RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 TBXAS1P24557 533 aaPredicted RBP6.71□□□□□ -1.33
CSTF3-201ENST00000323959 ACAT1P24752 427 aaKnown RBP6.71□□□□□ -1.33
CSTF3-201ENST00000323959 LIG4P49917 911 aa6.71□□□□□ -1.33
CSTF3-201ENST00000323959 MXI1P50539 228 aa6.71□□□□□ -1.33
CSTF3-201ENST00000323959 BLKP51451 505 aa6.71□□□□□ -1.33
CSTF3-201ENST00000323959 GSCP56915 257 aaPredicted RBP6.71□□□□□ -1.33
CSTF3-201ENST00000323959 POLR2FP61218 127 aaKnown RBP6.71□□□□□ -1.33
CSTF3-201ENST00000323959 OTUD4Q01804 1114 aaKnown RBP6.71□□□□□ -1.33
CSTF3-201ENST00000323959 PPP3CAQ08209 521 aa6.71□□□□□ -1.33
CSTF3-201ENST00000323959 SPA17Q15506 151 aa6.71□□□□□ -1.33
CSTF3-201ENST00000323959 WHAMMP3Q1A5X7 153 aa6.71□□□□□ -1.33
CSTF3-201ENST00000323959 RRAGAQ7L523 313 aa6.71□□□□□ -1.33
CSTF3-201ENST00000323959 DPH6Q7L8W6 267 aa6.71□□□□□ -1.33
CSTF3-201ENST00000323959 SLFN11Q7Z7L1 901 aa6.71□□□□□ -1.33
CSTF3-201ENST00000323959 VPS36Q86VN1 386 aa6.71□□□□□ -1.33
CSTF3-201ENST00000323959 OSTM1Q86WC4 334 aa6.71□□□□□ -1.33
CSTF3-201ENST00000323959 Q8N9G6 341 aaPredicted RBP6.71□□□□□ -1.33
CSTF3-201ENST00000323959 DENND6BQ8NEG7 585 aa6.71□□□□□ -1.33
CSTF3-201ENST00000323959 MYO19Q96H55 970 aa6.71□□□□□ -1.33
CSTF3-201ENST00000323959 LENG8Q96PV6 779 aaPredicted RBP6.71□□□□□ -1.33
CSTF3-201ENST00000323959 HAPLN2Q9GZV7 340 aa6.71□□□□□ -1.33
CSTF3-201ENST00000323959 ZNHIT2Q9UHR6 403 aa6.71□□□□□ -1.33
CSTF3-201ENST00000323959 KLF15Q9UIH9 416 aa6.71□□□□□ -1.33
CSTF3-201ENST00000323959 AGO2Q9UKV8 859 aaKnown RBP6.71□□□□□ -1.33
CSTF3-201ENST00000323959 FER1L5A0AVI2 2057 aa6.71□□□□□ -1.34
CSTF3-201ENST00000323959 BIRC6Q9NR09 4857 aa6.71□□□□□ -1.34
CSTF3-201ENST00000323959 CCDC169A6NNP5 214 aa6.71□□□□□ -1.34
CSTF3-201ENST00000323959 CCL21O00585 134 aa6.71□□□□□ -1.34
CSTF3-201ENST00000323959 HNRNPDLO14979 420 aaKnown RBP6.71□□□□□ -1.34
CSTF3-201ENST00000323959 CLDN3O15551 220 aa6.71□□□□□ -1.34
CSTF3-201ENST00000323959 CLSTN1O94985 981 aa6.71□□□□□ -1.34
CSTF3-201ENST00000323959 IPO7O95373 1038 aaKnown RBP6.71□□□□□ -1.34
CSTF3-201ENST00000323959 HOXC12P31275 282 aa6.71□□□□□ -1.34
CSTF3-201ENST00000323959 ATICP31939 592 aa6.71□□□□□ -1.34
CSTF3-201ENST00000323959 EIF4A3P38919 411 aaKnown RBP6.71□□□□□ -1.34
CSTF3-201ENST00000323959 BPIFB4P59827 614 aa6.71□□□□□ -1.34
CSTF3-201ENST00000323959 DNASE1L3Q13609 305 aa6.71□□□□□ -1.34
CSTF3-201ENST00000323959 IFI16Q16666 785 aaKnown RBP6.71□□□□□ -1.34
CSTF3-201ENST00000323959 PRRT3Q5FWE3 981 aa6.71□□□□□ -1.34
CSTF3-201ENST00000323959 B3GNTL1Q67FW5 361 aaPredicted RBP6.71□□□□□ -1.34
CSTF3-201ENST00000323959 SYVN1Q86TM6 617 aa6.71□□□□□ -1.34
CSTF3-201ENST00000323959 TMEM135Q86UB9 458 aa6.71□□□□□ -1.34
CSTF3-201ENST00000323959 MYCBPAPQ8TBZ2 947 aa6.71□□□□□ -1.34
CSTF3-201ENST00000323959 FAR1Q8WVX9 515 aa6.71□□□□□ -1.34
CSTF3-201ENST00000323959 ASB12Q8WXK4 309 aa6.71□□□□□ -1.34
CSTF3-201ENST00000323959 BHMTQ93088 406 aa6.71□□□□□ -1.34
CSTF3-201ENST00000323959 BMFQ96LC9 184 aa6.71□□□□□ -1.34
CSTF3-201ENST00000323959 CDK5RAP1Q96SZ6 601 aaKnown RBP6.71□□□□□ -1.34
CSTF3-201ENST00000323959 ISCUQ9H1K1 167 aa6.71□□□□□ -1.34
CSTF3-201ENST00000323959 CRTAC1Q9NQ79 661 aa6.71□□□□□ -1.34
CSTF3-201ENST00000323959 TLR8Q9NR97 1041 aaKnown RBP6.71□□□□□ -1.34
CSTF3-201ENST00000323959 FAM207AQ9NSI2 230 aaPredicted RBP6.71□□□□□ -1.34
CSTF3-201ENST00000323959 DPP3Q9NY33 737 aa6.71□□□□□ -1.34
CSTF3-201ENST00000323959 ARMCX1Q9P291 453 aa6.71□□□□□ -1.34
CSTF3-201ENST00000323959 FHOD1Q9Y613 1164 aa6.71□□□□□ -1.34
CSTF3-201ENST00000323959 NCOA6Q14686 2063 aaPredicted RBP6.71□□□□□ -1.34
CSTF3-201ENST00000323959 C1QTNF3-AMACRE9PGA6 284 aa6.7□□□□□ -1.34
CSTF3-201ENST00000323959 NUDT21O43809 227 aaKnown RBP6.7□□□□□ -1.34
CSTF3-201ENST00000323959 STC2O76061 302 aa6.7□□□□□ -1.34
CSTF3-201ENST00000323959 TMEM253P0C7T8 217 aa6.7□□□□□ -1.34
CSTF3-201ENST00000323959 THRAP10827 490 aa6.7□□□□□ -1.34
CSTF3-201ENST00000323959 HLA-FP30511 346 aa6.7□□□□□ -1.34
CSTF3-201ENST00000323959 CYP2J2P51589 502 aa6.7□□□□□ -1.34
CSTF3-201ENST00000323959 TRAPPC11Q7Z392 1133 aa6.7□□□□□ -1.34
CSTF3-201ENST00000323959 LRRC52Q8N7C0 313 aa6.7□□□□□ -1.34
CSTF3-201ENST00000323959 POMGNT1Q8WZA1 660 aa6.7□□□□□ -1.34
CSTF3-201ENST00000323959 ANKRD7Q92527 254 aa6.7□□□□□ -1.34
CSTF3-201ENST00000323959 TMEM121Q9BTD3 319 aa6.7□□□□□ -1.34
CSTF3-201ENST00000323959 NUDT9Q9BW91 350 aa6.7□□□□□ -1.34
CSTF3-201ENST00000323959 CLPBQ9H078 707 aa6.7□□□□□ -1.34
CSTF3-201ENST00000323959 RAB20Q9NX57 234 aa6.7□□□□□ -1.34
CSTF3-201ENST00000323959 DNAJC12Q9UKB3 198 aa6.7□□□□□ -1.34
CSTF3-201ENST00000323959 JRKLQ9Y4A0 524 aa6.7□□□□□ -1.34
CSTF3-201ENST00000323959 MT-ND3P03897 115 aa6.7□□□□□ -1.34
CSTF3-201ENST00000323959 TSHRP16473 764 aa6.7□□□□□ -1.34
CSTF3-201ENST00000323959 PTPN1P18031 435 aaKnown RBP6.7□□□□□ -1.34
CSTF3-201ENST00000323959 CASQ1P31415 396 aa6.7□□□□□ -1.34
CSTF3-201ENST00000323959 GLRBP48167 497 aa6.7□□□□□ -1.34
CSTF3-201ENST00000323959 SLC20A2Q08357 652 aa6.7□□□□□ -1.34
CSTF3-201ENST00000323959 KIF5AQ12840 1032 aa6.7□□□□□ -1.34
CSTF3-201ENST00000323959 ARHGEF7Q14155 803 aa6.7□□□□□ -1.34
CSTF3-201ENST00000323959 TRIM72Q6ZMU5 477 aa6.7□□□□□ -1.34
CSTF3-201ENST00000323959 CBWD2Q8IUF1 395 aa6.7□□□□□ -1.34
CSTF3-201ENST00000323959 CXorf38Q8TB03 319 aa6.7□□□□□ -1.34
CSTF3-201ENST00000323959 C16orf45Q96MC5 204 aaPredicted RBP6.7□□□□□ -1.34
CSTF3-201ENST00000323959 NAPGQ99747 312 aaPredicted RBP6.7□□□□□ -1.34
CSTF3-201ENST00000323959 GPR87Q9BY21 358 aa6.7□□□□□ -1.34
CSTF3-201ENST00000323959 DNAJB12Q9NXW2 375 aaKnown RBP6.7□□□□□ -1.34
CSTF3-201ENST00000323959 NAGPAQ9UK23 515 aa6.7□□□□□ -1.34
CSTF3-201ENST00000323959 NOCTQ9UK39 431 aaKnown RBP6.7□□□□□ -1.34
CSTF3-201ENST00000323959 TTC7AQ9ULT0 858 aaPredicted RBP6.7□□□□□ -1.34
CSTF3-201ENST00000323959 ERVW-1Q9UQF0 538 aa6.7□□□□□ -1.34
CSTF3-201ENST00000323959 ARGFXA6NJG6 315 aa6.69□□□□□ -1.34
CSTF3-201ENST00000323959 EFCAB8A8MWE9 144 aa6.69□□□□□ -1.34
CSTF3-201ENST00000323959 SHOX2O60902 331 aaPredicted RBP6.69□□□□□ -1.34
CSTF3-201ENST00000323959 KATNA1O75449 491 aa6.69□□□□□ -1.34
CSTF3-201ENST00000323959 SLU7O95391 586 aaKnown RBP6.69□□□□□ -1.34
CSTF3-201ENST00000323959 ALPPP05187 535 aa6.69□□□□□ -1.34
CSTF3-201ENST00000323959 CD19P15391 556 aa6.69□□□□□ -1.34
CSTF3-201ENST00000323959 HOXD9P28356 352 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms