RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 C1orf146Q5VVC0 180 aa9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 MRPL43Q8N983 215 aaKnown RBP9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 NETO2Q8NC67 525 aa9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 SEC16BQ96JE7 1060 aa9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 ECT2Q9H8V3 914 aa9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 ENO1P06733 434 aaKnown RBP9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 SCAPQ12770 1279 aa9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 DDX39BQ13838 428 aaKnown RBP9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 HIC1Q14526 733 aa9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 XKR4Q5GH76 650 aa9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 RNASEH2BQ5TBB1 312 aaKnown RBP9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 LRRN4Q8WUT4 740 aa9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 FAM83DQ9H4H8 585 aa9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 RMND5AQ9H871 391 aa9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 WNT6Q9Y6F9 365 aa9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 PM20D1Q6GTS8 502 aa9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 SLC8B1Q6J4K2 584 aa9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 SLC35B2Q8TB61 432 aa9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 STARD8Q92502 1023 aa9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 AP2M1Q96CW1 435 aa9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 BUD23O43709 281 aaKnown RBP9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 EDN1P05305 212 aa9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 FAM189BP81408 668 aa9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 KLHL35Q6PF15 583 aa9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 RAVER1Q8IY67 606 aaKnown RBP9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 OTUB1Q96FW1 271 aaPredicted RBP9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 MRPL46Q9H2W6 279 aaKnown RBP9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 SUV39H2Q9H5I1 410 aa9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 GDE1Q9NZC3 331 aa9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 PRKCQQ04759 706 aa9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 VITQ6UXI7 678 aa9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 FAM124AQ86V42 546 aa9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 OR2AP1Q8NGE2 309 aa9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 FAM161BQ96MY7 647 aa9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 MAPRE3Q9UPY8 281 aa9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 SCN1AP35498 2009 aa9.34□□□□□ -0.91
FNDC3B-201ENST00000336824 AVILO75366 819 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 ITGB1P05556 798 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 AKT2P31751 481 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 TRPM8Q7Z2W7 1104 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 WDTC1Q8N5D0 677 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 LRRN4CLQ8ND94 238 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 RNF217Q8TC41 542 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 TRMT2BQ96GJ1 504 aaKnown RBP9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 OTOFQ9HC10 1997 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 TM7SF2O76062 418 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 WASP42768 502 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 IRAK1P51617 712 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 HK2P52789 917 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 HPCAP84074 193 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 SCML4Q8N228 414 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 TCAIMQ8N3R3 496 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 HDDC3Q8N4P3 179 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 SPATA22Q8NHS9 363 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 VWA7Q9Y334 891 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 PCDHGC4Q9Y5F7 938 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 SOCS5O75159 536 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 RPL26P61254 145 aaKnown RBP9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 OGDHQ02218 1023 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 DSC1Q08554 894 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 ITIH4Q14624 930 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 GALNTL6Q49A17 601 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 MARK2Q7KZI7 788 aaKnown RBP9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 MILR1Q7Z6M3 343 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 RBBP8Q99708 897 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 HGH1Q9BTY7 390 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 LRRC4CQ9HCJ2 640 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 SPHK2Q9NRA0 654 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 RPL26L1Q9UNX3 145 aaKnown RBP9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 PRAMEF1O95521 474 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 COL6A2P12110 1019 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 LY6G5CQ5SRR4 150 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 POMKQ9H5K3 350 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 NPC1O15118 1278 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 SKAP2O75563 359 aaPredicted RBP9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 MT-CYBP00156 380 aaPredicted RBP9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 RRP15Q9Y3B9 282 aaKnown RBP9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 SHROOM3Q8TF72 1996 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 GNG14A0A1W2PPG7 69 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 H3BQF6 201 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 PSMD12O00232 456 aaPredicted RBP9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 PHGDHO43175 533 aaKnown RBP9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 GUCY1B2O75343 617 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 CCNDBP1O95273 360 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 AP2B1P63010 937 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 NR6A1Q15406 480 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 ZNF776Q68DI1 518 aaPredicted RBP9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 TSTD1Q8NFU3 115 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 LZICQ8WZA0 190 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 AZIN2Q96A70 460 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 ZNF514Q96K75 400 aaPredicted RBP9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 QRFPRQ96P65 431 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 TUBGCP5Q96RT8 1024 aa9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 WRAP53Q9BUR4 548 aaKnown RBP9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 INTS10Q9NVR2 710 aaKnown RBP9.33□□□□□ -0.92
FNDC3B-201ENST00000336824 H3BM21 787 aa9.32□□□□□ -0.92
FNDC3B-201ENST00000336824 ADH1BP00325 375 aa9.32□□□□□ -0.92
FNDC3B-201ENST00000336824 HLA-DQB2P05538 268 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms