RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 C16orf46Q6P387 395 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 SLC30A10Q6XR72 485 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 PRR23BQ6ZRT6 265 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 RBFAQ8N0V3 343 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 TTLL2Q9BWV7 592 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 TBC1D10AQ9BXI6 508 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 SMURF2Q9HAU4 748 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 C3orf14Q9HBI5 128 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 STOX2Q9P2F5 926 aaPredicted RBP13.12□□□□□ -0.31
HLCS-201ENST00000336648 EFR3BQ9Y2G0 817 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 SLC27A6Q9Y2P4 619 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 TRIM3O75382 744 aaPredicted RBP13.12□□□□□ -0.31
HLCS-201ENST00000336648 FGF19O95750 216 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 PRKAR2AP13861 404 aaKnown RBP13.12□□□□□ -0.31
HLCS-201ENST00000336648 HGFP14210 728 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 CBX5P45973 191 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 PTDSS1P48651 473 aaKnown RBP13.12□□□□□ -0.31
HLCS-201ENST00000336648 TUBA3CQ13748 450 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 OCLNQ16625 522 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 GCNT7Q6ZNI0 430 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 EFCAB3Q8N7B9 438 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 HDAC7Q8WUI4 952 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 CPA4Q9UI42 421 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 GIT1Q9Y2X7 761 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 SAMHD1Q9Y3Z3 626 aaKnown RBP13.12□□□□□ -0.31
HLCS-201ENST00000336648 TSPOAP1O95153 1857 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 CPS1P31327 1500 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 FAM237BA0A1B0GVD1 139 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 PEX11AO75192 247 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 HTR1BP28222 390 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 CDH8P55286 799 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 HSPA14Q0VDF9 509 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 BST1Q10588 318 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 IKBKEQ14164 716 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 KCNA10Q16322 511 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 HKDC1Q2TB90 917 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 APTXQ7Z2E3 356 aaKnown RBP13.12□□□□□ -0.31
HLCS-201ENST00000336648 BEND7Q8N7W2 519 aaPredicted RBP13.12□□□□□ -0.31
HLCS-201ENST00000336648 SPACA7Q96KW9 195 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 DHX33Q9H6R0 707 aaKnown RBP13.12□□□□□ -0.31
HLCS-201ENST00000336648 TMEM39AQ9NV64 488 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 DMTF1Q9Y222 760 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 ATXN2Q99700 1313 aaKnown RBP13.12□□□□□ -0.31
HLCS-201ENST00000336648 IQSEC2Q5JU85 1478 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 CYP3A7-CYP3A51PA0A087WV96 503 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 CHST10O43529 356 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 RGS10O43665 173 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 LGALS2P05162 132 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 RB1P06400 928 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 ITGA2BP08514 1039 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 CYP3A7P24462 503 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 HPS6Q86YV9 775 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 LRRC20Q8TCA0 184 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 FAR1Q8WVX9 515 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 SIPA1Q96FS4 1042 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 SNRNP25Q9BV90 132 aaKnown RBP13.11□□□□□ -0.31
HLCS-201ENST00000336648 PTPRHQ9HD43 1115 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 SEMA3GQ9NS98 782 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 EXD2Q9NVH0 621 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 DERAQ9Y315 318 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 A0A1W2PQ67 120 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 SPTLC1O15269 473 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 CCNKO75909 580 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 RBM44Q6ZP01 1051 aaKnown RBP13.11□□□□□ -0.31
HLCS-201ENST00000336648 GJD3Q8N144 294 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 ADAM32Q8TC27 787 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 ZNF558Q96NG5 402 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 ARHGEF33A8MVX0 844 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 DNAJA2O60884 412 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 ADORA2AP29274 412 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 HTR7P34969 479 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 SOX10P56693 466 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 RPL38P63173 70 aaKnown RBP13.11□□□□□ -0.31
HLCS-201ENST00000336648 NBPF12Q5TAG4 269 aaPredicted RBP13.11□□□□□ -0.31
HLCS-201ENST00000336648 FAM183BPQ6ZVS7 135 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 RNF44Q7L0R7 432 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 DEFB128Q7Z7B8 93 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 RASAL3Q86YV0 1011 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 ADCY4Q8NFM4 1077 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 PTCD2Q8WV60 388 aaKnown RBP13.11□□□□□ -0.31
HLCS-201ENST00000336648 CHMP1AQ9HD42 196 aaPredicted RBP13.11□□□□□ -0.31
HLCS-201ENST00000336648 NECTIN3Q9NQS3 549 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 FBXO6Q9NRD1 293 aaPredicted RBP13.11□□□□□ -0.31
HLCS-201ENST00000336648 CIDEBQ9UHD4 219 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 ALOX15BO15296 676 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 OR10H3O60404 316 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 ZNF37AP17032 561 aaPredicted RBP13.11□□□□□ -0.31
HLCS-201ENST00000336648 SLC25A3Q00325 362 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 TTMPQ5BVD1 217 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 XKR6Q5GH73 641 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 PEX5LQ8IYB4 626 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 GAL3ST3Q96A11 431 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 CDH19Q9H159 772 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 TTYH1Q9H313 450 aaPredicted RBP13.11□□□□□ -0.31
HLCS-201ENST00000336648 RCOR3Q9P2K3 495 aaPredicted RBP13.11□□□□□ -0.31
HLCS-201ENST00000336648 SUCOQ9UBS9 1254 aaKnown RBP13.11□□□□□ -0.31
HLCS-201ENST00000336648 TBC1D24Q9ULP9 559 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 ZNF780BQ9Y6R6 833 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 BCORL1Q5H9F3 1711 aa13.11□□□□□ -0.31
HLCS-201ENST00000336648 PRMT3O60678 531 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms