RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 RIOX2Q8IUF8 465 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 ARMC8Q8IUR7 673 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 ZNF384Q8TF68 577 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 ZNF670Q9BS34 389 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 DPY30Q9C005 99 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 ROGDIQ9GZN7 287 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 MIR1-1HGQ9H1L0 117 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 SMPD4Q9NXE4 827 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 PCDHGC3Q9UN70 934 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 FAM50BQ9Y247 325 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 NALCNQ8IZF0 1738 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 GUCY1B2O75343 617 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 CPSF4O95639 269 aaKnown RBP16.11■□□□□ 0.17
NPHP3-201ENST00000337331 HSMCR30P0CW71 290 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 NPR3P17342 541 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 SLC18A2Q05940 514 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 TUBA3CQ13748 450 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 HIST2H2ACQ16777 129 aaPredicted RBP16.11■□□□□ 0.17
NPHP3-201ENST00000337331 HIST2H2AA3Q6FI13 130 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 CDHR3Q6ZTQ4 885 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 SNX29P2Q8IUI4 249 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 ASCC1Q8N9N2 400 aaKnown RBP16.11■□□□□ 0.17
NPHP3-201ENST00000337331 MTERF3Q96E29 417 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 NUAK2Q9H093 628 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 CDH19Q9H159 772 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 FBXO44Q9H4M3 255 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 ATP13A1Q9HD20 1204 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 MTRRQ9UBK8 725 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 PADI4Q9UM07 663 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 ANKRD6Q9Y2G4 727 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 NRP2O60462 931 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 RNASEH2AO75792 299 aaKnown RBP16.11■□□□□ 0.17
NPHP3-201ENST00000337331 CST3P01034 146 aaPredicted RBP16.11■□□□□ 0.17
NPHP3-201ENST00000337331 MERTKQ12866 999 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 MSS51Q4VC12 460 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 MRPS31Q92665 395 aaKnown RBP16.11■□□□□ 0.17
NPHP3-201ENST00000337331 EFHD2Q96C19 240 aaPredicted RBP16.11■□□□□ 0.17
NPHP3-201ENST00000337331 OMDQ99983 421 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 DNAJC28Q9NX36 388 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 CDV3Q9UKY7 258 aaKnown RBP16.11■□□□□ 0.17
NPHP3-201ENST00000337331 A8MV72 311 aaPredicted RBP16.1■□□□□ 0.17
NPHP3-201ENST00000337331 TMCC2O75069 709 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 ATE1O95260 518 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 CRHR1P34998 444 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 CCDC28AQ8IWP9 274 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 ZNF781Q8N8C0 355 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 ANKRD52Q8NB46 1076 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 SEPT8Q92599 483 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 TBATAQ96M53 351 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 ELOVL4Q9GZR5 314 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 EPS8L2Q9H6S3 715 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 CASZ1Q86V15 1759 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 KCNU1A8MYU2 1149 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 M0QX08 132 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 UGT2B4P06133 528 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 FRG1Q14331 258 aaKnown RBP16.1■□□□□ 0.17
NPHP3-201ENST00000337331 MFSD10Q14728 455 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 SMUG1Q53HV7 270 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 PITRM1Q5JRX3 1037 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 BORAQ6PGQ7 559 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 KBTBD6Q86V97 674 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 TBC1D19Q8N5T2 526 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 LRRC20Q8TCA0 184 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 BSNDQ8WZ55 320 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 CPXM1Q96SM3 734 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 TLR8Q9NR97 1041 aaKnown RBP16.1■□□□□ 0.17
NPHP3-201ENST00000337331 PCDHB5Q9Y5E4 795 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 CLUHO75153 1309 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 MON2Q7Z3U7 1717 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 YDJCA8MPS7 323 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 PCNAP12004 261 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 SLC13A2Q13183 592 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 FAM98BQ52LJ0 330 aaKnown RBP16.1■□□□□ 0.17
NPHP3-201ENST00000337331 PPM1JQ5JR12 505 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 TMEM198Q66K66 360 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 NUDT18Q6ZVK8 323 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 CMC1Q7Z7K0 106 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 IGFN1Q86VF2 1251 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 SPPL2CQ8IUH8 684 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 FAM9CQ8IZT9 166 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 RERGLQ9H628 205 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 GBA2Q9HCG7 927 aaPredicted RBP16.1■□□□□ 0.17
NPHP3-201ENST00000337331 NOX1Q9Y5S8 564 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 ANKRD34BA5PLL1 514 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 BTN3A1O00481 513 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 ARIH2O95376 493 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 MPSTP25325 297 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 AXLP30530 894 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 CCT8P50990 548 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 MAP1SQ66K74 1059 aaPredicted RBP16.1■□□□□ 0.17
NPHP3-201ENST00000337331 ZCCHC8Q6NZY4 707 aaKnown RBP16.1■□□□□ 0.17
NPHP3-201ENST00000337331 DEPDC4Q8N2C3 294 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 GRIN3AQ8TCU5 1115 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 ACMSDQ8TDX5 336 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 PRRG3Q9BZD7 231 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 ALG9Q9H6U8 611 aa16.1■□□□□ 0.17
NPHP3-201ENST00000337331 GNG14A0A1W2PPG7 69 aa16.09■□□□□ 0.17
NPHP3-201ENST00000337331 MGAT4DA6NG13 374 aa16.09■□□□□ 0.17
NPHP3-201ENST00000337331 HTRA2O43464 458 aaPredicted RBP16.09■□□□□ 0.17
NPHP3-201ENST00000337331 NRLP54845 237 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms