RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 ASB7Q9H672 318 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 AS3MTQ9HBK9 375 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 LRRC4Q9HBW1 653 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 USP22Q9UPT9 525 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 BTRCQ9Y297 605 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 DLGAP1O14490 977 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 BPNT1O95861 308 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 BCL10O95999 233 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 CYP2B6P20813 491 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 TKTP29401 623 aaKnown RBP7.91□□□□□ -1.14
VMA21-201ENST00000330374 ICAM3P32942 547 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 TPD52P55327 224 aaPredicted RBP7.91□□□□□ -1.14
VMA21-201ENST00000330374 TNFAIP2Q03169 654 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 ARHGAP36Q6ZRI8 547 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 BTLAQ7Z6A9 289 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 TNIP2Q8NFZ5 429 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 FAM49AQ9H0Q0 323 aaPredicted RBP7.91□□□□□ -1.14
VMA21-201ENST00000330374 ALG9Q9H6U8 611 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 RMI1Q9H9A7 625 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 MRPL40Q9NQ50 206 aaKnown RBP7.91□□□□□ -1.14
VMA21-201ENST00000330374 CASS4Q9NQ75 786 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 CACNG4Q9UBN1 327 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 EVLQ9UI08 416 aaPredicted RBP7.91□□□□□ -1.14
VMA21-201ENST00000330374 DAPK2Q9UIK4 370 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 A0A0J9YYE9 177 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 LRRC14BA6NHZ5 514 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 H3BMM5 538 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 ANGPT2O15123 496 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 HUS1O60921 280 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 EEF1DP29692 281 aaKnown RBP7.91□□□□□ -1.14
VMA21-201ENST00000330374 POLR2IP36954 125 aaKnown RBP7.91□□□□□ -1.14
VMA21-201ENST00000330374 OXCT1P55809 520 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 TNFAIP1Q13829 316 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 INPP5AQ14642 412 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 SLC25A52Q3SY17 297 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 CCDC157Q569K6 752 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 RABL3Q5HYI8 236 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 ANKRD26P1Q6NSI1 321 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 SCIMPQ6UWF3 145 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 CATSPERGQ6ZRH7 1159 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 KRT27Q7Z3Y8 459 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 PIWIL3Q7Z3Z3 882 aaKnown RBP7.91□□□□□ -1.14
VMA21-201ENST00000330374 JAZF1Q86VZ6 243 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 ALDH16A1Q8IZ83 802 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 AFAP1L2Q8N4X5 818 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 GABPB2Q8TAK5 448 aaPredicted RBP7.91□□□□□ -1.14
VMA21-201ENST00000330374 CENPIQ92674 756 aaPredicted RBP7.91□□□□□ -1.14
VMA21-201ENST00000330374 ISL2Q96A47 359 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 VPS33AQ96AX1 596 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 PPP1R14BQ96C90 147 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 LTB4R2Q9NPC1 389 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 HOXC10Q9NYD6 342 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 UTP6Q9NYH9 597 aaKnown RBP7.91□□□□□ -1.14
VMA21-201ENST00000330374 IPO11Q9UI26 975 aaKnown RBP7.91□□□□□ -1.14
VMA21-201ENST00000330374 ANKRD6Q9Y2G4 727 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 MAGED1Q9Y5V3 778 aaPredicted RBP7.91□□□□□ -1.14
VMA21-201ENST00000330374 BAIAP3O94812 1187 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 ZNF286BP0CG31 522 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 LSM3P62310 102 aaKnown RBP7.91□□□□□ -1.14
VMA21-201ENST00000330374 TNK2Q07912 1038 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 CDH17Q12864 832 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 PPP1R8Q12972 351 aaKnown RBP7.91□□□□□ -1.14
VMA21-201ENST00000330374 MAPK11Q15759 364 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 IMPG1Q17R60 797 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 RGS21Q2M5E4 152 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 TMEM214Q6NUQ4 689 aaKnown RBP7.91□□□□□ -1.14
VMA21-201ENST00000330374 TMEM53Q6P2H8 277 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 ABRAXAS1Q6UWZ7 409 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 PIWIL4Q7Z3Z4 852 aaKnown RBP7.91□□□□□ -1.14
VMA21-201ENST00000330374 RDH11Q8TC12 318 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 TANKQ92844 425 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 PMM1Q92871 262 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 DCBLD2Q96PD2 775 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 DEPDC7Q96QD5 511 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 KCNK17Q96T54 332 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 GID8Q9NWU2 228 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 DDIT4Q9NX09 232 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.91□□□□□ -1.14
VMA21-201ENST00000330374 TRAF6Q9Y4K3 522 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 A8MT66 165 aa7.9□□□□□ -1.14
VMA21-201ENST00000330374 A8MU76 341 aa7.9□□□□□ -1.14
VMA21-201ENST00000330374 ZBTB7AO95365 584 aa7.9□□□□□ -1.14
VMA21-201ENST00000330374 TXNP10599 105 aaKnown RBP7.9□□□□□ -1.14
VMA21-201ENST00000330374 CCNA2P20248 432 aa7.9□□□□□ -1.14
VMA21-201ENST00000330374 ATP5F1P24539 256 aaPredicted RBP7.9□□□□□ -1.14
VMA21-201ENST00000330374 ADSLP30566 484 aaPredicted RBP7.9□□□□□ -1.14
VMA21-201ENST00000330374 HOXD12P35452 270 aa7.9□□□□□ -1.14
VMA21-201ENST00000330374 MAP3K7CLP57077 242 aa7.9□□□□□ -1.14
VMA21-201ENST00000330374 CBLBQ13191 982 aa7.9□□□□□ -1.14
VMA21-201ENST00000330374 PDCD4Q53EL6 469 aaKnown RBP7.9□□□□□ -1.14
VMA21-201ENST00000330374 DMRTB1Q96MA1 342 aa7.9□□□□□ -1.14
VMA21-201ENST00000330374 TMEM74Q96NL1 305 aa7.9□□□□□ -1.14
VMA21-201ENST00000330374 KCNA7Q96RP8 456 aa7.9□□□□□ -1.14
VMA21-201ENST00000330374 HEPHQ9BQS7 1158 aa7.9□□□□□ -1.14
VMA21-201ENST00000330374 CCDC90BQ9GZT6 254 aa7.9□□□□□ -1.14
VMA21-201ENST00000330374 GPRC5DQ9NZD1 345 aa7.9□□□□□ -1.14
VMA21-201ENST00000330374 PKD2L2Q9NZM6 624 aa7.9□□□□□ -1.14
VMA21-201ENST00000330374 IFT80Q9P2H3 777 aaPredicted RBP7.9□□□□□ -1.14
VMA21-201ENST00000330374 CD300AQ9UGN4 299 aa7.9□□□□□ -1.14
VMA21-201ENST00000330374 SLC27A5Q9Y2P5 690 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms