RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 PPTC7Q8NI37 304 aa23.68■■□□□ 1.38
TSKU-201ENST00000333090 ANKRD49Q8WVL7 239 aa23.68■■□□□ 1.38
TSKU-201ENST00000333090 SGIP1Q9BQI5 828 aa23.68■■□□□ 1.38
TSKU-201ENST00000333090 C9orf16Q9BUW7 83 aa23.68■■□□□ 1.38
TSKU-201ENST00000333090 NAA50Q9GZZ1 169 aaKnown RBP23.68■■□□□ 1.38
TSKU-201ENST00000333090 PTGDR2Q9Y5Y4 395 aa23.68■■□□□ 1.38
TSKU-201ENST00000333090 TANC1Q9C0D5 1861 aa23.68■■□□□ 1.38
TSKU-201ENST00000333090 AQP12BA6NM10 295 aa23.68■■□□□ 1.38
TSKU-201ENST00000333090 CACNG3O60359 315 aa23.68■■□□□ 1.38
TSKU-201ENST00000333090 RBP1P09455 135 aa23.68■■□□□ 1.38
TSKU-201ENST00000333090 CD97P48960 835 aa23.68■■□□□ 1.38
TSKU-201ENST00000333090 CDH13P55290 713 aa23.68■■□□□ 1.38
TSKU-201ENST00000333090 YBX1P67809 324 aaKnown RBP23.68■■□□□ 1.38
TSKU-201ENST00000333090 AARS2Q5JTZ9 985 aaKnown RBP23.68■■□□□ 1.38
TSKU-201ENST00000333090 KIAA0319Q5VV43 1072 aa23.68■■□□□ 1.38
TSKU-201ENST00000333090 ZBTB46Q86UZ6 589 aa23.68■■□□□ 1.38
TSKU-201ENST00000333090 AQP12AQ8IXF9 295 aa23.68■■□□□ 1.38
TSKU-201ENST00000333090 SLC15A3Q8IY34 581 aa23.68■■□□□ 1.38
TSKU-201ENST00000333090 ATPAF2Q8N5M1 289 aa23.68■■□□□ 1.38
TSKU-201ENST00000333090 ZBTB8BQ8NAP8 495 aaPredicted RBP23.68■■□□□ 1.38
TSKU-201ENST00000333090 SIK2Q9H0K1 926 aa23.68■■□□□ 1.38
TSKU-201ENST00000333090 ALG9Q9H6U8 611 aa23.68■■□□□ 1.38
TSKU-201ENST00000333090 AKTIPQ9H8T0 292 aa23.68■■□□□ 1.38
TSKU-201ENST00000333090 GLOD4Q9HC38 313 aa23.68■■□□□ 1.38
TSKU-201ENST00000333090 TREX1Q9NSU2 369 aa23.68■■□□□ 1.38
TSKU-201ENST00000333090 CHRM3P20309 590 aa23.68■■□□□ 1.38
TSKU-201ENST00000333090 CD247P20963 164 aa23.68■■□□□ 1.38
TSKU-201ENST00000333090 WARSP23381 471 aaKnown RBP23.68■■□□□ 1.38
TSKU-201ENST00000333090 ATP6V0D1P61421 351 aa23.68■■□□□ 1.38
TSKU-201ENST00000333090 NOMO2Q5JPE7 1267 aa23.68■■□□□ 1.38
TSKU-201ENST00000333090 FCRL5Q96RD9 977 aa23.68■■□□□ 1.38
TSKU-201ENST00000333090 GPATCH1Q9BRR8 931 aaKnown RBP23.68■■□□□ 1.38
TSKU-201ENST00000333090 ADAMTS10Q9H324 1103 aa23.68■■□□□ 1.38
TSKU-201ENST00000333090 PPP2R3BQ9Y5P8 575 aa23.68■■□□□ 1.38
TSKU-201ENST00000333090 EI24O14681 340 aa23.67■■□□□ 1.38
TSKU-201ENST00000333090 CBFA2T3O75081 653 aa23.67■■□□□ 1.38
TSKU-201ENST00000333090 IGFBP6P24592 240 aaPredicted RBP23.67■■□□□ 1.38
TSKU-201ENST00000333090 SOX11P35716 441 aa23.67■■□□□ 1.38
TSKU-201ENST00000333090 CCR3P51677 355 aa23.67■■□□□ 1.38
TSKU-201ENST00000333090 GEN1Q17RS7 908 aa23.67■■□□□ 1.38
TSKU-201ENST00000333090 CHST15Q7LFX5 561 aaPredicted RBP23.67■■□□□ 1.38
TSKU-201ENST00000333090 LIMS2Q7Z4I7 341 aa23.67■■□□□ 1.38
TSKU-201ENST00000333090 FAM35AQ86V20 835 aa23.67■■□□□ 1.38
TSKU-201ENST00000333090 RNF168Q8IYW5 571 aaPredicted RBP23.67■■□□□ 1.38
TSKU-201ENST00000333090 SEPT8Q92599 483 aa23.67■■□□□ 1.38
TSKU-201ENST00000333090 EXT2Q93063 718 aa23.67■■□□□ 1.38
TSKU-201ENST00000333090 BORCS5Q969J3 196 aa23.67■■□□□ 1.38
TSKU-201ENST00000333090 CENPNQ96H22 339 aaPredicted RBP23.67■■□□□ 1.38
TSKU-201ENST00000333090 FADS3Q9Y5Q0 445 aa23.67■■□□□ 1.38
TSKU-201ENST00000333090 ANGPT2O15123 496 aa23.67■■□□□ 1.38
TSKU-201ENST00000333090 KIAA0930Q6ICG6 404 aaPredicted RBP23.67■■□□□ 1.38
TSKU-201ENST00000333090 SLC22A9Q8IVM8 553 aa23.67■■□□□ 1.38
TSKU-201ENST00000333090 HDAC10Q969S8 669 aa23.67■■□□□ 1.38
TSKU-201ENST00000333090 RPL10LQ96L21 214 aaKnown RBP23.67■■□□□ 1.38
TSKU-201ENST00000333090 SOX17Q9H6I2 414 aaPredicted RBP23.67■■□□□ 1.38
TSKU-201ENST00000333090 TMEM165Q9HC07 324 aa23.67■■□□□ 1.38
TSKU-201ENST00000333090 SLC38A7Q9NVC3 462 aa23.67■■□□□ 1.38
TSKU-201ENST00000333090 TBC1D13Q9NVG8 400 aa23.67■■□□□ 1.38
TSKU-201ENST00000333090 DOLKQ9UPQ8 538 aa23.67■■□□□ 1.38
TSKU-201ENST00000333090 PIN4Q9Y237 131 aaKnown RBP23.67■■□□□ 1.38
TSKU-201ENST00000333090 RALGAPA2Q2PPJ7 1873 aa23.66■■□□□ 1.38
TSKU-201ENST00000333090 CAPN3P20807 821 aa23.66■■□□□ 1.38
TSKU-201ENST00000333090 YAP1P46937 504 aaKnown RBP23.66■■□□□ 1.38
TSKU-201ENST00000333090 CCT8P50990 548 aa23.66■■□□□ 1.38
TSKU-201ENST00000333090 NEDD8Q15843 81 aa23.66■■□□□ 1.38
TSKU-201ENST00000333090 ZNF829Q3KNS6 432 aaPredicted RBP23.66■■□□□ 1.38
TSKU-201ENST00000333090 ABRAXAS1Q6UWZ7 409 aa23.66■■□□□ 1.38
TSKU-201ENST00000333090 TBC1D15Q8TC07 691 aa23.66■■□□□ 1.38
TSKU-201ENST00000333090 SLC45A3Q96JT2 553 aa23.66■■□□□ 1.38
TSKU-201ENST00000333090 TSGA13Q96PP4 275 aa23.66■■□□□ 1.38
TSKU-201ENST00000333090 HOPXQ9BPY8 73 aaPredicted RBP23.66■■□□□ 1.38
TSKU-201ENST00000333090 TMEM30AQ9NV96 361 aa23.66■■□□□ 1.38
TSKU-201ENST00000333090 ABCD2Q9UBJ2 740 aa23.66■■□□□ 1.38
TSKU-201ENST00000333090 DSEQ9UL01 958 aa23.66■■□□□ 1.38
TSKU-201ENST00000333090 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.66■■□□□ 1.38
TSKU-201ENST00000333090 ASB14A6NK59 587 aa23.66■■□□□ 1.38
TSKU-201ENST00000333090 BBIP1A8MTZ0 92 aa23.66■■□□□ 1.38
TSKU-201ENST00000333090 XPOTO43592 962 aaKnown RBP23.66■■□□□ 1.38
TSKU-201ENST00000333090 IMPDH1P20839 514 aa23.66■■□□□ 1.38
TSKU-201ENST00000333090 ADCYAP1R1P41586 468 aa23.66■■□□□ 1.38
TSKU-201ENST00000333090 KCNC1P48547 511 aa23.66■■□□□ 1.38
TSKU-201ENST00000333090 C21orf59P57076 290 aa23.66■■□□□ 1.38
TSKU-201ENST00000333090 GALNT1Q10472 559 aaPredicted RBP23.66■■□□□ 1.38
TSKU-201ENST00000333090 BNIP3Q12983 259 aa23.66■■□□□ 1.38
TSKU-201ENST00000333090 ATP6AP1Q15904 470 aa23.66■■□□□ 1.38
TSKU-201ENST00000333090 PCSK7Q16549 785 aa23.66■■□□□ 1.38
TSKU-201ENST00000333090 TAPT1Q6NXT6 567 aa23.66■■□□□ 1.38
TSKU-201ENST00000333090 KCTD8Q6ZWB6 473 aa23.66■■□□□ 1.38
TSKU-201ENST00000333090 IFNEQ86WN2 208 aa23.66■■□□□ 1.38
TSKU-201ENST00000333090 ZNF420Q8TAQ5 688 aaPredicted RBP23.66■■□□□ 1.38
TSKU-201ENST00000333090 VPS50Q96JG6 964 aa23.66■■□□□ 1.38
TSKU-201ENST00000333090 COX4I2Q96KJ9 171 aa23.66■■□□□ 1.38
TSKU-201ENST00000333090 SMOQ99835 787 aa23.66■■□□□ 1.38
TSKU-201ENST00000333090 CMTM6Q9NX76 183 aa23.66■■□□□ 1.38
TSKU-201ENST00000333090 TRIM64A6NGJ6 449 aa23.65■■□□□ 1.38
TSKU-201ENST00000333090 DCKP27707 260 aa23.65■■□□□ 1.38
TSKU-201ENST00000333090 ATP4BP51164 291 aa23.65■■□□□ 1.38
TSKU-201ENST00000333090 MAPK10P53779 464 aa23.65■■□□□ 1.38
TSKU-201ENST00000333090 ACAP2Q15057 778 aa23.65■■□□□ 1.38
TSKU-201ENST00000333090 CYP51A1Q16850 503 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms