RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 KIAA0930Q6ICG6 404 aaPredicted RBP11.44□□□□□ -0.58
COL4A5-201ENST00000328300 RAVER1Q8IY67 606 aaKnown RBP11.44□□□□□ -0.58
COL4A5-201ENST00000328300 PROX1Q92786 737 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 SCML2Q9UQR0 700 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 ANGPT4Q9Y264 503 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 ILVBLA1L0T0 632 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 CNOT3O75175 753 aaKnown RBP11.44□□□□□ -0.58
COL4A5-201ENST00000328300 C8AP07357 584 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 ADSLP30566 484 aaPredicted RBP11.44□□□□□ -0.58
COL4A5-201ENST00000328300 MRPL28Q13084 256 aaKnown RBP11.44□□□□□ -0.58
COL4A5-201ENST00000328300 SEMA5AQ13591 1074 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 CCL14Q16627 93 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 GDF6Q6KF10 455 aaPredicted RBP11.44□□□□□ -0.58
COL4A5-201ENST00000328300 ZNF549Q6P9A3 640 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 ADGRD1Q6QNK2 874 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 ZBTB49Q6ZSB9 765 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 CLEC20AQ6ZU45 233 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 RD3Q7Z3Z2 195 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 NET1Q7Z628 596 aaPredicted RBP11.44□□□□□ -0.58
COL4A5-201ENST00000328300 SNX32Q86XE0 403 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 PHYKPLQ8IUZ5 450 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 CPT1BQ92523 772 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 DPEP3Q9H4B8 488 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 CAAP1Q9H8G2 361 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 KRT84Q9NSB2 600 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 KLQ9UEF7 1012 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 MRPS33Q9Y291 106 aaKnown RBP11.44□□□□□ -0.58
COL4A5-201ENST00000328300 USP54Q70EL1 1684 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 RGPD5Q99666 1765 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 ATXN2Q99700 1313 aaKnown RBP11.44□□□□□ -0.58
COL4A5-201ENST00000328300 MSI1O43347 362 aaKnown RBP11.44□□□□□ -0.58
COL4A5-201ENST00000328300 HS6ST1O60243 411 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 ATP6V1C1P21283 382 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 SLC34A1Q06495 639 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 KRR1Q13601 381 aaKnown RBP11.44□□□□□ -0.58
COL4A5-201ENST00000328300 ZBTB2Q8N680 514 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 SPOCK2Q92563 424 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 PCBD2Q9H0N5 130 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 RNF19AQ9NV58 838 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 PRPF19Q9UMS4 504 aaKnown RBP11.44□□□□□ -0.58
COL4A5-201ENST00000328300 C5P01031 1676 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 NRP1O14786 923 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 SLC25A14O95258 325 aaPredicted RBP11.43□□□□□ -0.58
COL4A5-201ENST00000328300 ESR1P03372 595 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 HSD17B2P37059 387 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 PPIDQ08752 370 aaKnown RBP11.43□□□□□ -0.58
COL4A5-201ENST00000328300 CBX2Q14781 532 aaPredicted RBP11.43□□□□□ -0.58
COL4A5-201ENST00000328300 C7orf61Q8IZ16 206 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 RERGQ96A58 199 aaPredicted RBP11.43□□□□□ -0.58
COL4A5-201ENST00000328300 FANCEQ9HB96 536 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 ADAMTS5Q9UNA0 930 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 MYBPHLA2RUH7 354 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 AMD1P17707 334 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 CDH5P33151 784 aaPredicted RBP11.43□□□□□ -0.58
COL4A5-201ENST00000328300 LIMK2P53671 638 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 SP2Q02086 613 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 ZBED3Q96IU2 234 aaPredicted RBP11.43□□□□□ -0.58
COL4A5-201ENST00000328300 TEKT5Q96M29 485 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 RAB11FIP5Q9BXF6 653 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 C10orf88Q9H8K7 445 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 ZFP37Q9Y6Q3 630 aaPredicted RBP11.43□□□□□ -0.58
COL4A5-201ENST00000328300 RASSF9O75901 435 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 ALDH9A1P49189 494 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 CLK3P49761 638 aaKnown RBP11.43□□□□□ -0.58
COL4A5-201ENST00000328300 NAGLUP54802 743 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 METTL21CQ5VZV1 264 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 MARK2Q7KZI7 788 aaKnown RBP11.43□□□□□ -0.58
COL4A5-201ENST00000328300 ADHFE1Q8IWW8 467 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 LINGO1Q96FE5 620 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 C7orf26Q96N11 449 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 MYLK2Q9H1R3 596 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 SMOC2Q9H3U7 446 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 DZANK1Q9NVP4 752 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 RGSL1A5PLK6 1076 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 RNF225M0QZC1 329 aaPredicted RBP11.43□□□□□ -0.58
COL4A5-201ENST00000328300 CCL16O15467 120 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 SNAI1O95863 264 aaPredicted RBP11.43□□□□□ -0.58
COL4A5-201ENST00000328300 BPGMP07738 259 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 IDSP22304 550 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 PTGER3P43115 390 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 TLE2Q04725 743 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 GPR17Q13304 367 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 C1DQ13901 141 aaKnown RBP11.43□□□□□ -0.58
COL4A5-201ENST00000328300 GALNT3Q14435 633 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 SLC35G1Q2M3R5 365 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 SLC44A4Q53GD3 710 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 TSTD2Q5T7W7 516 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 KCTD4Q8WVF5 259 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 HIC2Q96JB3 615 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 HEBP2Q9Y5Z4 205 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 CPQQ9Y646 472 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 PLCH1Q4KWH8 1693 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 CCDC189A1A4V9 331 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 OR4Q2P0C623 313 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 GTF2E2P29084 291 aaKnown RBP11.43□□□□□ -0.58
COL4A5-201ENST00000328300 CCNFP41002 786 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 DGKGP49619 791 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 CXCR3P49682 368 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 CLK1P49759 484 aaKnown RBP11.43□□□□□ -0.58
COL4A5-201ENST00000328300 PRKG2Q13237 762 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms