RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 CYB5AP00167 134 aa12.65□□□□□ -0.38
FN1-201ENST00000323926 HLA-DQA2P01906 255 aa12.65□□□□□ -0.38
FN1-201ENST00000323926 ELFN1P0C7U0 828 aa12.65□□□□□ -0.38
FN1-201ENST00000323926 PSMA1P25786 263 aaKnown RBP12.65□□□□□ -0.38
FN1-201ENST00000323926 BLKP51451 505 aa12.65□□□□□ -0.38
FN1-201ENST00000323926 RTL4Q6ZR62 310 aa12.65□□□□□ -0.38
FN1-201ENST00000323926 LINC00471Q8N535 108 aa12.65□□□□□ -0.38
FN1-201ENST00000323926 BHLHE22Q8NFJ8 381 aaPredicted RBP12.65□□□□□ -0.38
FN1-201ENST00000323926 WDR18Q9BV38 432 aa12.65□□□□□ -0.38
FN1-201ENST00000323926 IRX2Q9BZI1 471 aaPredicted RBP12.65□□□□□ -0.38
FN1-201ENST00000323926 KCNMB3Q9NPA1 279 aa12.65□□□□□ -0.38
FN1-201ENST00000323926 CAPN14A8MX76 684 aa12.65□□□□□ -0.38
FN1-201ENST00000323926 GTPBP1O00178 669 aaKnown RBP12.65□□□□□ -0.38
FN1-201ENST00000323926 AMD1P17707 334 aa12.65□□□□□ -0.38
FN1-201ENST00000323926 DNAJB1P25685 340 aa12.65□□□□□ -0.38
FN1-201ENST00000323926 POLLQ9UGP5 575 aa12.65□□□□□ -0.38
FN1-201ENST00000323926 ADGRE2Q9UHX3 823 aa12.65□□□□□ -0.38
FN1-201ENST00000323926 ZBTB12Q9Y330 459 aaPredicted RBP12.65□□□□□ -0.38
FN1-201ENST00000323926 SMCHD1A6NHR9 2005 aa12.65□□□□□ -0.38
FN1-201ENST00000323926 TCRBV5S4A2TA0A5A2 114 aa12.65□□□□□ -0.38
FN1-201ENST00000323926 HGFP14210 728 aa12.65□□□□□ -0.38
FN1-201ENST00000323926 RHAGQ02094 409 aa12.65□□□□□ -0.38
FN1-201ENST00000323926 FAR1Q8WVX9 515 aa12.65□□□□□ -0.38
FN1-201ENST00000323926 ELMO1Q92556 727 aa12.65□□□□□ -0.38
FN1-201ENST00000323926 FCGR1BQ92637 280 aa12.65□□□□□ -0.38
FN1-201ENST00000323926 B4GALT4O60513 344 aa12.65□□□□□ -0.38
FN1-201ENST00000323926 NR2F1P10589 423 aa12.65□□□□□ -0.38
FN1-201ENST00000323926 GPR1P46091 355 aa12.65□□□□□ -0.38
FN1-201ENST00000323926 LCN1P1Q5VSP4 162 aa12.65□□□□□ -0.38
FN1-201ENST00000323926 PCDHGB1Q9Y5G3 927 aa12.65□□□□□ -0.38
FN1-201ENST00000323926 PBLDP30039 288 aaPredicted RBP12.65□□□□□ -0.38
FN1-201ENST00000323926 YBEYP58557 167 aaPredicted RBP12.65□□□□□ -0.38
FN1-201ENST00000323926 C9orf131Q5VYM1 1079 aa12.65□□□□□ -0.38
FN1-201ENST00000323926 TCF12Q99081 682 aa12.65□□□□□ -0.38
FN1-201ENST00000323926 PCDHGB7Q9Y5F8 929 aa12.65□□□□□ -0.38
FN1-201ENST00000323926 MDM4O15151 490 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 ARP10275 920 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 CCNFP41002 786 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 GABRB2P47870 512 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 ITPK1Q13572 414 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 ZSWIM2Q8NEG5 633 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 STYXQ8WUJ0 223 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 ACSS3Q9H6R3 686 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 RABL2AQ9UBK7 228 aaPredicted RBP12.64□□□□□ -0.39
FN1-201ENST00000323926 RABL2BQ9UNT1 228 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 DHRS12A0PJE2 317 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 DCXO43602 365 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 TLX3O43711 291 aaPredicted RBP12.64□□□□□ -0.39
FN1-201ENST00000323926 PQBP1O60828 265 aaKnown RBP12.64□□□□□ -0.39
FN1-201ENST00000323926 CCDC166P0CW27 439 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 HNRNPH3P31942 346 aaKnown RBP12.64□□□□□ -0.39
FN1-201ENST00000323926 CAMK1Q14012 370 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 NOMO2Q5JPE7 1267 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 SLX4Q8IY92 1834 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 A0A0B4J269 797 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 TPP1O14773 563 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 RFTN1Q14699 578 aaPredicted RBP12.64□□□□□ -0.39
FN1-201ENST00000323926 FAM153CQ494X1 144 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 RALGPS1Q5JS13 557 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 CPNE9Q8IYJ1 553 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 ATG4AQ8WYN0 398 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 RNPEPQ9H4A4 650 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 SEC14L4Q9UDX3 406 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 CLDN4O14493 209 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 UNC5CO95185 931 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 RFX3P48380 749 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 MPPE1Q53F39 396 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 VSIG10LQ86VR7 867 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 DNAJB3Q8WWF6 145 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 COQ7Q99807 217 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 EIF2B3Q9NR50 452 aaKnown RBP12.64□□□□□ -0.39
FN1-201ENST00000323926 SCN3AQ9NY46 2000 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 C1orf232A0A0U1RR37 186 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 SNAP23O00161 211 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 XKRYO14609 159 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 LCA5LO95447 670 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 DDX6P26196 483 aaKnown RBP eCLIP12.64□□□□□ -0.391e-11■■■■□ 22.1
FN1-201ENST00000323926 VARSP26640 1264 aaKnown RBP12.64□□□□□ -0.39
FN1-201ENST00000323926 BBS12Q6ZW61 710 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 C1orf186Q6ZWK4 172 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 TSPAN14Q8NG11 270 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 NXF3Q9H4D5 531 aaKnown RBP12.64□□□□□ -0.39
FN1-201ENST00000323926 COPS7AQ9UBW8 275 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 GNEQ9Y223 722 aaKnown RBP12.64□□□□□ -0.39
FN1-201ENST00000323926 OR10H1Q9Y4A9 318 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 KHDRBS3O75525 346 aaKnown RBP12.64□□□□□ -0.39
FN1-201ENST00000323926 CHST15Q7LFX5 561 aaPredicted RBP12.64□□□□□ -0.39
FN1-201ENST00000323926 OFCC1Q8IZS5 231 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 PLD4Q96BZ4 506 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 GMEB1Q9Y692 573 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 CHURC1-FNTBB4DL54 471 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 CAPN1P07384 714 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 CACNA2D1P54289 1103 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 RASGEF1BQ0VAM2 473 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 CAPN13Q6MZZ7 669 aaPredicted RBP12.64□□□□□ -0.39
FN1-201ENST00000323926 C17orf64Q86WR6 236 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 HIPK1Q86Z02 1210 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 FNDC11Q9BVV2 318 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 GPRC5CQ9NQ84 441 aa12.64□□□□□ -0.39
FN1-201ENST00000323926 PHPT1Q9NRX4 125 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms