RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 LRRC57Q8N9N7 239 aa15.32■□□□□ 0.04
PRKN-201ENST00000338468 MCCC1Q96RQ3 725 aaPredicted RBP15.32■□□□□ 0.04
PRKN-201ENST00000338468 DESI2Q9BSY9 194 aa15.32■□□□□ 0.04
PRKN-201ENST00000338468 C1QTNF7Q9BXJ2 289 aa15.32■□□□□ 0.04
PRKN-201ENST00000338468 SAE1Q9UBE0 346 aaPredicted RBP15.32■□□□□ 0.04
PRKN-201ENST00000338468 TRIM10Q9UDY6 481 aa15.32■□□□□ 0.04
PRKN-201ENST00000338468 PHTF1Q9UMS5 762 aa15.32■□□□□ 0.04
PRKN-201ENST00000338468 PPIL1Q9Y3C6 166 aa15.32■□□□□ 0.04
PRKN-201ENST00000338468 hCG_1818297A0A087WSY0 165 aa15.31■□□□□ 0.04
PRKN-201ENST00000338468 A0A0U1RQS6 177 aa15.31■□□□□ 0.04
PRKN-201ENST00000338468 A0A1W2PQ67 120 aa15.31■□□□□ 0.04
PRKN-201ENST00000338468 GRID2IPA4D2P6 1211 aa15.31■□□□□ 0.04
PRKN-201ENST00000338468 NPIPB15A6NHN6 443 aaPredicted RBP15.31■□□□□ 0.04
PRKN-201ENST00000338468 TRIM38O00635 465 aa15.31■□□□□ 0.04
PRKN-201ENST00000338468 LZTS3O60299 673 aaPredicted RBP15.31■□□□□ 0.04
PRKN-201ENST00000338468 CST8O60676 142 aa15.31■□□□□ 0.04
PRKN-201ENST00000338468 RECQL5O94762 991 aaPredicted RBP15.31■□□□□ 0.04
PRKN-201ENST00000338468 HEXIM1O94992 359 aaKnown RBP15.31■□□□□ 0.04
PRKN-201ENST00000338468 ZRANB2O95218 330 aaKnown RBP eCLIP15.31■□□□□ 0.04
PRKN-201ENST00000338468 IPO7O95373 1038 aaKnown RBP15.31■□□□□ 0.04
PRKN-201ENST00000338468 PRLP01236 227 aa15.31■□□□□ 0.04
PRKN-201ENST00000338468 CSF2P04141 144 aa15.31■□□□□ 0.04
PRKN-201ENST00000338468 NME1P15531 152 aaKnown RBP15.31■□□□□ 0.04
PRKN-201ENST00000338468 ZFXP17010 805 aaPredicted RBP15.31■□□□□ 0.04
PRKN-201ENST00000338468 VIPR1P32241 457 aa15.31■□□□□ 0.04
PRKN-201ENST00000338468 CTNNA1P35221 906 aaKnown RBP15.31■□□□□ 0.04
PRKN-201ENST00000338468 YPEL5P62699 121 aa15.31■□□□□ 0.04
PRKN-201ENST00000338468 PDK1Q15118 436 aa15.31■□□□□ 0.04
PRKN-201ENST00000338468 INAVAQ3KP66 663 aa15.31■□□□□ 0.04
PRKN-201ENST00000338468 ARMC12Q5T9G4 340 aa15.31■□□□□ 0.04
PRKN-201ENST00000338468 CCNI2Q6ZMN8 369 aaPredicted RBP15.31■□□□□ 0.04
PRKN-201ENST00000338468 NYAP1Q6ZVC0 841 aa15.31■□□□□ 0.04
PRKN-201ENST00000338468 TSPAN33Q86UF1 283 aa15.31■□□□□ 0.04
PRKN-201ENST00000338468 PARGQ86W56 976 aa15.31■□□□□ 0.04
PRKN-201ENST00000338468 PELI3Q8N2H9 469 aa15.31■□□□□ 0.04
PRKN-201ENST00000338468 PLA2G15Q8NCC3 412 aa15.31■□□□□ 0.04
PRKN-201ENST00000338468 EXD1Q8NHP7 514 aa15.31■□□□□ 0.04
PRKN-201ENST00000338468 SCRN2Q96FV2 425 aa15.31■□□□□ 0.04
PRKN-201ENST00000338468 COQ10AQ96MF6 247 aa15.31■□□□□ 0.04
PRKN-201ENST00000338468 ZNF830Q96NB3 372 aaPredicted RBP15.31■□□□□ 0.04
PRKN-201ENST00000338468 HERPUD2Q9BSE4 406 aa15.31■□□□□ 0.04
PRKN-201ENST00000338468 CEP41Q9BYV8 373 aa15.31■□□□□ 0.04
PRKN-201ENST00000338468 DNAJC28Q9NX36 388 aa15.31■□□□□ 0.04
PRKN-201ENST00000338468 FTSJ1Q9UET6 329 aa15.31■□□□□ 0.04
PRKN-201ENST00000338468 APOBEC2Q9Y235 224 aaKnown RBP15.31■□□□□ 0.04
PRKN-201ENST00000338468 PCDHA3Q9Y5H8 950 aa15.31■□□□□ 0.04
PRKN-201ENST00000338468 TDRD6O60522 2096 aaKnown RBP15.31■□□□□ 0.04
PRKN-201ENST00000338468 GOLGA8CPA6NN73 597 aa15.3■□□□□ 0.04
PRKN-201ENST00000338468 ALPIP09923 528 aa15.3■□□□□ 0.04
PRKN-201ENST00000338468 ELFN1P0C7U0 828 aa15.3■□□□□ 0.04
PRKN-201ENST00000338468 CTPS1P17812 591 aa15.3■□□□□ 0.04
PRKN-201ENST00000338468 CES1P23141 567 aa15.3■□□□□ 0.04
PRKN-201ENST00000338468 PEX5P50542 639 aa15.3■□□□□ 0.04
PRKN-201ENST00000338468 SKOR1P84550 965 aa15.3■□□□□ 0.04
PRKN-201ENST00000338468 AP1B1Q10567 949 aa15.3■□□□□ 0.04
PRKN-201ENST00000338468 DNAJC3Q13217 504 aa15.3■□□□□ 0.04
PRKN-201ENST00000338468 INPP5AQ14642 412 aa15.3■□□□□ 0.04
PRKN-201ENST00000338468 PRKD1Q15139 912 aaPredicted RBP15.3■□□□□ 0.04
PRKN-201ENST00000338468 ODF2Q5BJF6 829 aa15.3■□□□□ 0.04
PRKN-201ENST00000338468 TFDP3Q5H9I0 405 aa15.3■□□□□ 0.04
PRKN-201ENST00000338468 KAZNQ674X7 775 aa15.3■□□□□ 0.04
PRKN-201ENST00000338468 RCOR2Q8IZ40 523 aa15.3■□□□□ 0.04
PRKN-201ENST00000338468 PAF1Q8N7H5 531 aa15.3■□□□□ 0.04
PRKN-201ENST00000338468 FUBP1Q96AE4 644 aaKnown RBP15.3■□□□□ 0.04
PRKN-201ENST00000338468 CALR3Q96L12 384 aaKnown RBP15.3■□□□□ 0.04
PRKN-201ENST00000338468 ANP32EQ9BTT0 268 aa15.3■□□□□ 0.04
PRKN-201ENST00000338468 TDRD1Q9BXT4 1180 aaKnown RBP15.3■□□□□ 0.04
PRKN-201ENST00000338468 TCEAL2Q9H3H9 227 aaPredicted RBP15.3■□□□□ 0.04
PRKN-201ENST00000338468 CELSR3Q9NYQ7 3312 aa15.3■□□□□ 0.04
PRKN-201ENST00000338468 CHKBQ9Y259 395 aa15.3■□□□□ 0.04
PRKN-201ENST00000338468 TTLL3Q9Y4R7 772 aa15.3■□□□□ 0.04
PRKN-201ENST00000338468 OR1A2Q9Y585 309 aa15.3■□□□□ 0.04
PRKN-201ENST00000338468 ACACAQ13085 2346 aa15.29■□□□□ 0.04
PRKN-201ENST00000338468 EIF4E1BA6NMX2 242 aaKnown RBP15.29■□□□□ 0.04
PRKN-201ENST00000338468 TOR1BO14657 336 aa15.29■□□□□ 0.04
PRKN-201ENST00000338468 ENC1O14682 589 aa15.29■□□□□ 0.04
PRKN-201ENST00000338468 PPP1R12AO14974 1030 aaPredicted RBP15.29■□□□□ 0.04
PRKN-201ENST00000338468 SIGLEC6O43699 453 aa15.29■□□□□ 0.04
PRKN-201ENST00000338468 LDOC1O95751 146 aaPredicted RBP15.29■□□□□ 0.04
PRKN-201ENST00000338468 PCCBP05166 539 aa15.29■□□□□ 0.04
PRKN-201ENST00000338468 TGM2P21980 687 aa15.29■□□□□ 0.04
PRKN-201ENST00000338468 CTNNA2P26232 953 aa15.29■□□□□ 0.04
PRKN-201ENST00000338468 HNF1BP35680 557 aa15.29■□□□□ 0.04
PRKN-201ENST00000338468 MTM1Q13496 603 aa15.29■□□□□ 0.04
PRKN-201ENST00000338468 TFDP2Q14188 446 aa15.29■□□□□ 0.04
PRKN-201ENST00000338468 PPP2R5EQ16537 467 aa15.29■□□□□ 0.04
PRKN-201ENST00000338468 PROX2Q3B8N5 592 aa15.29■□□□□ 0.04
PRKN-201ENST00000338468 KCTD16Q68DU8 428 aa15.29■□□□□ 0.04
PRKN-201ENST00000338468 MACC1Q6ZN28 852 aa15.29■□□□□ 0.04
PRKN-201ENST00000338468 HSD11B1LQ7Z5J1 315 aa15.29■□□□□ 0.04
PRKN-201ENST00000338468 KIAA1328Q86T90 577 aa15.29■□□□□ 0.04
PRKN-201ENST00000338468 RBFAQ8N0V3 343 aa15.29■□□□□ 0.04
PRKN-201ENST00000338468 ZNF548Q8NEK5 533 aaPredicted RBP15.29■□□□□ 0.04
PRKN-201ENST00000338468 TADA1Q96BN2 335 aa15.29■□□□□ 0.04
PRKN-201ENST00000338468 CNDP2Q96KP4 475 aaKnown RBP15.29■□□□□ 0.04
PRKN-201ENST00000338468 APOOQ9BUR5 198 aa15.29■□□□□ 0.04
PRKN-201ENST00000338468 BRD8Q9H0E9 1235 aa15.29■□□□□ 0.04
PRKN-201ENST00000338468 APC2O95996 2303 aa15.29■□□□□ 0.04
PRKN-201ENST00000338468 SETXQ7Z333 2677 aaKnown RBP15.29■□□□□ 0.04
PRKN-201ENST00000338468 A0A0J9YYE9 177 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms