RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 ACOX1Q15067 660 aa15.94■□□□□ 0.14
CCDC28A-201ENST00000332797 CCNG2Q16589 344 aa15.94■□□□□ 0.14
CCDC28A-201ENST00000332797 QPCTQ16769 361 aa15.94■□□□□ 0.14
CCDC28A-201ENST00000332797 KDELC1Q6UW63 502 aa15.94■□□□□ 0.14
CCDC28A-201ENST00000332797 GCNT7Q6ZNI0 430 aa15.94■□□□□ 0.14
CCDC28A-201ENST00000332797 RASGEF1CQ8N431 466 aa15.94■□□□□ 0.14
CCDC28A-201ENST00000332797 IPMKQ8NFU5 416 aa15.94■□□□□ 0.14
CCDC28A-201ENST00000332797 COG1Q8WTW3 980 aa15.94■□□□□ 0.14
CCDC28A-201ENST00000332797 SKA1Q96BD8 255 aa15.94■□□□□ 0.14
CCDC28A-201ENST00000332797 LENG8Q96PV6 779 aaPredicted RBP15.94■□□□□ 0.14
CCDC28A-201ENST00000332797 GORASP1Q9BQQ3 440 aa15.94■□□□□ 0.14
CCDC28A-201ENST00000332797 KCND1Q9NSA2 647 aa15.94■□□□□ 0.14
CCDC28A-201ENST00000332797 ZKSCAN5Q9Y2L8 839 aa15.94■□□□□ 0.14
CCDC28A-201ENST00000332797 ADAMTS9Q9P2N4 1935 aa15.94■□□□□ 0.14
CCDC28A-201ENST00000332797 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.93■□□□□ 0.14
CCDC28A-201ENST00000332797 ANKRD66B4E2M5 251 aa15.93■□□□□ 0.14
CCDC28A-201ENST00000332797 FPGTO14772 594 aa15.93■□□□□ 0.14
CCDC28A-201ENST00000332797 GEMP55040 296 aa15.93■□□□□ 0.14
CCDC28A-201ENST00000332797 MPP3Q13368 585 aa15.93■□□□□ 0.14
CCDC28A-201ENST00000332797 PRPSAP1Q14558 356 aa15.93■□□□□ 0.14
CCDC28A-201ENST00000332797 KIF19Q2TAC6 998 aa15.93■□□□□ 0.14
CCDC28A-201ENST00000332797 LRRC66Q68CR7 880 aa15.93■□□□□ 0.14
CCDC28A-201ENST00000332797 CCDC70Q6NSX1 233 aa15.93■□□□□ 0.14
CCDC28A-201ENST00000332797 CRTC1Q6UUV9 634 aa15.93■□□□□ 0.14
CCDC28A-201ENST00000332797 PTAR1Q7Z6K3 402 aaPredicted RBP15.93■□□□□ 0.14
CCDC28A-201ENST00000332797 MFSD2AQ8NA29 543 aa15.93■□□□□ 0.14
CCDC28A-201ENST00000332797 TP53I13Q8NBR0 393 aaPredicted RBP15.93■□□□□ 0.14
CCDC28A-201ENST00000332797 DENND6BQ8NEG7 585 aa15.93■□□□□ 0.14
CCDC28A-201ENST00000332797 OR2I1PQ8NGU4 316 aa15.93■□□□□ 0.14
CCDC28A-201ENST00000332797 MRGPRX2Q96LB1 330 aa15.93■□□□□ 0.14
CCDC28A-201ENST00000332797 KLF6Q99612 283 aaPredicted RBP15.93■□□□□ 0.14
CCDC28A-201ENST00000332797 NAPGQ99747 312 aaPredicted RBP15.93■□□□□ 0.14
CCDC28A-201ENST00000332797 MLPHQ9BV36 600 aaPredicted RBP15.93■□□□□ 0.14
CCDC28A-201ENST00000332797 FSD1LQ9BXM9 530 aa15.93■□□□□ 0.14
CCDC28A-201ENST00000332797 ZDHHC5Q9C0B5 715 aa15.93■□□□□ 0.14
CCDC28A-201ENST00000332797 SMARCAL1Q9NZC9 954 aa15.93■□□□□ 0.14
CCDC28A-201ENST00000332797 SNX11Q9Y5W9 270 aa15.93■□□□□ 0.14
CCDC28A-201ENST00000332797 LRRK1Q38SD2 2015 aa15.93■□□□□ 0.14
CCDC28A-201ENST00000332797 POM121BA6NF01 834 aa15.92■□□□□ 0.14
CCDC28A-201ENST00000332797 A6NNZ2 444 aa15.92■□□□□ 0.14
CCDC28A-201ENST00000332797 TLR4O00206 839 aa15.92■□□□□ 0.14
CCDC28A-201ENST00000332797 PGRMC1O00264 195 aaKnown RBP15.92■□□□□ 0.14
CCDC28A-201ENST00000332797 GCATO75600 419 aa15.92■□□□□ 0.14
CCDC28A-201ENST00000332797 ANXA9O76027 345 aa15.92■□□□□ 0.14
CCDC28A-201ENST00000332797 RECQL5O94762 991 aaPredicted RBP15.92■□□□□ 0.14
CCDC28A-201ENST00000332797 NDST3O95803 873 aa15.92■□□□□ 0.14
CCDC28A-201ENST00000332797 IFNB1P01574 187 aa15.92■□□□□ 0.14
CCDC28A-201ENST00000332797 THEGLP0DJG4 465 aa15.92■□□□□ 0.14
CCDC28A-201ENST00000332797 STIP1P31948 543 aaKnown RBP15.92■□□□□ 0.14
CCDC28A-201ENST00000332797 IGFALSP35858 605 aa15.92■□□□□ 0.14
CCDC28A-201ENST00000332797 PI4KAP42356 2102 aa15.92■□□□□ 0.14
CCDC28A-201ENST00000332797 LRRC14Q15048 493 aa15.92■□□□□ 0.14
CCDC28A-201ENST00000332797 IRF4Q15306 451 aa15.92■□□□□ 0.14
CCDC28A-201ENST00000332797 HSD11B1LQ7Z5J1 315 aa15.92■□□□□ 0.14
CCDC28A-201ENST00000332797 IQCHQ86VS3 1027 aa15.92■□□□□ 0.14
CCDC28A-201ENST00000332797 TAB3Q8N5C8 712 aaPredicted RBP15.92■□□□□ 0.14
CCDC28A-201ENST00000332797 MINDY1Q8N5J2 469 aa15.92■□□□□ 0.14
CCDC28A-201ENST00000332797 OR13H1Q8NG92 308 aa15.92■□□□□ 0.14
CCDC28A-201ENST00000332797 CENPTQ96BT3 561 aa15.92■□□□□ 0.14
CCDC28A-201ENST00000332797 RTP4Q96DX8 246 aa15.92■□□□□ 0.14
CCDC28A-201ENST00000332797 KLHDC7BQ96G42 594 aa15.92■□□□□ 0.14
CCDC28A-201ENST00000332797 NAP1L3Q99457 506 aaPredicted RBP15.92■□□□□ 0.14
CCDC28A-201ENST00000332797 TMEM9BQ9NQ34 198 aa15.92■□□□□ 0.14
CCDC28A-201ENST00000332797 MBNL1Q9NR56 388 aaKnown RBP15.92■□□□□ 0.14
CCDC28A-201ENST00000332797 TTC7AQ9ULT0 858 aaPredicted RBP15.92■□□□□ 0.14
CCDC28A-201ENST00000332797 HS3ST3A1Q9Y663 406 aa15.92■□□□□ 0.14
CCDC28A-201ENST00000332797 C1orf232A0A0U1RR37 186 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 CTAGE9A4FU28 777 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 CES2O00748 559 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 ZNF185O15231 689 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 ITGAVP06756 1048 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 PIRTP0C851 137 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 ZNF30P17039 623 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 GM2AP17900 193 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 TCP1P17987 556 aaKnown RBP15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 ETV3P41162 512 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 CTSKP43235 329 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 NXPH1P58417 271 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 WSCD2Q2TBF2 565 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 P3H1Q32P28 736 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 KYAT3Q6YP21 454 aaKnown RBP15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 KDM7AQ6ZMT4 941 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 ABI3BPQ7Z7G0 1075 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 SLC25A41Q8N5S1 370 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 PRELID2Q8N945 189 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 BMFQ96LC9 184 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 COQ10AQ96MF6 247 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 PPP1R2P1Q96PQ5 205 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 FICDQ9BVA6 458 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 AP1M1Q9BXS5 423 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 HOMER3Q9NSC5 361 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 AAR2Q9Y312 384 aaKnown RBP15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 LOC285095A0A1B0GVY8 99 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 C4orf47A7E2U8 309 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 PSMD11O00231 422 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 MAGEC1O60732 1142 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 CLDN7O95471 211 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 METTL18O95568 372 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 CER1O95813 267 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 PCCBP05166 539 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms