RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 ZNF180Q9UJW8 692 aa23.33■■□□□ 1.33
TSEN54-201ENST00000333213 A0A0J9YYE9 177 aa23.33■■□□□ 1.32
TSEN54-201ENST00000333213 A0A1W2PPM1 405 aa23.33■■□□□ 1.32
TSEN54-201ENST00000333213 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.33■■□□□ 1.32
TSEN54-201ENST00000333213 LEFTY1O75610 366 aa23.33■■□□□ 1.32
TSEN54-201ENST00000333213 TRBC1P01850 177 aa23.33■■□□□ 1.32
TSEN54-201ENST00000333213 ASGR2P07307 311 aa23.33■■□□□ 1.32
TSEN54-201ENST00000333213 SEC24CP53992 1094 aa23.33■■□□□ 1.32
TSEN54-201ENST00000333213 EPHB1P54762 984 aa23.33■■□□□ 1.32
TSEN54-201ENST00000333213 SMAD2Q15796 467 aaKnown RBP23.33■■□□□ 1.32
TSEN54-201ENST00000333213 PDPK2PQ6A1A2 396 aa23.33■■□□□ 1.32
TSEN54-201ENST00000333213 GLT6D1Q7Z4J2 308 aa23.33■■□□□ 1.32
TSEN54-201ENST00000333213 TAX1BP1Q86VP1 789 aa23.33■■□□□ 1.32
TSEN54-201ENST00000333213 CSGALNACT1Q8TDX6 532 aa23.33■■□□□ 1.32
TSEN54-201ENST00000333213 CDKL2Q92772 493 aa23.33■■□□□ 1.32
TSEN54-201ENST00000333213 HEPHQ9BQS7 1158 aa23.33■■□□□ 1.32
TSEN54-201ENST00000333213 IL12RB1P42701 662 aa23.32■■□□□ 1.32
TSEN54-201ENST00000333213 RECQLP46063 649 aaPredicted RBP23.32■■□□□ 1.32
TSEN54-201ENST00000333213 ZNF140P52738 457 aaPredicted RBP23.32■■□□□ 1.32
TSEN54-201ENST00000333213 RPL26P61254 145 aaKnown RBP23.32■■□□□ 1.32
TSEN54-201ENST00000333213 TMPRSS15P98073 1019 aa23.32■■□□□ 1.32
TSEN54-201ENST00000333213 PPARDQ03181 441 aa23.32■■□□□ 1.32
TSEN54-201ENST00000333213 TAF1AQ15573 450 aaPredicted RBP23.32■■□□□ 1.32
TSEN54-201ENST00000333213 FNDC3BQ53EP0 1204 aaKnown RBP23.32■■□□□ 1.32
TSEN54-201ENST00000333213 ARSIQ5FYB1 569 aa23.32■■□□□ 1.32
TSEN54-201ENST00000333213 EGFLAMQ63HQ2 1017 aa23.32■■□□□ 1.32
TSEN54-201ENST00000333213 PACS1Q6VY07 963 aa23.32■■□□□ 1.32
TSEN54-201ENST00000333213 TRABD2AQ86V40 505 aa23.32■■□□□ 1.32
TSEN54-201ENST00000333213 TTC30BQ8N4P2 665 aa23.32■■□□□ 1.32
TSEN54-201ENST00000333213 PNPLA1Q8N8W4 532 aa23.32■■□□□ 1.32
TSEN54-201ENST00000333213 KDM1BQ8NB78 822 aa23.32■■□□□ 1.32
TSEN54-201ENST00000333213 TBATAQ96M53 351 aa23.32■■□□□ 1.32
TSEN54-201ENST00000333213 ZNF641Q96N77 438 aaPredicted RBP23.32■■□□□ 1.32
TSEN54-201ENST00000333213 SUDS3Q9H7L9 328 aaPredicted RBP23.32■■□□□ 1.32
TSEN54-201ENST00000333213 RPL26L1Q9UNX3 145 aaKnown RBP23.32■■□□□ 1.32
TSEN54-201ENST00000333213 SLC8A2Q9UPR5 921 aa23.32■■□□□ 1.32
TSEN54-201ENST00000333213 TCF20Q9UGU0 1960 aaKnown RBP23.32■■□□□ 1.32
TSEN54-201ENST00000333213 RAD51Q06609 339 aa23.31■■□□□ 1.32
TSEN54-201ENST00000333213 CDKN3Q16667 212 aa23.31■■□□□ 1.32
TSEN54-201ENST00000333213 HNRNPA1L2Q32P51 320 aaKnown RBP23.31■■□□□ 1.32
TSEN54-201ENST00000333213 C9orf64Q5T6V5 341 aa23.31■■□□□ 1.32
TSEN54-201ENST00000333213 GDPD4Q6W3E5 623 aa23.31■■□□□ 1.32
TSEN54-201ENST00000333213 NLRP9Q7RTR0 991 aa23.31■■□□□ 1.32
TSEN54-201ENST00000333213 SPOCK2Q92563 424 aa23.31■■□□□ 1.32
TSEN54-201ENST00000333213 HDAC10Q969S8 669 aa23.31■■□□□ 1.32
TSEN54-201ENST00000333213 KLHL32Q96NJ5 620 aa23.31■■□□□ 1.32
TSEN54-201ENST00000333213 MAGEE1Q9HCI5 957 aa23.31■■□□□ 1.32
TSEN54-201ENST00000333213 THAP10Q9P2Z0 257 aaPredicted RBP23.31■■□□□ 1.32
TSEN54-201ENST00000333213 IKBKGQ9Y6K9 419 aa23.31■■□□□ 1.32
TSEN54-201ENST00000333213 CAPN7Q9Y6W3 813 aa23.31■■□□□ 1.32
TSEN54-201ENST00000333213 OR51F1A6NGY5 319 aa23.31■■□□□ 1.32
TSEN54-201ENST00000333213 K7EQS6 105 aa23.31■■□□□ 1.32
TSEN54-201ENST00000333213 SLC4A1P02730 911 aa23.31■■□□□ 1.32
TSEN54-201ENST00000333213 CTHP32929 405 aa23.31■■□□□ 1.32
TSEN54-201ENST00000333213 HNF1BP35680 557 aa23.31■■□□□ 1.32
TSEN54-201ENST00000333213 SEMG2Q02383 582 aa23.31■■□□□ 1.32
TSEN54-201ENST00000333213 ACTN3Q08043 901 aaPredicted RBP23.31■■□□□ 1.32
TSEN54-201ENST00000333213 DENND6AQ8IWF6 608 aa23.31■■□□□ 1.32
TSEN54-201ENST00000333213 CNTN4Q8IWV2 1026 aa23.31■■□□□ 1.32
TSEN54-201ENST00000333213 STYXQ8WUJ0 223 aa23.31■■□□□ 1.32
TSEN54-201ENST00000333213 PEX13Q92968 403 aa23.31■■□□□ 1.32
TSEN54-201ENST00000333213 MCMBPQ9BTE3 642 aa23.31■■□□□ 1.32
TSEN54-201ENST00000333213 HEBP1Q9NRV9 189 aa23.31■■□□□ 1.32
TSEN54-201ENST00000333213 STARD13Q9Y3M8 1113 aa23.31■■□□□ 1.32
TSEN54-201ENST00000333213 CRTAMO95727 393 aa23.3■■□□□ 1.32
TSEN54-201ENST00000333213 APODP05090 189 aa23.3■■□□□ 1.32
TSEN54-201ENST00000333213 PSMA3P25788 255 aa23.3■■□□□ 1.32
TSEN54-201ENST00000333213 GABRB3P28472 473 aa23.3■■□□□ 1.32
TSEN54-201ENST00000333213 HNRNPH1P31943 449 aaKnown RBP23.3■■□□□ 1.32
TSEN54-201ENST00000333213 BMPR2Q13873 1038 aa23.3■■□□□ 1.32
TSEN54-201ENST00000333213 GRM3Q14832 879 aa23.3■■□□□ 1.32
TSEN54-201ENST00000333213 LYSMD3Q7Z3D4 306 aa23.3■■□□□ 1.32
TSEN54-201ENST00000333213 SRRM1Q8IYB3 904 aaKnown RBP23.3■■□□□ 1.32
TSEN54-201ENST00000333213 PLCD3Q8N3E9 789 aa23.3■■□□□ 1.32
TSEN54-201ENST00000333213 OR4K2Q8NGD2 314 aa23.3■■□□□ 1.32
TSEN54-201ENST00000333213 P2RY13Q9BPV8 354 aa23.3■■□□□ 1.32
TSEN54-201ENST00000333213 TRPV5Q9NQA5 729 aa23.3■■□□□ 1.32
TSEN54-201ENST00000333213 IL36AQ9UHA7 158 aa23.3■■□□□ 1.32
TSEN54-201ENST00000333213 SARDHQ9UL12 918 aa23.3■■□□□ 1.32
TSEN54-201ENST00000333213 RIMKLBQ9ULI2 386 aa23.3■■□□□ 1.32
TSEN54-201ENST00000333213 PPIL1Q9Y3C6 166 aa23.3■■□□□ 1.32
TSEN54-201ENST00000333213 ZNF711Q9Y462 761 aa23.3■■□□□ 1.32
TSEN54-201ENST00000333213 SPECC1L-ADORA2AF8WAN1 911 aa23.29■■□□□ 1.32
TSEN54-201ENST00000333213 SIN3BO75182 1162 aa23.29■■□□□ 1.32
TSEN54-201ENST00000333213 KRT15P19012 456 aa23.29■■□□□ 1.32
TSEN54-201ENST00000333213 PAMP19021 973 aa23.29■■□□□ 1.32
TSEN54-201ENST00000333213 CTBP1Q13363 440 aa23.29■■□□□ 1.32
TSEN54-201ENST00000333213 NAB1Q13506 487 aa23.29■■□□□ 1.32
TSEN54-201ENST00000333213 LEXMQ3ZCV2 418 aa23.29■■□□□ 1.32
TSEN54-201ENST00000333213 SERPINA13PQ6UXR4 307 aa23.29■■□□□ 1.32
TSEN54-201ENST00000333213 STK40Q8N2I9 435 aa23.29■■□□□ 1.32
TSEN54-201ENST00000333213 CDKN2AIPNLQ96HQ2 116 aa23.29■■□□□ 1.32
TSEN54-201ENST00000333213 CABS1Q96KC9 395 aa23.29■■□□□ 1.32
TSEN54-201ENST00000333213 NLE1Q9NVX2 485 aaPredicted RBP23.29■■□□□ 1.32
TSEN54-201ENST00000333213 CACNA2D2Q9NY47 1150 aa23.29■■□□□ 1.32
TSEN54-201ENST00000333213 PHTF1Q9UMS5 762 aa23.29■■□□□ 1.32
TSEN54-201ENST00000333213 MYO10Q9HD67 2058 aa23.29■■□□□ 1.32
TSEN54-201ENST00000333213 NPIPB15A6NHN6 443 aaPredicted RBP23.29■■□□□ 1.32
TSEN54-201ENST00000333213 A8MX80 341 aa23.29■■□□□ 1.32
TSEN54-201ENST00000333213 NARSO43776 548 aaKnown RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms