RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 RPP40O75818 363 aaKnown RBP14.6□□□□□ -0.07
TPM3-206ENST00000330188 GLP2RO95838 553 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 EPOP01588 193 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 HSPA1AP0DMV8 641 aaKnown RBP14.6□□□□□ -0.07
TPM3-206ENST00000330188 HSPA1BP0DMV9 641 aaKnown RBP14.6□□□□□ -0.07
TPM3-206ENST00000330188 IMPDH1P20839 514 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 DPP6P42658 865 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 C1QTNF8P60827 252 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 MTA1Q13330 715 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 LPCAT4Q643R3 524 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 TAS1R1Q7RTX1 841 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 TMEM173Q86WV6 379 aaPredicted RBP14.6□□□□□ -0.07
TPM3-206ENST00000330188 PDSS2Q86YH6 399 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 AFAP1L2Q8N4X5 818 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 OR52K2Q8NGK3 314 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 OR13C4Q8NGS5 318 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 BRSK1Q8TDC3 778 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 PTERQ96BW5 349 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 HHIPL1Q96JK4 782 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 TTLL2Q9BWV7 592 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 ZDHHC7Q9NXF8 308 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 DLGAP2Q9P1A6 1054 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 H7C4K7 107 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 CD3EAPO15446 510 aaKnown RBP14.59□□□□□ -0.07
TPM3-206ENST00000330188 ACSL4O60488 711 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 UPP2O95045 317 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 SLC4A1P02730 911 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 PIRTP0C851 137 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 ENO3P13929 434 aaPredicted RBP14.59□□□□□ -0.07
TPM3-206ENST00000330188 ARSAP15289 507 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 XRCC1P18887 633 aaPredicted RBP14.59□□□□□ -0.07
TPM3-206ENST00000330188 PAX7P23759 505 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 INHBCP55103 352 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 LAMB3Q13751 1172 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 RFTN1Q14699 578 aaPredicted RBP14.59□□□□□ -0.07
TPM3-206ENST00000330188 PRSS55Q6UWB4 352 aaPredicted RBP14.59□□□□□ -0.07
TPM3-206ENST00000330188 OR7D4Q8NG98 312 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 C2orf15Q8WU43 125 aaKnown RBP14.59□□□□□ -0.07
TPM3-206ENST00000330188 L3HYPDHQ96EM0 354 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 NR1H4Q96RI1 486 aaPredicted RBP14.59□□□□□ -0.07
TPM3-206ENST00000330188 TRIB3Q96RU7 358 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 MGME1Q9BQP7 344 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 WDR41Q9HAD4 459 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 EFCAB1Q9HAE3 211 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 MAGEA13PA6NCF6 341 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 UBFD1O14562 309 aaKnown RBP14.59□□□□□ -0.07
TPM3-206ENST00000330188 CASQ2O14958 399 aaPredicted RBP14.59□□□□□ -0.07
TPM3-206ENST00000330188 PENKP01210 267 aaPredicted RBP14.59□□□□□ -0.07
TPM3-206ENST00000330188 GALTP07902 379 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 SERPINF2P08697 491 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 CD1DP15813 335 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 PEX2P28328 305 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 NFKB2Q00653 900 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 ILF2Q12905 390 aaKnown RBP14.59□□□□□ -0.07
TPM3-206ENST00000330188 ELAVL2Q12926 359 aaKnown RBP14.59□□□□□ -0.07
TPM3-206ENST00000330188 ART3Q13508 389 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 CEACAM7Q14002 265 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 LRRC36Q1X8D7 754 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 SFT2D3Q587I9 215 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 ZNF678Q5SXM1 525 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 MRNIPQ6NTE8 343 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 GK5Q6ZS86 529 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 ANKS3Q6ZW76 656 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 HMGCLL1Q8TB92 370 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 CD99L2Q8TCZ2 262 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 GDPD5Q8WTR4 605 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 BCL7CQ8WUZ0 217 aaPredicted RBP14.59□□□□□ -0.07
TPM3-206ENST00000330188 NSMCE3Q96MG7 304 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 NPAS2Q99743 824 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 MAGEH1Q9H213 219 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 POLR3BQ9NW08 1133 aaPredicted RBP14.59□□□□□ -0.07
TPM3-206ENST00000330188 LRFN2Q9ULH4 789 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 RIMKLBQ9ULI2 386 aa14.59□□□□□ -0.07
TPM3-206ENST00000330188 CFLARO15519 480 aa14.58□□□□□ -0.08
TPM3-206ENST00000330188 AOC2O75106 756 aa14.58□□□□□ -0.08
TPM3-206ENST00000330188 NDST3O95803 873 aa14.58□□□□□ -0.08
TPM3-206ENST00000330188 OGNP20774 298 aaKnown RBP14.58□□□□□ -0.08
TPM3-206ENST00000330188 SUOXP51687 545 aa14.58□□□□□ -0.08
TPM3-206ENST00000330188 PKNOX1P55347 436 aa14.58□□□□□ -0.08
TPM3-206ENST00000330188 GNA12Q03113 381 aa14.58□□□□□ -0.08
TPM3-206ENST00000330188 PPP1R3AQ16821 1122 aa14.58□□□□□ -0.08
TPM3-206ENST00000330188 TCTN1Q2MV58 587 aa14.58□□□□□ -0.08
TPM3-206ENST00000330188 FAM219BQ5XKK7 198 aa14.58□□□□□ -0.08
TPM3-206ENST00000330188 OR4L1Q8NH43 312 aa14.58□□□□□ -0.08
TPM3-206ENST00000330188 USP13Q92995 863 aaPredicted RBP14.58□□□□□ -0.08
TPM3-206ENST00000330188 PPP2R3CQ969Q6 453 aa14.58□□□□□ -0.08
TPM3-206ENST00000330188 TTPALQ9BTX7 342 aa14.58□□□□□ -0.08
TPM3-206ENST00000330188 TRMOQ9BU70 441 aa14.58□□□□□ -0.08
TPM3-206ENST00000330188 KLHL4Q9C0H6 718 aa14.58□□□□□ -0.08
TPM3-206ENST00000330188 VCXQ9H320 206 aa14.58□□□□□ -0.08
TPM3-206ENST00000330188 VCX3BQ9H321 246 aa14.58□□□□□ -0.08
TPM3-206ENST00000330188 CATSPERZQ9NTU4 200 aa14.58□□□□□ -0.08
TPM3-206ENST00000330188 SCOCQ9UIL1 159 aa14.58□□□□□ -0.08
TPM3-206ENST00000330188 DNMT3LQ9UJW3 386 aa14.58□□□□□ -0.08
TPM3-206ENST00000330188 ZFP37Q9Y6Q3 630 aaPredicted RBP14.58□□□□□ -0.08
TPM3-206ENST00000330188 GBF1Q92538 1859 aa14.58□□□□□ -0.08
TPM3-206ENST00000330188 TET1Q8NFU7 2136 aa14.58□□□□□ -0.08
TPM3-206ENST00000330188 H3BNC9 293 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 ADAM12O43184 909 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 GJB5O95377 273 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms