RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 NOVA2Q9UNW9 492 aaKnown RBP16.56■□□□□ 0.24
PDLIM1-201ENST00000329399 HS3ST2Q9Y278 367 aa16.56■□□□□ 0.24
PDLIM1-201ENST00000329399 SLCO1B1Q9Y6L6 691 aa16.56■□□□□ 0.24
PDLIM1-201ENST00000329399 EDDM13A0A1B0GTR0 161 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 MID1O15344 667 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 PRAMEF11O60813 436 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 IGLV3-19P01714 112 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 CTSLP07711 333 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 MAOBP27338 520 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 CD6P30203 668 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 CD68P34810 354 aaPredicted RBP16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 MPLP40238 635 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 VASPP50552 380 aaPredicted RBP16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 GPX6P59796 221 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 CDH17Q12864 832 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 FASTKD3Q14CZ7 662 aaKnown RBP16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 E2F5Q15329 346 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 LGSNQ5TDP6 509 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 FAXCQ5TGI0 409 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 STEAP4Q687X5 459 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 ZNF534Q76KX8 674 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 LPCAT2Q7L5N7 544 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 ANKMY2Q8IV38 441 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 TAB3Q8N5C8 712 aaPredicted RBP16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 AADATQ8N5Z0 425 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 DCAF4L2Q8NA75 395 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 PTCD2Q8WV60 388 aaKnown RBP16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 PIGKQ92643 395 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 VOPP1Q96AW1 172 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 STAMBPL1Q96FJ0 436 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 HMCESQ96FZ2 354 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 SPACA7Q96KW9 195 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 GPR174Q9BXC1 333 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 IL22Q9GZX6 179 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 TNKS2Q9H2K2 1166 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 ATP13A1Q9HD20 1204 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 CASS4Q9NQ75 786 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 PSMC3IPQ9P2W1 217 aaPredicted RBP16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 IKBKGQ9Y6K9 419 aa16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 ATXN2Q99700 1313 aaKnown RBP16.55■□□□□ 0.24
PDLIM1-201ENST00000329399 SRRM3A6NNA2 597 aaPredicted RBP16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 BNIP3LO60238 219 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 PGAM1P18669 254 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 NFKB1P19838 968 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 PPP2R2AP63151 447 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 POM121L1PQ3SYA9 428 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 CNTD1Q8N815 330 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 CHST14Q8NCH0 376 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 OR2A12Q8NGT7 310 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 GSDMBQ8TAX9 411 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 LRRN4Q8WUT4 740 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 ZNF419Q96HQ0 510 aaPredicted RBP16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 C2orf49Q9BVC5 232 aaPredicted RBP16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 FSCN3Q9NQT6 498 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 SAMD15Q9P1V8 674 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 SLC25A13Q9UJS0 675 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 CHMP2BQ9UQN3 213 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 FCF1Q9Y324 198 aaKnown RBP16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 CEP192Q8TEP8 1941 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 KDELR3O43731 214 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 PEX11BO96011 259 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 POLBP06746 335 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 ACADMP11310 421 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 SLC8A1P32418 973 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 PSMD8P48556 350 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 MAGOHP61326 146 aaKnown RBP16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 LAMB3Q13751 1172 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 CST6Q15828 149 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 CSRP2Q16527 193 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 LONRF1Q17RB8 773 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 ZNF776Q68DI1 518 aaPredicted RBP16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 KCTD16Q68DU8 428 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 IL31Q6EBC2 164 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 ADGRD1Q6QNK2 874 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 EPS8L3Q8TE67 593 aaKnown RBP16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 FBF1Q8TES7 1133 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 HSPA12BQ96MM6 686 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 C6orf106Q9H6K1 298 aaPredicted RBP16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 EURLQ9NYK6 297 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 ZNF180Q9UJW8 692 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 PILRBQ9UKJ0 227 aa16.54■□□□□ 0.24
PDLIM1-201ENST00000329399 SHROOM3Q8TF72 1996 aa16.53■□□□□ 0.24
PDLIM1-201ENST00000329399 A0A1W2PP55 124 aa16.53■□□□□ 0.24
PDLIM1-201ENST00000329399 ZNF806P0C7X5 589 aa16.53■□□□□ 0.24
PDLIM1-201ENST00000329399 CNTFP26441 200 aa16.53■□□□□ 0.24
PDLIM1-201ENST00000329399 SSTR1P30872 391 aa16.53■□□□□ 0.24
PDLIM1-201ENST00000329399 DRD3P35462 400 aa16.53■□□□□ 0.24
PDLIM1-201ENST00000329399 NNMTP40261 264 aa16.53■□□□□ 0.24
PDLIM1-201ENST00000329399 MSH2P43246 934 aa16.53■□□□□ 0.24
PDLIM1-201ENST00000329399 LBRQ14739 615 aaKnown RBP16.53■□□□□ 0.24
PDLIM1-201ENST00000329399 SPANXN3Q5MJ09 141 aa16.53■□□□□ 0.24
PDLIM1-201ENST00000329399 ALG1LQ6GMV1 187 aa16.53■□□□□ 0.24
PDLIM1-201ENST00000329399 SLC36A4Q6YBV0 504 aa16.53■□□□□ 0.24
PDLIM1-201ENST00000329399 DNAAF3Q8N9W5 541 aa16.53■□□□□ 0.24
PDLIM1-201ENST00000329399 UHMK1Q8TAS1 419 aaKnown RBP16.53■□□□□ 0.24
PDLIM1-201ENST00000329399 CDKL2Q92772 493 aa16.53■□□□□ 0.24
PDLIM1-201ENST00000329399 CENPTQ96BT3 561 aa16.53■□□□□ 0.24
PDLIM1-201ENST00000329399 IMP4Q96G21 291 aaKnown RBP16.53■□□□□ 0.24
PDLIM1-201ENST00000329399 DHRS4Q9BTZ2 278 aa16.53■□□□□ 0.24
PDLIM1-201ENST00000329399 ARNT2Q9HBZ2 717 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms