RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 CRTC1Q6UUV9 634 aa15.32■□□□□ 0.04
PRPF3-201ENST00000324862 AADATQ8N5Z0 425 aa15.32■□□□□ 0.04
PRPF3-201ENST00000324862 OR4K2Q8NGD2 314 aa15.32■□□□□ 0.04
PRPF3-201ENST00000324862 GSDMBQ8TAX9 411 aa15.32■□□□□ 0.04
PRPF3-201ENST00000324862 TBATAQ96M53 351 aa15.32■□□□□ 0.04
PRPF3-201ENST00000324862 AGAP2Q99490 1192 aa15.32■□□□□ 0.04
PRPF3-201ENST00000324862 TREX1Q9NSU2 369 aa15.32■□□□□ 0.04
PRPF3-201ENST00000324862 WNT16Q9UBV4 365 aa15.32■□□□□ 0.04
PRPF3-201ENST00000324862 HEATR9A2RTY3 570 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 CAPN8A6NHC0 703 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 FAM170BA6NMN3 283 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 POC1B-GALNT4F8VUJ3 575 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 USP1O94782 785 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 ZNF844Q08AG5 666 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 HSP90AA5PQ58FG0 334 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 TMEM31Q5JXX7 168 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 STEAP4Q687X5 459 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 LRRC66Q68CR7 880 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 TTC30BQ8N4P2 665 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 SCRN2Q96FV2 425 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 TTC25Q96NG3 672 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 RSPH9Q9H1X1 276 aaPredicted RBP15.31■□□□□ 0.04
PRPF3-201ENST00000324862 LTB4R2Q9NPC1 389 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 MOCS1Q9NZB8 636 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 PHTF1Q9UMS5 762 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 STK25O00506 426 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 MAN2B1O00754 1011 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 PDGFBP01127 241 aaPredicted RBP15.31■□□□□ 0.04
PRPF3-201ENST00000324862 GCAP28676 217 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 DRD3P35462 400 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 CNTN1Q12860 1018 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 GRM3Q14832 879 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 CST6Q15828 149 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 SDE2Q6IQ49 451 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 BRAT1Q6PJG6 821 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 CEP128Q6ZU80 1094 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 LDB1Q86U70 411 aaPredicted RBP15.31■□□□□ 0.04
PRPF3-201ENST00000324862 TMPRSS6Q8IU80 811 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.31■□□□□ 0.04
PRPF3-201ENST00000324862 TMIEQ8NEW7 156 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 HDAC10Q969S8 669 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 OSBPL1AQ9BXW6 950 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 GPR63Q9BZJ6 419 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 C20orf96Q9NUD7 363 aaPredicted RBP15.31■□□□□ 0.04
PRPF3-201ENST00000324862 PSAT1Q9Y617 370 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 FAM169AQ9Y6X4 670 aa15.31■□□□□ 0.04
PRPF3-201ENST00000324862 BDP1A6H8Y1 2624 aa15.3■□□□□ 0.04
PRPF3-201ENST00000324862 A0A1W2PP55 124 aa15.3■□□□□ 0.04
PRPF3-201ENST00000324862 KANSL1LA0AUZ9 987 aa15.3■□□□□ 0.04
PRPF3-201ENST00000324862 TLDC2A0PJX2 215 aa15.3■□□□□ 0.04
PRPF3-201ENST00000324862 AP3B1O00203 1094 aa15.3■□□□□ 0.04
PRPF3-201ENST00000324862 NUDT17P0C025 328 aa15.3■□□□□ 0.04
PRPF3-201ENST00000324862 ABCG1P45844 678 aa15.3■□□□□ 0.04
PRPF3-201ENST00000324862 ARCN1P48444 511 aaKnown RBP15.3■□□□□ 0.04
PRPF3-201ENST00000324862 ZNF140P52738 457 aaPredicted RBP15.3■□□□□ 0.04
PRPF3-201ENST00000324862 MRPS21P82921 87 aaKnown RBP15.3■□□□□ 0.04
PRPF3-201ENST00000324862 PTSQ03393 145 aa15.3■□□□□ 0.04
PRPF3-201ENST00000324862 SKIDA1Q1XH10 827 aa15.3■□□□□ 0.04
PRPF3-201ENST00000324862 TRIM67Q6ZTA4 783 aa15.3■□□□□ 0.04
PRPF3-201ENST00000324862 CTAGE3PQ8IX95 158 aa15.3■□□□□ 0.04
PRPF3-201ENST00000324862 CERS2Q96G23 380 aa15.3■□□□□ 0.04
PRPF3-201ENST00000324862 LRIG1Q96JA1 1093 aa15.3■□□□□ 0.04
PRPF3-201ENST00000324862 MCCC1Q96RQ3 725 aaPredicted RBP15.3■□□□□ 0.04
PRPF3-201ENST00000324862 RANBP9Q96S59 729 aa15.3■□□□□ 0.04
PRPF3-201ENST00000324862 WRAP53Q9BUR4 548 aaKnown RBP15.3■□□□□ 0.04
PRPF3-201ENST00000324862 ZFYVE1Q9HBF4 777 aa15.3■□□□□ 0.04
PRPF3-201ENST00000324862 MAGEE1Q9HCI5 957 aa15.3■□□□□ 0.04
PRPF3-201ENST00000324862 VPS13AQ96RL7 3174 aa15.29■□□□□ 0.04
PRPF3-201ENST00000324862 A0A087WUV0 522 aaPredicted RBP15.29■□□□□ 0.04
PRPF3-201ENST00000324862 UPK3BL1B0FP48 263 aa15.29■□□□□ 0.04
PRPF3-201ENST00000324862 UPK3BL2E5RIL1 263 aa15.29■□□□□ 0.04
PRPF3-201ENST00000324862 P2RY2P41231 377 aa15.29■□□□□ 0.04
PRPF3-201ENST00000324862 STARD6P59095 220 aa15.29■□□□□ 0.04
PRPF3-201ENST00000324862 RPS14P62263 151 aaKnown RBP15.29■□□□□ 0.04
PRPF3-201ENST00000324862 PRKCQQ04759 706 aa15.29■□□□□ 0.04
PRPF3-201ENST00000324862 STARD3Q14849 445 aa15.29■□□□□ 0.04
PRPF3-201ENST00000324862 TAF1AQ15573 450 aaPredicted RBP15.29■□□□□ 0.04
PRPF3-201ENST00000324862 CEP85LQ5SZL2 805 aa15.29■□□□□ 0.04
PRPF3-201ENST00000324862 FBXL19Q6PCT2 694 aa15.29■□□□□ 0.04
PRPF3-201ENST00000324862 PTAR1Q7Z6K3 402 aaPredicted RBP15.29■□□□□ 0.04
PRPF3-201ENST00000324862 SPNS2Q8IVW8 549 aa15.29■□□□□ 0.04
PRPF3-201ENST00000324862 TBC1D17Q9HA65 648 aa15.29■□□□□ 0.04
PRPF3-201ENST00000324862 TBK1Q9UHD2 729 aa15.29■□□□□ 0.04
PRPF3-201ENST00000324862 CD84Q9UIB8 345 aa15.29■□□□□ 0.04
PRPF3-201ENST00000324862 FKBPLQ9UIM3 349 aa15.29■□□□□ 0.04
PRPF3-201ENST00000324862 EXOC1LA0A1B0GW35 172 aa15.29■□□□□ 0.04
PRPF3-201ENST00000324862 TSPAN11A1L157 253 aa15.29■□□□□ 0.04
PRPF3-201ENST00000324862 MAGEB16A2A368 324 aa15.29■□□□□ 0.04
PRPF3-201ENST00000324862 ADRB3P13945 408 aa15.29■□□□□ 0.04
PRPF3-201ENST00000324862 ITGB7P26010 798 aa15.29■□□□□ 0.04
PRPF3-201ENST00000324862 CA5AP35218 305 aa15.29■□□□□ 0.04
PRPF3-201ENST00000324862 CDKN1CP49918 316 aaPredicted RBP15.29■□□□□ 0.04
PRPF3-201ENST00000324862 RPL26P61254 145 aaKnown RBP15.29■□□□□ 0.04
PRPF3-201ENST00000324862 IFFO1Q0D2I5 559 aa15.29■□□□□ 0.04
PRPF3-201ENST00000324862 CRY1Q16526 586 aa15.29■□□□□ 0.04
PRPF3-201ENST00000324862 FBXO43Q4G163 708 aa15.29■□□□□ 0.04
PRPF3-201ENST00000324862 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.29■□□□□ 0.04
PRPF3-201ENST00000324862 USP45Q70EL2 814 aa15.29■□□□□ 0.04
PRPF3-201ENST00000324862 DENND6AQ8IWF6 608 aa15.29■□□□□ 0.04
PRPF3-201ENST00000324862 PPM1NQ8N819 430 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms