ENST00000338546 COMMD10Q9Y6G5 202 aa16.26■□□□□ 0.19
HPS1-202ENST00000338546 PER2O15055 1255 aa16.26■□□□□ 0.19
HPS1-202ENST00000338546 DNAJC8O75937 253 aaPredicted RBP16.26■□□□□ 0.19
HPS1-202ENST00000338546 UBOX5O94941 541 aa16.26■□□□□ 0.19
HPS1-202ENST00000338546 LTA4HP09960 611 aaKnown RBP16.26■□□□□ 0.19
HPS1-202ENST00000338546 TYRP14679 529 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms