RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 SSX2IPQ9Y2D8 614 aa23.17■■□□□ 1.3
CLPTM1-201ENST00000337392 ANKRD36A6QL64 1941 aa23.17■■□□□ 1.3
CLPTM1-201ENST00000337392 ATP6AP2A0A1C7CYW4 349 aa23.17■■□□□ 1.3
CLPTM1-201ENST00000337392 PRRG1O14668 218 aa23.17■■□□□ 1.3
CLPTM1-201ENST00000337392 HDAC3O15379 428 aa23.17■■□□□ 1.3
CLPTM1-201ENST00000337392 CD3EAPO15446 510 aaKnown RBP23.17■■□□□ 1.3
CLPTM1-201ENST00000337392 ATP6AP2O75787 350 aa23.17■■□□□ 1.3
CLPTM1-201ENST00000337392 PRLP01236 227 aa23.17■■□□□ 1.3
CLPTM1-201ENST00000337392 ACRP10323 421 aa23.17■■□□□ 1.3
CLPTM1-201ENST00000337392 HADHAP40939 763 aa23.17■■□□□ 1.3
CLPTM1-201ENST00000337392 ABL2P42684 1182 aa23.17■■□□□ 1.3
CLPTM1-201ENST00000337392 MNX1P50219 401 aaPredicted RBP23.17■■□□□ 1.3
CLPTM1-201ENST00000337392 ATXN7L2Q5T6C5 722 aaPredicted RBP23.17■■□□□ 1.3
CLPTM1-201ENST00000337392 TLDC1Q6P9B6 456 aa23.17■■□□□ 1.3
CLPTM1-201ENST00000337392 SLC39A5Q6ZMH5 540 aa23.17■■□□□ 1.3
CLPTM1-201ENST00000337392 KDM1BQ8NB78 822 aa23.17■■□□□ 1.3
CLPTM1-201ENST00000337392 TLR9Q9NR96 1032 aa23.17■■□□□ 1.3
CLPTM1-201ENST00000337392 PTGDR2Q9Y5Y4 395 aa23.17■■□□□ 1.3
CLPTM1-201ENST00000337392 H3BMM5 538 aa23.16■■□□□ 1.3
CLPTM1-201ENST00000337392 ITGAXP20702 1163 aa23.16■■□□□ 1.3
CLPTM1-201ENST00000337392 GKP32189 559 aa23.16■■□□□ 1.3
CLPTM1-201ENST00000337392 YBEYP58557 167 aaPredicted RBP23.16■■□□□ 1.3
CLPTM1-201ENST00000337392 ARF5P84085 180 aa23.16■■□□□ 1.3
CLPTM1-201ENST00000337392 CXorf57Q6NSI4 855 aaKnown RBP23.16■■□□□ 1.3
CLPTM1-201ENST00000337392 TRIB3Q96RU7 358 aa23.16■■□□□ 1.3
CLPTM1-201ENST00000337392 MRPL57Q9BQC6 102 aaKnown RBP23.16■■□□□ 1.3
CLPTM1-201ENST00000337392 MFSD1Q9H3U5 465 aa23.16■■□□□ 1.3
CLPTM1-201ENST00000337392 NCKIPSDQ9NZQ3 722 aa23.16■■□□□ 1.3
CLPTM1-201ENST00000337392 TRPM5Q9NZQ8 1165 aa23.16■■□□□ 1.3
CLPTM1-201ENST00000337392 FNIP2Q9P278 1114 aa23.16■■□□□ 1.3
CLPTM1-201ENST00000337392 FCF1Q9Y324 198 aaKnown RBP23.16■■□□□ 1.3
CLPTM1-201ENST00000337392 MYOFQ9NZM1 2061 aa23.16■■□□□ 1.3
CLPTM1-201ENST00000337392 CD160O95971 181 aa23.16■■□□□ 1.3
CLPTM1-201ENST00000337392 C1RP00736 705 aa23.16■■□□□ 1.3
CLPTM1-201ENST00000337392 COX4I1P13073 169 aa23.16■■□□□ 1.3
CLPTM1-201ENST00000337392 SEMG2Q02383 582 aa23.16■■□□□ 1.3
CLPTM1-201ENST00000337392 CYTH1Q15438 398 aa23.16■■□□□ 1.3
CLPTM1-201ENST00000337392 PYDC1Q8WXC3 89 aa23.16■■□□□ 1.3
CLPTM1-201ENST00000337392 TTC1Q99614 292 aa23.16■■□□□ 1.3
CLPTM1-201ENST00000337392 DCLRE1BQ9H816 532 aa23.16■■□□□ 1.3
CLPTM1-201ENST00000337392 IKZF3Q9UKT9 509 aa23.16■■□□□ 1.3
CLPTM1-201ENST00000337392 UBFD1O14562 309 aaKnown RBP23.15■■□□□ 1.3
CLPTM1-201ENST00000337392 HOXA2O43364 376 aa23.15■■□□□ 1.3
CLPTM1-201ENST00000337392 OR1I1O60431 355 aa23.15■■□□□ 1.3
CLPTM1-201ENST00000337392 GLP2RO95838 553 aa23.15■■□□□ 1.3
CLPTM1-201ENST00000337392 EFEMP2O95967 443 aa23.15■■□□□ 1.3
CLPTM1-201ENST00000337392 TUFMP49411 452 aaKnown RBP23.15■■□□□ 1.3
CLPTM1-201ENST00000337392 C1QTNF8P60827 252 aa23.15■■□□□ 1.3
CLPTM1-201ENST00000337392 SMAD3P84022 425 aaKnown RBP23.15■■□□□ 1.3
CLPTM1-201ENST00000337392 CYP4F8P98187 520 aa23.15■■□□□ 1.3
CLPTM1-201ENST00000337392 FAM83EQ2M2I3 478 aa23.15■■□□□ 1.3
CLPTM1-201ENST00000337392 DNAJB7Q7Z6W7 309 aaPredicted RBP23.15■■□□□ 1.3
CLPTM1-201ENST00000337392 SNX32Q86XE0 403 aa23.15■■□□□ 1.3
CLPTM1-201ENST00000337392 ENDOVQ8N8Q3 282 aaKnown RBP23.15■■□□□ 1.3
CLPTM1-201ENST00000337392 SREK1Q8WXA9 508 aaKnown RBP23.15■■□□□ 1.3
CLPTM1-201ENST00000337392 SLC45A3Q96JT2 553 aa23.15■■□□□ 1.3
CLPTM1-201ENST00000337392 TM6SF2Q9BZW4 377 aa23.15■■□□□ 1.3
CLPTM1-201ENST00000337392 SMG9Q9H0W8 520 aaKnown RBP23.15■■□□□ 1.3
CLPTM1-201ENST00000337392 ANAPC1Q9H1A4 1944 aa23.15■■□□□ 1.3
CLPTM1-201ENST00000337392 CXCL10P02778 98 aa23.15■■□□□ 1.3
CLPTM1-201ENST00000337392 LTA4HP09960 611 aaKnown RBP23.15■■□□□ 1.3
CLPTM1-201ENST00000337392 MBL2P11226 248 aaPredicted RBP23.15■■□□□ 1.3
CLPTM1-201ENST00000337392 FMO4P31512 558 aa23.15■■□□□ 1.3
CLPTM1-201ENST00000337392 ALDH1A3P47895 512 aa23.15■■□□□ 1.3
CLPTM1-201ENST00000337392 NAA25Q14CX7 972 aa23.15■■□□□ 1.3
CLPTM1-201ENST00000337392 TAF11Q15544 211 aa23.15■■□□□ 1.3
CLPTM1-201ENST00000337392 RANBP9Q96S59 729 aa23.15■■□□□ 1.3
CLPTM1-201ENST00000337392 GIMAP2Q9UG22 337 aa23.15■■□□□ 1.3
CLPTM1-201ENST00000337392 PPM1HQ9ULR3 514 aa23.15■■□□□ 1.3
CLPTM1-201ENST00000337392 CLEC4EQ9ULY5 219 aa23.15■■□□□ 1.3
CLPTM1-201ENST00000337392 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.14■■□□□ 1.3
CLPTM1-201ENST00000337392 SLC7A4O43246 635 aa23.14■■□□□ 1.3
CLPTM1-201ENST00000337392 CDH4P55283 916 aa23.14■■□□□ 1.3
CLPTM1-201ENST00000337392 ZNF177Q13360 481 aaPredicted RBP23.14■■□□□ 1.3
CLPTM1-201ENST00000337392 PIANPQ8IYJ0 282 aa23.14■■□□□ 1.3
CLPTM1-201ENST00000337392 STMN2Q93045 179 aa23.14■■□□□ 1.3
CLPTM1-201ENST00000337392 TMEM169Q96HH4 297 aa23.14■■□□□ 1.3
CLPTM1-201ENST00000337392 CDKN2AIPNLQ96HQ2 116 aa23.14■■□□□ 1.3
CLPTM1-201ENST00000337392 UBXN10Q96LJ8 280 aa23.14■■□□□ 1.3
CLPTM1-201ENST00000337392 MGME1Q9BQP7 344 aa23.14■■□□□ 1.3
CLPTM1-201ENST00000337392 SIKE1Q9BRV8 207 aa23.14■■□□□ 1.3
CLPTM1-201ENST00000337392 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.14■■□□□ 1.3
CLPTM1-201ENST00000337392 AFF4Q9UHB7 1163 aaKnown RBP23.14■■□□□ 1.3
CLPTM1-201ENST00000337392 A8MX80 341 aa23.14■■□□□ 1.29
CLPTM1-201ENST00000337392 STX16-NPEPL1H3BU86 382 aa23.14■■□□□ 1.29
CLPTM1-201ENST00000337392 INSIG1O15503 277 aa23.14■■□□□ 1.29
CLPTM1-201ENST00000337392 TBL1XO60907 577 aa23.14■■□□□ 1.29
CLPTM1-201ENST00000337392 APOA4P06727 396 aa23.14■■□□□ 1.29
CLPTM1-201ENST00000337392 SULT2A1Q06520 285 aa23.14■■□□□ 1.29
CLPTM1-201ENST00000337392 NSUN2Q08J23 767 aaKnown RBP eCLIP23.14■■□□□ 1.29
CLPTM1-201ENST00000337392 GLT6D1Q7Z4J2 308 aa23.14■■□□□ 1.29
CLPTM1-201ENST00000337392 ISCA2Q86U28 154 aa23.14■■□□□ 1.29
CLPTM1-201ENST00000337392 NSUN5Q96P11 429 aaKnown RBP23.14■■□□□ 1.29
CLPTM1-201ENST00000337392 SLC30A3Q99726 388 aa23.14■■□□□ 1.29
CLPTM1-201ENST00000337392 SH3BP1Q9Y3L3 701 aa23.14■■□□□ 1.29
CLPTM1-201ENST00000337392 COL4A6Q14031 1691 aa23.14■■□□□ 1.29
CLPTM1-201ENST00000337392 A0A1B0GTL3 188 aa23.13■■□□□ 1.29
CLPTM1-201ENST00000337392 PIK3R1P27986 724 aa23.13■■□□□ 1.29
CLPTM1-201ENST00000337392 CLCN5P51795 746 aa23.13■■□□□ 1.29
CLPTM1-201ENST00000337392 IKBKEQ14164 716 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms