RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 ZNF248Q8NDW4 579 aa21.08■□□□□ 0.96
RNF40-201ENST00000324685 ZNF446Q9NWS9 450 aa21.08■□□□□ 0.96
RNF40-201ENST00000324685 PACSIN3Q9UKS6 424 aa21.08■□□□□ 0.96
RNF40-201ENST00000324685 POLR3HQ9Y535 204 aaPredicted RBP21.08■□□□□ 0.96
RNF40-201ENST00000324685 RALGDSQ12967 914 aa21.08■□□□□ 0.96
RNF40-201ENST00000324685 HEXDCQ8WVB3 486 aa21.08■□□□□ 0.96
RNF40-201ENST00000324685 ZNHIT2Q9UHR6 403 aa21.08■□□□□ 0.96
RNF40-201ENST00000324685 FBXO5Q9UKT4 447 aa21.08■□□□□ 0.96
RNF40-201ENST00000324685 UBIAD1Q9Y5Z9 338 aa21.08■□□□□ 0.96
RNF40-201ENST00000324685 ZNF780BQ9Y6R6 833 aa21.08■□□□□ 0.96
RNF40-201ENST00000324685 KLRC4O43908 158 aa21.07■□□□□ 0.96
RNF40-201ENST00000324685 FARP2O94887 1054 aaPredicted RBP21.07■□□□□ 0.96
RNF40-201ENST00000324685 MATKP42679 507 aa21.07■□□□□ 0.96
RNF40-201ENST00000324685 CDK18Q07002 472 aa21.07■□□□□ 0.96
RNF40-201ENST00000324685 MKL1Q969V6 931 aa21.07■□□□□ 0.96
RNF40-201ENST00000324685 PPCDCQ96CD2 204 aa21.07■□□□□ 0.96
RNF40-201ENST00000324685 ZNF558Q96NG5 402 aa21.07■□□□□ 0.96
RNF40-201ENST00000324685 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.07■□□□□ 0.96
RNF40-201ENST00000324685 ST3GAL5Q9UNP4 418 aa21.07■□□□□ 0.96
RNF40-201ENST00000324685 KCNE2Q9Y6J6 123 aa21.07■□□□□ 0.96
RNF40-201ENST00000324685 TCRBV9S1A1TA0A576 114 aa21.07■□□□□ 0.96
RNF40-201ENST00000324685 CCNDBP1O95273 360 aa21.07■□□□□ 0.96
RNF40-201ENST00000324685 MRPS5P82675 430 aaKnown RBP21.07■□□□□ 0.96
RNF40-201ENST00000324685 FOXR2Q6PJQ5 311 aa21.07■□□□□ 0.96
RNF40-201ENST00000324685 TRABD2AQ86V40 505 aa21.07■□□□□ 0.96
RNF40-201ENST00000324685 CYP4X1Q8N118 509 aa21.07■□□□□ 0.96
RNF40-201ENST00000324685 PIH1D2Q8WWB5 315 aa21.07■□□□□ 0.96
RNF40-201ENST00000324685 ADSLP30566 484 aaPredicted RBP21.07■□□□□ 0.96
RNF40-201ENST00000324685 BICRALQ6AI39 1079 aa21.07■□□□□ 0.96
RNF40-201ENST00000324685 DPF3Q92784 378 aa21.07■□□□□ 0.96
RNF40-201ENST00000324685 BORCS5Q969J3 196 aa21.07■□□□□ 0.96
RNF40-201ENST00000324685 AKT1S1Q96B36 256 aa21.07■□□□□ 0.96
RNF40-201ENST00000324685 ASAH2Q9NR71 780 aa21.07■□□□□ 0.96
RNF40-201ENST00000324685 TRMT13Q9NUP7 481 aaKnown RBP21.07■□□□□ 0.96
RNF40-201ENST00000324685 AGO1Q9UL18 857 aaKnown RBP21.07■□□□□ 0.96
RNF40-201ENST00000324685 SLC28A2O43868 658 aa21.07■□□□□ 0.96
RNF40-201ENST00000324685 ADGRG2Q8IZP9 1017 aa21.07■□□□□ 0.96
RNF40-201ENST00000324685 CDT1Q9H211 546 aa21.07■□□□□ 0.96
RNF40-201ENST00000324685 MUC13Q9H3R2 512 aa21.07■□□□□ 0.96
RNF40-201ENST00000324685 WBP11Q9Y2W2 641 aaKnown RBP21.07■□□□□ 0.96
RNF40-201ENST00000324685 GTPBP1O00178 669 aaKnown RBP21.06■□□□□ 0.96
RNF40-201ENST00000324685 LYPLA1O75608 230 aaPredicted RBP21.06■□□□□ 0.96
RNF40-201ENST00000324685 TSPAN8P19075 237 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 PTGES3Q15185 160 aaKnown RBP21.06■□□□□ 0.96
RNF40-201ENST00000324685 MED22Q15528 200 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 VSIG10LQ86VR7 867 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 PPIEQ9UNP9 301 aaKnown RBP21.06■□□□□ 0.96
RNF40-201ENST00000324685 PGRMC2O15173 223 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 HNRNPLP14866 589 aaKnown RBP eCLIP21.06■□□□□ 0.96
RNF40-201ENST00000324685 FAUP35544 74 aaKnown RBP21.06■□□□□ 0.96
RNF40-201ENST00000324685 BUD31P41223 144 aaPredicted RBP21.06■□□□□ 0.96
RNF40-201ENST00000324685 TAS2R41P59536 307 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 ABRQ12979 859 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 HKDC1Q2TB90 917 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 SCIMPQ6UWF3 145 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 PLPPR4Q7Z2D5 763 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 HELQQ8TDG4 1101 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 TTLL2Q9BWV7 592 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 TDRD1Q9BXT4 1180 aaKnown RBP21.06■□□□□ 0.96
RNF40-201ENST00000324685 GPC6Q9Y625 555 aaPredicted RBP21.06■□□□□ 0.96
RNF40-201ENST00000324685 STX16-NPEPL1H3BU86 382 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 STX16O14662 325 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 BRMS1LQ5PSV4 323 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 TAPT1Q6NXT6 567 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 ADCY4Q8NFM4 1077 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 VWA7Q9Y334 891 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 PPRC1Q5VV67 1664 aaKnown RBP21.06■□□□□ 0.96
RNF40-201ENST00000324685 FAM92AA1XBS5 289 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 BPGMP07738 259 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 MARCKSL1P49006 195 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 OAFQ86UD1 273 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 CUZD1Q86UP6 607 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 KIAA0319LQ8IZA0 1049 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 TCAIMQ8N3R3 496 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 OR52K2Q8NGK3 314 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 DNAJC19Q96DA6 116 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 DSN1Q9H410 356 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 SLC35C2Q9NQQ7 365 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 WNT10BO00744 389 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 SMIM10L2AP0DMW4 78 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 SMIM10L2BP0DMW5 78 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 HDCP19113 662 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 ZDHHC20Q5W0Z9 365 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 CNSTQ6PJW8 725 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 TNS4Q8IZW8 715 aa21.06■□□□□ 0.96
RNF40-201ENST00000324685 KRT33AO76009 404 aa21.05■□□□□ 0.96
RNF40-201ENST00000324685 CDH3P22223 829 aa21.05■□□□□ 0.96
RNF40-201ENST00000324685 MC4RP32245 332 aa21.05■□□□□ 0.96
RNF40-201ENST00000324685 CTBP1Q13363 440 aa21.05■□□□□ 0.96
RNF40-201ENST00000324685 ACP6Q9NPH0 428 aa21.05■□□□□ 0.96
RNF40-201ENST00000324685 ABLIM1O14639 778 aa21.05■□□□□ 0.96
RNF40-201ENST00000324685 SLC7A2P52569 658 aa21.05■□□□□ 0.96
RNF40-201ENST00000324685 APOBEC3HQ6NTF7 200 aaKnown RBP21.05■□□□□ 0.96
RNF40-201ENST00000324685 PJA1Q8NG27 643 aa21.05■□□□□ 0.96
RNF40-201ENST00000324685 CERKQ8TCT0 537 aa21.05■□□□□ 0.96
RNF40-201ENST00000324685 LGMNQ99538 433 aa21.05■□□□□ 0.96
RNF40-201ENST00000324685 PNPOQ9NVS9 261 aa21.05■□□□□ 0.96
RNF40-201ENST00000324685 TRAF6Q9Y4K3 522 aa21.05■□□□□ 0.96
RNF40-201ENST00000324685 ERCC2P18074 760 aa21.05■□□□□ 0.96
RNF40-201ENST00000324685 ACTR3P61158 418 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms