RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 CCDC162PA2VCL2 907 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 GOLGA8CPA6NN73 597 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 ABLIM3O94929 683 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 BAG2O95816 211 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 C1RP00736 705 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 CDKN1CP49918 316 aaPredicted RBP12.47□□□□□ -0.41
RNF4-201ENST00000314289 RPS6KA3P51812 740 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 SLC25A3Q00325 362 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 PDCD2Q16342 344 aaPredicted RBP12.47□□□□□ -0.41
RNF4-201ENST00000314289 FBXO48Q5FWF7 155 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 GPR158Q5T848 1215 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 TMEM207Q6UWW9 146 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 TXNDC5Q8NBS9 432 aaKnown RBP12.47□□□□□ -0.41
RNF4-201ENST00000314289 ZNF784Q8NCA9 323 aaPredicted RBP12.47□□□□□ -0.41
RNF4-201ENST00000314289 WFDC5Q8TCV5 224 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 PAWRQ96IZ0 340 aaKnown RBP12.47□□□□□ -0.41
RNF4-201ENST00000314289 SMG9Q9H0W8 520 aaKnown RBP12.47□□□□□ -0.41
RNF4-201ENST00000314289 BACE2Q9Y5Z0 518 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 EFEMP2O95967 443 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 KPNA1P52294 538 aaPredicted RBP12.46□□□□□ -0.41
RNF4-201ENST00000314289 RABGAP1LQ5R372 815 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 HECTD2Q5U5R9 776 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 ZYG11AQ6WRX3 759 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 TMC7Q7Z402 723 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 RNF168Q8IYW5 571 aaPredicted RBP12.46□□□□□ -0.41
RNF4-201ENST00000314289 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.46□□□□□ -0.41
RNF4-201ENST00000314289 LPCAT1Q8NF37 534 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 OR6Y1Q8NGX8 325 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 TTC1Q99614 292 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 ZNF184Q99676 751 aaPredicted RBP12.46□□□□□ -0.41
RNF4-201ENST00000314289 BEGAINQ9BUH8 593 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 FAM96AQ9H5X1 160 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 FNIP2Q9P278 1114 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 TBX21Q9UL17 535 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 MAGEA13PA6NCF6 341 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 MROH6A6NGR9 719 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 H0Y626 953 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 K7ERQ8 282 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 TEX28O15482 410 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 TBL1XO60907 577 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 KLHL2O95198 593 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 MT-CO1P00395 513 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 URODP06132 367 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 SERPINA6P08185 405 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 CSRP3P50461 194 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 CDH4P55283 916 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 ADGRF1Q5T601 910 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 LIPMQ5VYY2 423 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 TMEM198Q66K66 360 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 CNKSR3Q6P9H4 555 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 SLC39A11Q8N1S5 342 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 CFAP61Q8NHU2 1237 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 STYXQ8WUJ0 223 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 PTCD2Q8WV60 388 aaKnown RBP12.46□□□□□ -0.41
RNF4-201ENST00000314289 THTPAQ9BU02 230 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 CDH19Q9H159 772 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 POMKQ9H5K3 350 aa12.46□□□□□ -0.41
RNF4-201ENST00000314289 STX18Q9P2W9 335 aaKnown RBP12.46□□□□□ -0.41
RNF4-201ENST00000314289 FCF1Q9Y324 198 aaKnown RBP12.46□□□□□ -0.41
RNF4-201ENST00000314289 MYOFQ9NZM1 2061 aa12.46□□□□□ -0.42
RNF4-201ENST00000314289 CHD9Q3L8U1 2897 aa12.46□□□□□ -0.42
RNF4-201ENST00000314289 UBA6A0AVT1 1052 aaPredicted RBP12.46□□□□□ -0.42
RNF4-201ENST00000314289 ANKRD33BA6NCL7 494 aa12.46□□□□□ -0.42
RNF4-201ENST00000314289 ZBTB14O43829 449 aa12.46□□□□□ -0.42
RNF4-201ENST00000314289 SORBS2O94875 1100 aaKnown RBP12.46□□□□□ -0.42
RNF4-201ENST00000314289 S1PR4O95977 384 aa12.46□□□□□ -0.42
RNF4-201ENST00000314289 KCNC1P48547 511 aa12.46□□□□□ -0.42
RNF4-201ENST00000314289 VEPH1Q14D04 833 aa12.46□□□□□ -0.42
RNF4-201ENST00000314289 LRRC26Q2I0M4 334 aa12.46□□□□□ -0.42
RNF4-201ENST00000314289 ATXN7L2Q5T6C5 722 aaPredicted RBP12.46□□□□□ -0.42
RNF4-201ENST00000314289 IZUMO2Q6UXV1 221 aa12.46□□□□□ -0.42
RNF4-201ENST00000314289 APLFQ8IW19 511 aaPredicted RBP12.46□□□□□ -0.42
RNF4-201ENST00000314289 YME1L1Q96TA2 773 aa12.46□□□□□ -0.42
RNF4-201ENST00000314289 TM6SF2Q9BZW4 377 aa12.46□□□□□ -0.42
RNF4-201ENST00000314289 ALG9Q9H6U8 611 aa12.46□□□□□ -0.42
RNF4-201ENST00000314289 MRM3Q9HC36 420 aaKnown RBP12.46□□□□□ -0.42
RNF4-201ENST00000314289 TARM1B6A8C7 271 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 SERPINB5P36952 375 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 DSG1Q02413 1049 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 KRT72Q14CN4 511 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 NXNQ6DKJ4 435 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 TPGS1Q6ZTW0 290 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 OR4K2Q8NGD2 314 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 PPP1R2P1Q96PQ5 205 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 MAGEH1Q9H213 219 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 IGSF5Q9NSI5 407 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 TSR3Q9UJK0 312 aaKnown RBP12.45□□□□□ -0.42
RNF4-201ENST00000314289 PACSIN3Q9UKS6 424 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 VWA7Q9Y334 891 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 REV3LO60673 3130 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 ZBBXA8MT70 800 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 HDCP19113 662 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 GKP32189 559 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 LEPRP48357 1165 aaKnown RBP12.45□□□□□ -0.42
RNF4-201ENST00000314289 ARF5P84085 180 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 LAMB3Q13751 1172 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 CYTH1Q15438 398 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 RALGPS1Q5JS13 557 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 CXorf57Q6NSI4 855 aaKnown RBP12.45□□□□□ -0.42
RNF4-201ENST00000314289 HS6ST3Q8IZP7 471 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms