RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 TMC3Q7Z5M5 1100 aa17.54■□□□□ 0.4
CHGA-202ENST00000334654 NDUFAF2Q8N183 169 aa17.54■□□□□ 0.4
CHGA-202ENST00000334654 DNAAF3Q8N9W5 541 aa17.54■□□□□ 0.4
CHGA-202ENST00000334654 KDM4CQ9H3R0 1056 aa17.54■□□□□ 0.4
CHGA-202ENST00000334654 SGK2Q9HBY8 427 aa17.54■□□□□ 0.4
CHGA-202ENST00000334654 ZFR2Q9UPR6 939 aaKnown RBP17.54■□□□□ 0.4
CHGA-202ENST00000334654 WDFY4Q6ZS81 3184 aa17.53■□□□□ 0.4
CHGA-202ENST00000334654 GALR2O43603 387 aaPredicted RBP17.53■□□□□ 0.4
CHGA-202ENST00000334654 TSPAN6O43657 245 aa17.53■□□□□ 0.4
CHGA-202ENST00000334654 SP9P0CG40 484 aa17.53■□□□□ 0.4
CHGA-202ENST00000334654 CD6P30203 668 aa17.53■□□□□ 0.4
CHGA-202ENST00000334654 OXTRP30559 389 aa17.53■□□□□ 0.4
CHGA-202ENST00000334654 TNNT3P45378 269 aaPredicted RBP17.53■□□□□ 0.4
CHGA-202ENST00000334654 CARSP49589 748 aaKnown RBP17.53■□□□□ 0.4
CHGA-202ENST00000334654 PLTPP55058 493 aa17.53■□□□□ 0.4
CHGA-202ENST00000334654 SARNPP82979 210 aaKnown RBP17.53■□□□□ 0.4
CHGA-202ENST00000334654 CALCOCO2Q13137 446 aa17.53■□□□□ 0.4
CHGA-202ENST00000334654 ERAP2Q6P179 960 aa17.53■□□□□ 0.4
CHGA-202ENST00000334654 LYSMD3Q7Z3D4 306 aa17.53■□□□□ 0.4
CHGA-202ENST00000334654 LONP2Q86WA8 852 aa17.53■□□□□ 0.4
CHGA-202ENST00000334654 MPP5Q8N3R9 675 aa17.53■□□□□ 0.4
CHGA-202ENST00000334654 BRSK1Q8TDC3 778 aa17.53■□□□□ 0.4
CHGA-202ENST00000334654 BLOC1S5Q8TDH9 187 aa17.53■□□□□ 0.4
CHGA-202ENST00000334654 SIGLEC10Q96LC7 697 aa17.53■□□□□ 0.4
CHGA-202ENST00000334654 XAB2Q9HCS7 855 aaKnown RBP17.53■□□□□ 0.4
CHGA-202ENST00000334654 PREBQ9HCU5 417 aa17.53■□□□□ 0.4
CHGA-202ENST00000334654 FAM114A2Q9NRY5 505 aa17.53■□□□□ 0.4
CHGA-202ENST00000334654 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.53■□□□□ 0.4
CHGA-202ENST00000334654 ZNF711Q9Y462 761 aa17.53■□□□□ 0.4
CHGA-202ENST00000334654 V9GYY5 206 aaPredicted RBP17.53■□□□□ 0.4
CHGA-202ENST00000334654 FANCMQ8IYD8 2048 aa17.53■□□□□ 0.4
CHGA-202ENST00000334654 CACNA1HO95180 2353 aa17.52■□□□□ 0.4
CHGA-202ENST00000334654 H0Y858 1186 aa17.52■□□□□ 0.4
CHGA-202ENST00000334654 LDB2O43679 373 aa17.52■□□□□ 0.4
CHGA-202ENST00000334654 MMP20O60882 483 aa17.52■□□□□ 0.4
CHGA-202ENST00000334654 SEMA4FO95754 770 aa17.52■□□□□ 0.4
CHGA-202ENST00000334654 CYP2A6P11509 494 aaPredicted RBP17.52■□□□□ 0.4
CHGA-202ENST00000334654 BCKDHBP21953 392 aa17.52■□□□□ 0.4
CHGA-202ENST00000334654 MGAT1P26572 445 aa17.52■□□□□ 0.4
CHGA-202ENST00000334654 NPY2RP49146 381 aa17.52■□□□□ 0.4
CHGA-202ENST00000334654 LIG3P49916 1009 aa17.52■□□□□ 0.4
CHGA-202ENST00000334654 NUBP1P53384 320 aa17.52■□□□□ 0.4
CHGA-202ENST00000334654 SESN2P58004 480 aaPredicted RBP17.52■□□□□ 0.4
CHGA-202ENST00000334654 PPP2CBP62714 309 aa17.52■□□□□ 0.4
CHGA-202ENST00000334654 PPP2CAP67775 309 aa17.52■□□□□ 0.4
CHGA-202ENST00000334654 CRADDP78560 199 aa17.52■□□□□ 0.4
CHGA-202ENST00000334654 POU6F1Q14863 301 aa17.52■□□□□ 0.4
CHGA-202ENST00000334654 TMEM259Q4ZIN3 620 aa17.52■□□□□ 0.4
CHGA-202ENST00000334654 USP39Q53GS9 565 aaKnown RBP17.52■□□□□ 0.4
CHGA-202ENST00000334654 LRRC66Q68CR7 880 aa17.52■□□□□ 0.4
CHGA-202ENST00000334654 NEK5Q6P3R8 708 aa17.52■□□□□ 0.4
CHGA-202ENST00000334654 OR2T34Q8NGX1 318 aa17.52■□□□□ 0.4
CHGA-202ENST00000334654 WRAP53Q9BUR4 548 aaKnown RBP17.52■□□□□ 0.4
CHGA-202ENST00000334654 TRABDQ9H4I3 376 aa17.52■□□□□ 0.4
CHGA-202ENST00000334654 C6orf106Q9H6K1 298 aaPredicted RBP17.52■□□□□ 0.4
CHGA-202ENST00000334654 HACD3Q9P035 362 aa17.52■□□□□ 0.4
CHGA-202ENST00000334654 KCTD3Q9Y597 815 aa17.52■□□□□ 0.4
CHGA-202ENST00000334654 SPAG17Q6Q759 2223 aa17.52■□□□□ 0.4
CHGA-202ENST00000334654 TBC1D3DA0A087WVF3 549 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 TBC1D3IA0A087WXS9 549 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 TBC1D3EA0A087X179 549 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 TBC1D3KA0A087X1G2 549 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 C1orf232A0A0U1RR37 186 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 TBC1D3FA6NER0 549 aaPredicted RBP17.51■□□□□ 0.39
CHGA-202ENST00000334654 TBC1D3LB9A6J9 549 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 AP3B1O00203 1094 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 NDC80O14777 642 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 BANF1O75531 89 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 C1SP09871 688 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 TBC1D3HP0C7X1 549 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 ZNF30P17039 623 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 STC1P52823 247 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 CAV1Q03135 178 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 FGL2Q14314 439 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 TAF1AQ15573 450 aaPredicted RBP17.51■□□□□ 0.39
CHGA-202ENST00000334654 ERCC6LQ2NKX8 1250 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 SEL1L3Q68CR1 1132 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 TBC1D3GQ6DHY5 549 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 TBC1D3CQ6IPX1 549 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 RFLNAQ6ZTI6 216 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 HSD11B1LQ7Z5J1 315 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 TBC1D3Q8IZP1 549 aaPredicted RBP17.51■□□□□ 0.39
CHGA-202ENST00000334654 ZCCHC9Q8N567 271 aaKnown RBP17.51■□□□□ 0.39
CHGA-202ENST00000334654 ZBTB44Q8NCP5 570 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 COQ10AQ96MF6 247 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 RANBP9Q96S59 729 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 SRPK1Q96SB4 655 aaKnown RBP17.51■□□□□ 0.39
CHGA-202ENST00000334654 WDR83Q9BRX9 315 aaKnown RBP17.51■□□□□ 0.39
CHGA-202ENST00000334654 GPR174Q9BXC1 333 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 FAM126AQ9BYI3 521 aaPredicted RBP17.51■□□□□ 0.39
CHGA-202ENST00000334654 FRMD8Q9BZ67 464 aaPredicted RBP17.51■□□□□ 0.39
CHGA-202ENST00000334654 ZFYVE1Q9HBF4 777 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 SYBUQ9NX95 663 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 ARL5AQ9Y689 179 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 THADAQ6YHU6 1953 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 SDK1Q7Z5N4 2213 aa17.51■□□□□ 0.39
CHGA-202ENST00000334654 PLXNA2O75051 1894 aa17.5■□□□□ 0.39
CHGA-202ENST00000334654 IGLON5A6NGN9 336 aa17.5■□□□□ 0.39
CHGA-202ENST00000334654 MROH6A6NGR9 719 aa17.5■□□□□ 0.39
CHGA-202ENST00000334654 E7ESA3 106 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms