RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 ZNF641Q96N77 438 aaPredicted RBP14.74□□□□□ -0.05
CBX3-201ENST00000337620 KLHL32Q96NJ5 620 aa14.74□□□□□ -0.05
CBX3-201ENST00000337620 FAM167BQ9BTA0 163 aa14.74□□□□□ -0.05
CBX3-201ENST00000337620 MAGEE1Q9HCI5 957 aa14.74□□□□□ -0.05
CBX3-201ENST00000337620 NLE1Q9NVX2 485 aaPredicted RBP14.74□□□□□ -0.05
CBX3-201ENST00000337620 A8MX80 341 aa14.73□□□□□ -0.05
CBX3-201ENST00000337620 WASH3PC4AMC7 463 aa14.73□□□□□ -0.05
CBX3-201ENST00000337620 SLC7A4O43246 635 aa14.73□□□□□ -0.05
CBX3-201ENST00000337620 LEFTY1O75610 366 aa14.73□□□□□ -0.05
CBX3-201ENST00000337620 RPP40O75818 363 aaKnown RBP14.73□□□□□ -0.05
CBX3-201ENST00000337620 PYGBP11216 843 aa14.73□□□□□ -0.05
CBX3-201ENST00000337620 HLA-EP13747 358 aa14.73□□□□□ -0.05
CBX3-201ENST00000337620 HNF1BP35680 557 aa14.73□□□□□ -0.05
CBX3-201ENST00000337620 EIF2DP41214 584 aaKnown RBP14.73□□□□□ -0.05
CBX3-201ENST00000337620 ZNF140P52738 457 aaPredicted RBP14.73□□□□□ -0.05
CBX3-201ENST00000337620 MPP1Q00013 466 aa14.73□□□□□ -0.05
CBX3-201ENST00000337620 PDE1BQ01064 536 aa14.73□□□□□ -0.05
CBX3-201ENST00000337620 GUCY1A3Q02108 690 aa14.73□□□□□ -0.05
CBX3-201ENST00000337620 ACVR1Q04771 509 aa14.73□□□□□ -0.05
CBX3-201ENST00000337620 PREPLQ4J6C6 727 aaPredicted RBP14.73□□□□□ -0.05
CBX3-201ENST00000337620 CNTN4Q8IWV2 1026 aa14.73□□□□□ -0.05
CBX3-201ENST00000337620 ANKRD42Q8N9B4 389 aa14.73□□□□□ -0.05
CBX3-201ENST00000337620 CALML6Q8TD86 181 aa14.73□□□□□ -0.05
CBX3-201ENST00000337620 MGARPQ8TDB4 240 aa14.73□□□□□ -0.05
CBX3-201ENST00000337620 CDKN2AIPNLQ96HQ2 116 aa14.73□□□□□ -0.05
CBX3-201ENST00000337620 RBBP8Q99708 897 aa14.73□□□□□ -0.05
CBX3-201ENST00000337620 BPIFA1Q9NP55 256 aa14.73□□□□□ -0.05
CBX3-201ENST00000337620 RIMKLBQ9ULI2 386 aa14.73□□□□□ -0.05
CBX3-201ENST00000337620 PHTF1Q9UMS5 762 aa14.73□□□□□ -0.05
CBX3-201ENST00000337620 ZNF711Q9Y462 761 aa14.73□□□□□ -0.05
CBX3-201ENST00000337620 COL4A3Q01955 1670 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 CCDC162PA2VCL2 907 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 STX7O15400 261 aaKnown RBP14.72□□□□□ -0.05
CBX3-201ENST00000337620 MBTPS2O43462 519 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 AHSGP02765 367 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 APODP05090 189 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 CHN1P15882 459 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 GRIA2P42262 883 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 SLC1A2P43004 574 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 SMAD4Q13485 552 aaKnown RBP14.72□□□□□ -0.05
CBX3-201ENST00000337620 ZNF234Q14588 700 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 NUDT18Q6ZVK8 323 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 LYSMD3Q7Z3D4 306 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 TTC30BQ8N4P2 665 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 GABPB2Q8TAK5 448 aaPredicted RBP14.72□□□□□ -0.05
CBX3-201ENST00000337620 ECHDC3Q96DC8 303 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 CDX2Q99626 313 aaPredicted RBP14.72□□□□□ -0.05
CBX3-201ENST00000337620 CAPS2Q9BXY5 557 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 MFSD1Q9H3U5 465 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 FBRSL1Q9HCM7 1045 aaKnown RBP14.72□□□□□ -0.05
CBX3-201ENST00000337620 ZDHHC4Q9NPG8 344 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 LIMD1Q9UGP4 676 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 IL36AQ9UHA7 158 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 FNDC3AQ9Y2H6 1198 aaKnown RBP14.72□□□□□ -0.05
CBX3-201ENST00000337620 WASF2Q9Y6W5 498 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 C1orf232A0A0U1RR37 186 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 ANTXRLA6NF34 631 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 RFPL1O75677 317 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 GOT2P00505 430 aaKnown RBP14.72□□□□□ -0.05
CBX3-201ENST00000337620 LIMK2P53671 638 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 CSE1LP55060 971 aaKnown RBP14.72□□□□□ -0.05
CBX3-201ENST00000337620 SEMG2Q02383 582 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 MPP2Q14168 576 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 UGP2Q16851 508 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 FSTL4Q6MZW2 842 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 SERPINA13PQ6UXR4 307 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 NDUFAF2Q8N183 169 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 PNPLA1Q8N8W4 532 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 POLR3BQ9NW08 1133 aaPredicted RBP14.72□□□□□ -0.05
CBX3-201ENST00000337620 FBXO5Q9UKT4 447 aa14.72□□□□□ -0.05
CBX3-201ENST00000337620 MTO1Q9Y2Z2 717 aaKnown RBP14.72□□□□□ -0.05
CBX3-201ENST00000337620 KIAA1549LQ6ZVL6 1849 aa14.71□□□□□ -0.05
CBX3-201ENST00000337620 FAM47DPA6NHR8 397 aa14.71□□□□□ -0.05
CBX3-201ENST00000337620 SIN3BO75182 1162 aa14.71□□□□□ -0.05
CBX3-201ENST00000337620 CTSLP07711 333 aa14.71□□□□□ -0.05
CBX3-201ENST00000337620 GABRB3P28472 473 aa14.71□□□□□ -0.05
CBX3-201ENST00000337620 MDH1P40925 334 aaKnown RBP14.71□□□□□ -0.05
CBX3-201ENST00000337620 GALK1P51570 392 aa14.71□□□□□ -0.05
CBX3-201ENST00000337620 LRRC73Q5JTD7 316 aa14.71□□□□□ -0.05
CBX3-201ENST00000337620 LDB1Q86U70 411 aaPredicted RBP14.71□□□□□ -0.05
CBX3-201ENST00000337620 C2CD4AQ8NCU7 369 aaPredicted RBP14.71□□□□□ -0.05
CBX3-201ENST00000337620 OR4L1Q8NH43 312 aa14.71□□□□□ -0.05
CBX3-201ENST00000337620 ZFYVE1Q9HBF4 777 aa14.71□□□□□ -0.05
CBX3-201ENST00000337620 MLXIPLQ9NP71 852 aa14.71□□□□□ -0.05
CBX3-201ENST00000337620 FBXO6Q9NRD1 293 aaPredicted RBP14.71□□□□□ -0.05
CBX3-201ENST00000337620 NKIRAS1Q9NYS0 192 aa14.71□□□□□ -0.05
CBX3-201ENST00000337620 SMG5Q9UPR3 1016 aaKnown RBP14.71□□□□□ -0.05
CBX3-201ENST00000337620 PKP3Q9Y446 797 aa14.71□□□□□ -0.05
CBX3-201ENST00000337620 EDDM13A0A1B0GTR0 161 aa14.71□□□□□ -0.06
CBX3-201ENST00000337620 CAPN8A6NHC0 703 aa14.71□□□□□ -0.06
CBX3-201ENST00000337620 CD3EAPO15446 510 aaKnown RBP14.71□□□□□ -0.06
CBX3-201ENST00000337620 CLDN7O95471 211 aa14.71□□□□□ -0.06
CBX3-201ENST00000337620 POLR2LP62875 67 aaKnown RBP14.71□□□□□ -0.06
CBX3-201ENST00000337620 LRRC14Q15048 493 aa14.71□□□□□ -0.06
CBX3-201ENST00000337620 HNRNPA1L2Q32P51 320 aaKnown RBP14.71□□□□□ -0.06
CBX3-201ENST00000337620 POM121L1PQ3SYA9 428 aa14.71□□□□□ -0.06
CBX3-201ENST00000337620 USP45Q70EL2 814 aa14.71□□□□□ -0.06
CBX3-201ENST00000337620 ZC3HC1Q86WB0 502 aaKnown RBP14.71□□□□□ -0.06
CBX3-201ENST00000337620 STK40Q8N2I9 435 aa14.71□□□□□ -0.06
CBX3-201ENST00000337620 DCLK2Q8N568 766 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms