RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 PDLIM1O00151 329 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 PSMD3O43242 534 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 B3GAT3O94766 335 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 GNAO1P09471 354 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 DNAJB13P59910 316 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 DSC2Q02487 901 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 STX5Q13190 355 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 CAPRIN1Q14444 709 aaKnown RBP12.36□□□□□ -0.43
VPS33B-201ENST00000333371 LRRC23Q53EV4 343 aaPredicted RBP12.36□□□□□ -0.43
VPS33B-201ENST00000333371 AGMOQ6ZNB7 445 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 TMEM126BQ8IUX1 230 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 TSPAN14Q8NG11 270 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 PTERQ96BW5 349 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 CCT7Q99832 543 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 NOL6Q9H6R4 1146 aaKnown RBP12.36□□□□□ -0.43
VPS33B-201ENST00000333371 NMUR1Q9HB89 426 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 CSNK1G1Q9HCP0 422 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 ENTPD7Q9NQZ7 604 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 UTP6Q9NYH9 597 aaKnown RBP12.36□□□□□ -0.43
VPS33B-201ENST00000333371 ATXN10Q9UBB4 475 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 CD300AQ9UGN4 299 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 IPO11Q9UI26 975 aaKnown RBP12.36□□□□□ -0.43
VPS33B-201ENST00000333371 PTCH2Q9Y6C5 1203 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 HTTP42858 3142 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 NRP2O60462 931 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 ETFBP38117 255 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 NDST2P52849 883 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 SLC10A7Q0GE19 358 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 AGAP9Q5VTM2 703 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 TMEM86AQ8N2M4 240 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 HDAC10Q969S8 669 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 PABPC5Q96DU9 382 aaKnown RBP12.35□□□□□ -0.43
VPS33B-201ENST00000333371 ZNF597Q96LX8 424 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 NSUN5Q96P11 429 aaKnown RBP12.35□□□□□ -0.43
VPS33B-201ENST00000333371 ABT1Q9ULW3 272 aaKnown RBP12.35□□□□□ -0.43
VPS33B-201ENST00000333371 DMTF1Q9Y222 760 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 NLRC5Q86WI3 1866 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 TDRD15B5MCY1 1934 aaKnown RBP12.35□□□□□ -0.43
VPS33B-201ENST00000333371 LAMA3Q16787 3333 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 A0A1B0GTL3 188 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 AP3B1O00203 1094 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 NR5A2O00482 541 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 AKAP10O43572 662 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 SRP72O76094 671 aaKnown RBP12.35□□□□□ -0.43
VPS33B-201ENST00000333371 IGLV3-25P01717 112 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 PIRTP0C851 137 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 PRSS56P0CW18 603 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 HAPLN1P10915 354 aaPredicted RBP12.35□□□□□ -0.43
VPS33B-201ENST00000333371 CYBAP13498 195 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 PAMP19021 973 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 CDH2P19022 906 aaPredicted RBP12.35□□□□□ -0.43
VPS33B-201ENST00000333371 KDELC1Q6UW63 502 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 LCA5Q86VQ0 697 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 ZNF354CQ86Y25 554 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 TRIML2Q8N7C3 387 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 TRIB2Q92519 343 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 ARHGAP39Q9C0H5 1083 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 OLAHQ9NV23 265 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 OSER1Q9NX31 292 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 RRN3Q9NYV6 651 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 CROTQ9UKG9 612 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 AURKCQ9UQB9 309 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 HS3ST4Q9Y661 456 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 TCRBV3S1A0A5B6 114 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 ARHGAP10A1A4S6 786 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 E9PAM4 449 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 HTRA2O43464 458 aaPredicted RBP12.35□□□□□ -0.43
VPS33B-201ENST00000333371 CLIC3O95833 236 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 CDK4P11802 303 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 APLP1P51693 650 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 NR1H2P55055 460 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 SH3BP2P78314 561 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 GRB7Q14451 532 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 KIF19Q2TAC6 998 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 VPS26BQ4G0F5 336 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 MANEALQ5VSG8 457 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 LARP4Q71RC2 724 aaKnown RBP eCLIP12.35□□□□□ -0.43
VPS33B-201ENST00000333371 ISCA2Q86U28 154 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 UBXN10Q96LJ8 280 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 RANBP9Q96S59 729 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 AKTIPQ9H8T0 292 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 DUS2Q9NX74 493 aaKnown RBP12.35□□□□□ -0.43
VPS33B-201ENST00000333371 TMEM181Q9P2C4 612 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 GABRQQ9UN88 632 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 VWA7Q9Y334 891 aa12.35□□□□□ -0.43
VPS33B-201ENST00000333371 NME4O00746 187 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 GPR182O15218 404 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 CNTN5O94779 1100 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 IGHA2P01877 340 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 CHRNA1P02708 482 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 DNAJB2P25686 324 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 THPOP40225 353 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 HSPA13P48723 471 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 FLT3LGP49771 235 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 SLC5A3P53794 718 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 EIF4EBP2Q13542 120 aaPredicted RBP12.34□□□□□ -0.43
VPS33B-201ENST00000333371 UPP1Q16831 310 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 GEN1Q17RS7 908 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 USP41Q3LFD5 358 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 UNC50Q53HI1 259 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms