RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 CAPRIN1Q14444 709 aaKnown RBP12.82□□□□□ -0.36
CCDC60-201ENST00000327554 SNX17Q15036 470 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 CTF1Q16619 201 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 CYP51A1Q16850 503 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 VASH1Q7L8A9 365 aaPredicted RBP12.82□□□□□ -0.36
CCDC60-201ENST00000327554 ZBTB8OSQ8IWT0 167 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 SLC22A17Q8WUG5 538 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 HEXDCQ8WVB3 486 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 MRPL57Q9BQC6 102 aaKnown RBP12.82□□□□□ -0.36
CCDC60-201ENST00000327554 RMND5AQ9H871 391 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 MRM3Q9HC36 420 aaKnown RBP12.82□□□□□ -0.36
CCDC60-201ENST00000327554 THG1LQ9NWX6 298 aaKnown RBP12.82□□□□□ -0.36
CCDC60-201ENST00000327554 NSMCE4AQ9NXX6 385 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 FZD10Q9ULW2 581 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 A0A0G2JMZ2 1700 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 LRRC37A2A6NM11 1700 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 A0A0J9YYE9 177 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 NR5A2O00482 541 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 TOR1BO14657 336 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 INPP4BO15327 924 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 GMNNO75496 209 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 ALBP02768 609 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 CAPN3P20807 821 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 PAX3P23760 479 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 NPY2RP49146 381 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 NEK2P51955 445 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 PYCR3Q53H96 274 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 LINC00299Q6ZSB3 139 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 R3HCC1LQ7Z5L2 792 aaKnown RBP12.82□□□□□ -0.36
CCDC60-201ENST00000327554 ITIH5Q86UX2 942 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 FAM131BQ86XD5 332 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 SPNS2Q8IVW8 549 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 AFAP1L2Q8N4X5 818 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 ATP6V0D2Q8N8Y2 350 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 S100ZQ8WXG8 99 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 SLC30A3Q99726 388 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 CYP4F12Q9HCS2 524 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 PCDH12Q9NPG4 1184 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 TMPRSS4Q9NRS4 437 aa12.82□□□□□ -0.36
CCDC60-201ENST00000327554 ATP6AP2A0A1C7CYW4 349 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 VWA5AO00534 786 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 XYLBO75191 536 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 ATP6AP2O75787 350 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 MT-ND1P03886 318 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 MYL3P08590 195 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 BMP4P12644 408 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 SKIV2LQ15477 1246 aaKnown RBP12.81□□□□□ -0.36
CCDC60-201ENST00000327554 DPY19L1Q2PZI1 675 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 ZIK1Q3SY52 487 aaPredicted RBP12.81□□□□□ -0.36
CCDC60-201ENST00000327554 UGT3A2Q3SY77 523 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 RBM48Q5RL73 367 aaKnown RBP12.81□□□□□ -0.36
CCDC60-201ENST00000327554 LEMD2Q8NC56 503 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 RNF139Q8WU17 664 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 ATG4CQ96DT6 458 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 TRIM8Q9BZR9 551 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 WARS2Q9UGM6 360 aaKnown RBP12.81□□□□□ -0.36
CCDC60-201ENST00000327554 ATP11BQ9Y2G3 1177 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 RLFQ13129 1914 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 FAM95CA0A1B0GW59 222 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 ANKRD34BA5PLL1 514 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 YDJCA8MPS7 323 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 ZBTB24O43167 697 aaPredicted RBP12.81□□□□□ -0.36
CCDC60-201ENST00000327554 ZBTB7AO95365 584 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 LDLRP01130 860 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 IL7RP16871 459 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 STMN1P16949 149 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 CHRM3P20309 590 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 CD68P34810 354 aaPredicted RBP12.81□□□□□ -0.36
CCDC60-201ENST00000327554 POLD3Q15054 466 aaPredicted RBP12.81□□□□□ -0.36
CCDC60-201ENST00000327554 PAFAH1B3Q15102 231 aaKnown RBP12.81□□□□□ -0.36
CCDC60-201ENST00000327554 VPS26BQ4G0F5 336 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 IER5Q5VY09 327 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 KIAA0408Q6ZU52 694 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 SLCO6A1Q86UG4 719 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 ZDHHC17Q8IUH5 632 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 MMAAQ8IVH4 418 aaKnown RBP12.81□□□□□ -0.36
CCDC60-201ENST00000327554 DENND6AQ8IWF6 608 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 TBC1D21Q8IYX1 336 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 Q8N9G6 341 aaPredicted RBP12.81□□□□□ -0.36
CCDC60-201ENST00000327554 SMG8Q8ND04 991 aaKnown RBP12.81□□□□□ -0.36
CCDC60-201ENST00000327554 DNERQ8NFT8 737 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 MUL1Q969V5 352 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 ZNF668Q96K58 619 aaPredicted RBP12.81□□□□□ -0.36
CCDC60-201ENST00000327554 UBXN10Q96LJ8 280 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 C3orf30Q96M34 536 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 IL12RB2Q99665 862 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 HOXD1Q9GZZ0 328 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 ING2Q9H160 280 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 EML4Q9HC35 981 aaKnown RBP12.81□□□□□ -0.36
CCDC60-201ENST00000327554 SETD4Q9NVD3 440 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 NDUFAF1Q9Y375 327 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 PCDHGA11Q9Y5H2 935 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 PCDHA9Q9Y5H5 950 aa12.81□□□□□ -0.36
CCDC60-201ENST00000327554 A8MT66 165 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 PSMD11O00231 422 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 ACKR2O00590 384 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 UBFD1O14562 309 aaKnown RBP12.8□□□□□ -0.36
CCDC60-201ENST00000327554 TAS2R39P59534 338 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 STX1BP61266 288 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 CLCQ05315 142 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms