RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 AP1S1P61966 158 aa18.46■□□□□ 0.55
USP39-201ENST00000323701 OVGP1Q12889 678 aa18.46■□□□□ 0.55
USP39-201ENST00000323701 IFT88Q13099 833 aa18.46■□□□□ 0.55
USP39-201ENST00000323701 SLC12A1Q13621 1099 aa18.46■□□□□ 0.55
USP39-201ENST00000323701 UGP2Q16851 508 aa18.46■□□□□ 0.55
USP39-201ENST00000323701 CENPLQ8N0S6 344 aaPredicted RBP18.46■□□□□ 0.55
USP39-201ENST00000323701 TTC30BQ8N4P2 665 aa18.46■□□□□ 0.55
USP39-201ENST00000323701 OR2AP1Q8NGE2 309 aa18.46■□□□□ 0.55
USP39-201ENST00000323701 ELMO2Q96JJ3 720 aa18.46■□□□□ 0.55
USP39-201ENST00000323701 ASB16Q96NS5 453 aa18.46■□□□□ 0.55
USP39-201ENST00000323701 NSRP1Q9H0G5 558 aaKnown RBP18.46■□□□□ 0.55
USP39-201ENST00000323701 DUS2Q9NX74 493 aaKnown RBP18.46■□□□□ 0.55
USP39-201ENST00000323701 FNDC3AQ9Y2H6 1198 aaKnown RBP18.46■□□□□ 0.55
USP39-201ENST00000323701 CRYL1Q9Y2S2 319 aa18.46■□□□□ 0.55
USP39-201ENST00000323701 CD3EAPO15446 510 aaKnown RBP18.45■□□□□ 0.54
USP39-201ENST00000323701 CRTAMO95727 393 aa18.45■□□□□ 0.54
USP39-201ENST00000323701 SEMG2Q02383 582 aa18.45■□□□□ 0.54
USP39-201ENST00000323701 HYAL1Q12794 435 aa18.45■□□□□ 0.54
USP39-201ENST00000323701 DLG1Q12959 904 aa18.45■□□□□ 0.54
USP39-201ENST00000323701 PCLAFQ15004 111 aa18.45■□□□□ 0.54
USP39-201ENST00000323701 EML3Q32P44 896 aa18.45■□□□□ 0.54
USP39-201ENST00000323701 C22orf39Q6P5X5 142 aa18.45■□□□□ 0.54
USP39-201ENST00000323701 SYCE2Q6PIF2 218 aa18.45■□□□□ 0.54
USP39-201ENST00000323701 KYAT3Q6YP21 454 aaKnown RBP18.45■□□□□ 0.54
USP39-201ENST00000323701 ATG14Q6ZNE5 492 aa18.45■□□□□ 0.54
USP39-201ENST00000323701 KIAA0408Q6ZU52 694 aa18.45■□□□□ 0.54
USP39-201ENST00000323701 RAPH1Q70E73 1250 aa18.45■□□□□ 0.54
USP39-201ENST00000323701 GET4Q7L5D6 327 aaPredicted RBP18.45■□□□□ 0.54
USP39-201ENST00000323701 SPATA21Q7Z572 469 aa18.45■□□□□ 0.54
USP39-201ENST00000323701 RYBPQ8N488 228 aaPredicted RBP18.45■□□□□ 0.54
USP39-201ENST00000323701 CCDC197Q8NCU1 140 aa18.45■□□□□ 0.54
USP39-201ENST00000323701 CYB5D2Q8WUJ1 264 aa18.45■□□□□ 0.54
USP39-201ENST00000323701 MYO19Q96H55 970 aa18.45■□□□□ 0.54
USP39-201ENST00000323701 MARK1Q9P0L2 795 aa18.45■□□□□ 0.54
USP39-201ENST00000323701 HTRA2O43464 458 aaPredicted RBP18.45■□□□□ 0.54
USP39-201ENST00000323701 CHI3L2Q15782 390 aa18.45■□□□□ 0.54
USP39-201ENST00000323701 ACCSLQ4AC99 568 aa18.45■□□□□ 0.54
USP39-201ENST00000323701 ZNF549Q6P9A3 640 aa18.45■□□□□ 0.54
USP39-201ENST00000323701 ELMSAN1Q6PJG2 1045 aa18.45■□□□□ 0.54
USP39-201ENST00000323701 LYSMD3Q7Z3D4 306 aa18.45■□□□□ 0.54
USP39-201ENST00000323701 TMEM151AQ8N4L1 468 aa18.45■□□□□ 0.54
USP39-201ENST00000323701 OR4L1Q8NH43 312 aa18.45■□□□□ 0.54
USP39-201ENST00000323701 CALML6Q8TD86 181 aa18.45■□□□□ 0.54
USP39-201ENST00000323701 KCTD4Q8WVF5 259 aa18.45■□□□□ 0.54
USP39-201ENST00000323701 PEX13Q92968 403 aa18.45■□□□□ 0.54
USP39-201ENST00000323701 LMAN2LQ9H0V9 348 aa18.45■□□□□ 0.54
USP39-201ENST00000323701 FKBPLQ9UIM3 349 aa18.45■□□□□ 0.54
USP39-201ENST00000323701 MPOP05164 745 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 SBK3P0C264 359 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 FSHRP23945 695 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 ALDH3A1P30838 453 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 CDKN2DP55273 166 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 ECT2LQ008S8 904 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 BST1Q10588 318 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 RAB30Q15771 203 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 SPRED3Q2MJR0 410 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 FASTKD1Q53R41 847 aaKnown RBP18.44■□□□□ 0.54
USP39-201ENST00000323701 ARMC12Q5T9G4 340 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 DPY19L3Q6ZPD9 716 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 Q6ZVU0 165 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 KIAA0907Q7Z7F0 614 aaPredicted RBP18.44■□□□□ 0.54
USP39-201ENST00000323701 NUDCD3Q8IVD9 361 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 PIANPQ8IYJ0 282 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 CHST14Q8NCH0 376 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 OSCP1Q8WVF1 389 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 OTUB2Q96DC9 234 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 MRPL38Q96DV4 380 aaKnown RBP18.44■□□□□ 0.54
USP39-201ENST00000323701 CABS1Q96KC9 395 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 MTG2Q9H4K7 406 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 EBF3Q9H4W6 596 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 RIMKLBQ9ULI2 386 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 USP15Q9Y4E8 981 aaPredicted RBP18.44■□□□□ 0.54
USP39-201ENST00000323701 A8MX80 341 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 PSMA3P25788 255 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 GLRBP48167 497 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 CSNK1DP48730 415 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 EPHB1P54762 984 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 RAB10P61026 200 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 TIAL1Q01085 375 aaKnown RBP eCLIP18.44■□□□□ 0.54
USP39-201ENST00000323701 BCL2L1Q07817 233 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 INSCQ1MX18 579 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 RALGPS1Q5JS13 557 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 MBLAC2Q68D91 279 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 NAIF1Q69YI7 327 aaPredicted RBP18.44■□□□□ 0.54
USP39-201ENST00000323701 C10orf107Q8IVU9 208 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 RMDN2Q96LZ7 410 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 FAM96AQ9H5X1 160 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 CPSF2Q9P2I0 782 aaKnown RBP18.44■□□□□ 0.54
USP39-201ENST00000323701 ZMYM5Q9UJ78 669 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 STARD13Q9Y3M8 1113 aa18.44■□□□□ 0.54
USP39-201ENST00000323701 C2orf81A6NN90 581 aa18.43■□□□□ 0.54
USP39-201ENST00000323701 IGSF6O95976 241 aa18.43■□□□□ 0.54
USP39-201ENST00000323701 CISD3P0C7P0 127 aa18.43■□□□□ 0.54
USP39-201ENST00000323701 NEFHP12036 1026 aa18.43■□□□□ 0.54
USP39-201ENST00000323701 LPOP22079 712 aaPredicted RBP18.43■□□□□ 0.54
USP39-201ENST00000323701 FCARP24071 287 aa18.43■□□□□ 0.54
USP39-201ENST00000323701 MAGEA9P43362 315 aa18.43■□□□□ 0.54
USP39-201ENST00000323701 GAB4Q2WGN9 574 aa18.43■□□□□ 0.54
USP39-201ENST00000323701 MYLK3Q32MK0 819 aa18.43■□□□□ 0.54
USP39-201ENST00000323701 GPR149Q86SP6 731 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms