RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 B4GAT1O43505 415 aa13.78□□□□□ -0.2
SYNE3-201ENST00000334258 KDM1AO60341 852 aa13.78□□□□□ -0.2
SYNE3-201ENST00000334258 CYP2B6P20813 491 aa13.78□□□□□ -0.2
SYNE3-201ENST00000334258 INTS11Q5TA45 600 aaKnown RBP13.78□□□□□ -0.2
SYNE3-201ENST00000334258 IPMKQ8NFU5 416 aa13.78□□□□□ -0.2
SYNE3-201ENST00000334258 ZC3H15Q8WU90 426 aaKnown RBP13.78□□□□□ -0.2
SYNE3-201ENST00000334258 CHPT1Q8WUD6 406 aa13.78□□□□□ -0.2
SYNE3-201ENST00000334258 AFG1LQ8WV93 481 aa13.78□□□□□ -0.2
SYNE3-201ENST00000334258 BEGAINQ9BUH8 593 aa13.78□□□□□ -0.2
SYNE3-201ENST00000334258 SMPD3Q9NY59 655 aaPredicted RBP13.78□□□□□ -0.2
SYNE3-201ENST00000334258 TRAF6Q9Y4K3 522 aa13.78□□□□□ -0.2
SYNE3-201ENST00000334258 FAM72CH0Y354 149 aa13.77□□□□□ -0.2
SYNE3-201ENST00000334258 SNAP91O60641 907 aa13.77□□□□□ -0.2
SYNE3-201ENST00000334258 OXTRP30559 389 aa13.77□□□□□ -0.2
SYNE3-201ENST00000334258 CAPGP40121 348 aa13.77□□□□□ -0.2
SYNE3-201ENST00000334258 CASP2P42575 452 aa13.77□□□□□ -0.2
SYNE3-201ENST00000334258 KPNA1P52294 538 aaPredicted RBP13.77□□□□□ -0.2
SYNE3-201ENST00000334258 TMTC4Q5T4D3 741 aa13.77□□□□□ -0.2
SYNE3-201ENST00000334258 FAM72AQ5TYM5 149 aa13.77□□□□□ -0.2
SYNE3-201ENST00000334258 ZNF470Q6ECI4 717 aa13.77□□□□□ -0.2
SYNE3-201ENST00000334258 FAM72DQ6L9T8 149 aa13.77□□□□□ -0.2
SYNE3-201ENST00000334258 FAM72BQ86X60 149 aa13.77□□□□□ -0.2
SYNE3-201ENST00000334258 SEPHS2Q99611 448 aa13.77□□□□□ -0.2
SYNE3-201ENST00000334258 HEPHQ9BQS7 1158 aa13.77□□□□□ -0.2
SYNE3-201ENST00000334258 IFT80Q9P2H3 777 aaPredicted RBP13.77□□□□□ -0.2
SYNE3-201ENST00000334258 RBMX2Q9Y388 322 aaKnown RBP13.77□□□□□ -0.2
SYNE3-201ENST00000334258 A0A0J9YYE9 177 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 ERI2A8K979 691 aaKnown RBP13.77□□□□□ -0.21
SYNE3-201ENST00000334258 NME4O00746 187 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 VTNP04004 478 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 MTHFD1P11586 935 aaKnown RBP13.77□□□□□ -0.21
SYNE3-201ENST00000334258 CYP2C9P11712 490 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 MATN1P21941 496 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 KCNA5P22460 613 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 JAK1P23458 1154 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 CD68P34810 354 aaPredicted RBP13.77□□□□□ -0.21
SYNE3-201ENST00000334258 CLPPQ16740 277 aaPredicted RBP13.77□□□□□ -0.21
SYNE3-201ENST00000334258 FAM45BPQ6NSW5 357 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 ESRP1Q6NXG1 681 aaKnown RBP13.77□□□□□ -0.21
SYNE3-201ENST00000334258 OTOP3Q7RTS5 596 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 FAM45AQ8TCE6 357 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 ADAMTS16Q8TE57 1224 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 TAMM41Q96BW9 452 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 CELF6Q96J87 481 aaKnown RBP13.77□□□□□ -0.21
SYNE3-201ENST00000334258 GBA3Q9H227 469 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 STAP1Q9ULZ2 295 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 SNAP29O95721 258 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 OXSR1O95747 527 aaPredicted RBP13.77□□□□□ -0.21
SYNE3-201ENST00000334258 ALBP02768 609 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 RPS9P46781 194 aaKnown RBP13.77□□□□□ -0.21
SYNE3-201ENST00000334258 ZNF618Q5T7W0 954 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 FAAH2Q6GMR7 532 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 DPP9Q86TI2 863 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 RETREG3Q86VR2 466 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 RAVER1Q8IY67 606 aaKnown RBP13.77□□□□□ -0.21
SYNE3-201ENST00000334258 BRI3BPQ8WY22 251 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 CASP10Q92851 521 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 DUS3LQ96G46 650 aaKnown RBP13.77□□□□□ -0.21
SYNE3-201ENST00000334258 PIF1Q9H611 641 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 TRPV5Q9NQA5 729 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 AGPAT4Q9NRZ5 378 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 ATAD3AQ9NVI7 634 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 GIMAP2Q9UG22 337 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 SEPT3Q9UH03 358 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 SARDHQ9UL12 918 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 DGKBQ9Y6T7 804 aa13.77□□□□□ -0.21
SYNE3-201ENST00000334258 IGKV6-21A0A0C4DH24 114 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 CHRM3P20309 590 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 LMO2P25791 158 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 ACADSBP45954 432 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 CDH13P55290 713 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 TPD52P55327 224 aaPredicted RBP13.76□□□□□ -0.21
SYNE3-201ENST00000334258 ARPC4P59998 168 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 FUT11Q495W5 492 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 PIGZQ86VD9 579 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 SIX5Q8N196 739 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 SPATA22Q8NHS9 363 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 TANKQ92844 425 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 GPR78Q96P69 363 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 CD320Q9NPF0 282 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.76□□□□□ -0.21
SYNE3-201ENST00000334258 FBXO9Q9UK97 447 aaPredicted RBP13.76□□□□□ -0.21
SYNE3-201ENST00000334258 ERGIC3Q9Y282 383 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 NME7Q9Y5B8 376 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 TRIM64CA6NLI5 447 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 AQP12BA6NM10 295 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 KPNA4O00629 521 aaPredicted RBP13.76□□□□□ -0.21
SYNE3-201ENST00000334258 SOCS7O14512 581 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 IPO13O94829 963 aaKnown RBP13.76□□□□□ -0.21
SYNE3-201ENST00000334258 GNL1P36915 607 aaPredicted RBP13.76□□□□□ -0.21
SYNE3-201ENST00000334258 OCA2Q04671 838 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 LAMC2Q13753 1193 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 PAFAH1B3Q15102 231 aaKnown RBP13.76□□□□□ -0.21
SYNE3-201ENST00000334258 SYPL2Q5VXT5 272 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 SMYD5Q6GMV2 418 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 AQP12AQ8IXF9 295 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 TRUB1Q8WWH5 349 aaKnown RBP13.76□□□□□ -0.21
SYNE3-201ENST00000334258 GLT1D1Q96MS3 346 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 GPR20Q99678 358 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 PTPN18Q99952 460 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms