RNA–Protein interactions for RNA: ENST00000332512.7

RIPK4-201, Transcript of receptor interacting serine/threonine kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK4, Length 3,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4-201ENST00000332512 CEP97Q8IW35 865 aa13.55□□□□□ -0.24
RIPK4-201ENST00000332512 CLYBLQ8N0X4 340 aa13.55□□□□□ -0.24
RIPK4-201ENST00000332512 ZNF276Q8N554 614 aa13.55□□□□□ -0.24
RIPK4-201ENST00000332512 ATG16L2Q8NAA4 619 aa13.55□□□□□ -0.24
RIPK4-201ENST00000332512 SLC39A8Q9C0K1 460 aa13.55□□□□□ -0.24
RIPK4-201ENST00000332512 NUMA1Q14980 2115 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 A0A1W2PPW3 197 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 HMX2A2RU54 273 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 DEAF1O75398 565 aaPredicted RBP13.54□□□□□ -0.24
RIPK4-201ENST00000332512 CPSF4O95639 269 aaKnown RBP13.54□□□□□ -0.24
RIPK4-201ENST00000332512 RAD23AP54725 363 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 XIAPP98170 497 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 GALNT5Q7Z7M9 940 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 CENPLQ8N0S6 344 aaPredicted RBP13.54□□□□□ -0.24
RIPK4-201ENST00000332512 OR2T34Q8NGX1 318 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 OR2T3Q8NH03 318 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 DNAJC5Q9H3Z4 198 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 OCEL1Q9H607 264 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 URB1O60287 2271 aaKnown RBP13.54□□□□□ -0.24
RIPK4-201ENST00000332512 TYW5A2RUC4 315 aaKnown RBP13.54□□□□□ -0.24
RIPK4-201ENST00000332512 ASLP04424 464 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 DARSP14868 501 aaKnown RBP13.54□□□□□ -0.24
RIPK4-201ENST00000332512 MADCAM1Q13477 382 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 GLB1LQ6UWU2 654 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 LRRC8DQ7L1W4 858 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 GLT6D1Q7Z4J2 308 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 P3H2Q8IVL5 708 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 ZCCHC7Q8N3Z6 543 aaKnown RBP13.54□□□□□ -0.24
RIPK4-201ENST00000332512 NPWQ8N729 165 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 TNIP2Q8NFZ5 429 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 TWIST2Q8WVJ9 160 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 ADI1Q9BV57 179 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 ASPSCR1Q9BZE9 553 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 ABHD16BQ9H3Z7 469 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 TRNAU1APQ9NX07 287 aaKnown RBP13.54□□□□□ -0.24
RIPK4-201ENST00000332512 MYO7AQ13402 2215 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 DDX60Q8IY21 1712 aaKnown RBP13.54□□□□□ -0.24
RIPK4-201ENST00000332512 C2orf81A6NN90 581 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 MEIS3P2A8K0S8 358 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 RGS5O15539 181 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 LRATO95237 230 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 POU1F1P28069 291 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 DAOAP59103 153 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 ABRAXAS1Q6UWZ7 409 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 TM6SF2Q9BZW4 377 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 SPON1Q9HCB6 807 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 NMRK2Q9NPI5 230 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 KLQ9UEF7 1012 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 TMCO1Q9UM00 188 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 ATP11BQ9Y2G3 1177 aa13.54□□□□□ -0.24
RIPK4-201ENST00000332512 A0A087X1B8 175 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 ZSCAN9O15535 394 aaPredicted RBP13.53□□□□□ -0.24
RIPK4-201ENST00000332512 MGEA5O60502 916 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 SEC22BO75396 215 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 ATG7O95352 703 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 MTPNP58546 118 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 CDKL1Q00532 357 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 MAP3K10Q02779 954 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 ITGA7Q13683 1181 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 FAM98BQ52LJ0 330 aaKnown RBP13.53□□□□□ -0.24
RIPK4-201ENST00000332512 TMEM26Q6ZUK4 368 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 SNX27Q96L92 541 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 SMAD5Q99717 465 aaKnown RBP13.53□□□□□ -0.24
RIPK4-201ENST00000332512 TINF2Q9BSI4 451 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 PRKD2Q9BZL6 878 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 AGO3Q9H9G7 860 aaKnown RBP13.53□□□□□ -0.24
RIPK4-201ENST00000332512 CNGB3Q9NQW8 809 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 IGSF9Q9P2J2 1179 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 CNOT6Q9ULM6 557 aaKnown RBP13.53□□□□□ -0.24
RIPK4-201ENST00000332512 ST3GAL5Q9UNP4 418 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 USP54Q70EL1 1684 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 CROCCQ5TZA2 2017 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 NTRK1P04629 796 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 CD1EP15812 388 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 AKT1P31749 480 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 SEMG2Q02383 582 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 SIM2Q14190 667 aaPredicted RBP13.53□□□□□ -0.24
RIPK4-201ENST00000332512 AP5B1Q2VPB7 878 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 CES4AQ5XG92 561 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 LGI2Q8N0V4 545 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 CNTD1Q8N815 330 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 ATAD1Q8NBU5 361 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 GRIN3AQ8TCU5 1115 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 C6orf62Q9GZU0 229 aaPredicted RBP13.53□□□□□ -0.24
RIPK4-201ENST00000332512 ZBTB26Q9HCK0 441 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 DNAJB4Q9UDY4 337 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 CFAP99D6REC4 459 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 NOBOXO60393 691 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 ABCB1P08183 1280 aaPredicted RBP13.53□□□□□ -0.24
RIPK4-201ENST00000332512 XPAP23025 273 aaPredicted RBP13.53□□□□□ -0.24
RIPK4-201ENST00000332512 CDC42EP1Q00587 391 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 LIPEQ05469 1076 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 GALNT18Q6P9A2 607 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 PLEKHH3Q7Z736 793 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 TRIM74Q86UV6 250 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 TRIM73Q86UV7 250 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 HORMAD1Q86X24 394 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 ARNTL2Q8WYA1 636 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 PSMG2Q969U7 264 aa13.53□□□□□ -0.24
RIPK4-201ENST00000332512 FAM120BQ96EK7 910 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms